RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 IFITM10A6NMD0 228 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 USP17L23D6RBM5 183 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST1H2BKO60814 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 ATP5LO75964 103 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST1H2BJP06899 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST1H2BOP23527 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST1H2BBP33778 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 XCL1P47992 114 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST1H2BDP58876 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 SNRPEP62304 92 aaKnown RBP4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST1H2BCP62807 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 FOXI1Q12951 378 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST2H2BEQ16778 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 SPINK6Q6UWN8 80 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 FAM19A3Q7Z5A8 133 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 BAGE3Q86Y29 109 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST1H2BHQ93079 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 URB1-AS1Q96HZ7 61 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST1H2BNQ99877 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST1H2BMQ99879 126 aa4.46□□□□□ -1.7
PTCHD3P1-201ENST00000612350 IGHV1-58A0A0C4DH39 117 aa4.45□□□□□ -1.7
PTCHD3P1-201ENST00000612350 C5orf52A6NGY3 159 aa4.45□□□□□ -1.7
PTCHD3P1-201ENST00000612350 COX7A2LO14548 114 aa4.45□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HSBP1O75506 76 aa4.45□□□□□ -1.7
PTCHD3P1-201ENST00000612350 APOMO95445 188 aa4.45□□□□□ -1.7
PTCHD3P1-201ENST00000612350 UBE2D1P51668 147 aa4.45□□□□□ -1.7
PTCHD3P1-201ENST00000612350 RNASE13Q5GAN3 156 aaKnown RBP4.45□□□□□ -1.7
PTCHD3P1-201ENST00000612350 LINC01561Q8N1V8 128 aa4.45□□□□□ -1.7
PTCHD3P1-201ENST00000612350 OPRPNQ99935 248 aaPredicted RBP4.45□□□□□ -1.7
PTCHD3P1-201ENST00000612350 A0A096LNJ9 63 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 GVQW2A0A096LPI5 108 aaPredicted RBP4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 IGHV3OR16-9A0A0B4J2B5 98 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 F8WDY8 70 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 PRSS1P07477 247 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 SMIM6P0DI80 62 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 MALP21145 153 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 CNBPP62633 177 aaKnown RBP4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HERVK_113P63121 156 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 PMVKQ15126 192 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 PDZD11Q5EBL8 140 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 LINC00242Q5T6M2 205 aa4.44□□□□□ -1.7
PTCHD3P1-201ENST00000612350 A0A087WZ39 114 aa4.43□□□□□ -1.7
PTCHD3P1-201ENST00000612350 hDV102S1A0JD36 115 aa4.43□□□□□ -1.7
PTCHD3P1-201ENST00000612350 LINC00173Q6ZV60 143 aa4.43□□□□□ -1.7
PTCHD3P1-201ENST00000612350 C15orf56Q8N910 161 aa4.43□□□□□ -1.7
PTCHD3P1-201ENST00000612350 OR10D4PQ8NGN7 298 aa4.43□□□□□ -1.7
PTCHD3P1-201ENST00000612350 CST9LQ9H4G1 147 aa4.43□□□□□ -1.7
PTCHD3P1-201ENST00000612350 PLAC8Q9NZF1 115 aa4.43□□□□□ -1.7
PTCHD3P1-201ENST00000612350 PKIGQ9Y2B9 76 aa4.43□□□□□ -1.7
PTCHD3P1-201ENST00000612350 TRAV12-1A0A0B4J245 112 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 TINCRA0A1B0GVN0 87 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 ZNF561-AS1K7EIQ3 104 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 SERF1AO75920 110 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 FABP4P15090 132 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 PMCHL1Q16048 86 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 PRR4Q16378 134 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 COA6Q5JTJ3 125 aaKnown RBP4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HIST3H2BBQ8N257 126 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 C2orf48Q96LS8 159 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 PACRGQ96M98 296 aaPredicted RBP4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 GEMIN7Q9H840 131 aaKnown RBP4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 HSPB8Q9UJY1 196 aa4.42□□□□□ -1.7
PTCHD3P1-201ENST00000612350 IGHV3-64A0A075B6Q5 118 aa4.41□□□□□ -1.7
PTCHD3P1-201ENST00000612350 IGLV5-45A0A087WSX0 123 aa4.41□□□□□ -1.7
PTCHD3P1-201ENST00000612350 LEPROTL1O95214 131 aa4.41□□□□□ -1.7
PTCHD3P1-201ENST00000612350 SLPIP03973 132 aa4.41□□□□□ -1.7
PTCHD3P1-201ENST00000612350 CHTF8P0CG12 524 aa4.41□□□□□ -1.7
PTCHD3P1-201ENST00000612350 C5orf38Q86SI9 138 aa4.41□□□□□ -1.7
PTCHD3P1-201ENST00000612350 SPACA4Q8TDM5 124 aa4.41□□□□□ -1.7
PTCHD3P1-201ENST00000612350 IFI27L1Q96BM0 104 aa4.41□□□□□ -1.7
PTCHD3P1-201ENST00000612350 DPH3Q96FX2 82 aa4.41□□□□□ -1.7
PTCHD3P1-201ENST00000612350 H3BRM9 83 aa4.4□□□□□ -1.71
PTCHD3P1-201ENST00000612350 IGLC3P0DOY3 106 aa4.4□□□□□ -1.71
PTCHD3P1-201ENST00000612350 S100A12P80511 92 aa4.4□□□□□ -1.71
PTCHD3P1-201ENST00000612350 COX6A2Q02221 97 aa4.4□□□□□ -1.71
PTCHD3P1-201ENST00000612350 ZC2HC1BQ5TFG8 222 aa4.4□□□□□ -1.71
PTCHD3P1-201ENST00000612350 FAM19A2Q8N3H0 131 aa4.4□□□□□ -1.71
PTCHD3P1-201ENST00000612350 C12orf57Q99622 126 aa4.4□□□□□ -1.71
PTCHD3P1-201ENST00000612350 IGLV4-69A0A075B6H9 119 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 SPAG11BQ08648 103 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 SYCNQ0VAF6 134 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 RNF151Q2KHN1 245 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 HIGD2BQ4VC39 106 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 Q8IZM0 81 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 LINC00518Q8N0U6 118 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 LINC00469Q8N7U9 141 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 ORAOV1Q8WV07 137 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 CARD19Q96LW7 228 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 HIST1H2BLQ99880 126 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 CDKN2A-AS1Q9UH64 79 aa4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 CHTOPQ9Y3Y2 248 aaKnown RBP4.39□□□□□ -1.71
PTCHD3P1-201ENST00000612350 C20orf202A1L168 122 aa4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 F8VRH5 84 aa4.38□□□□□ -1.71
PTCHD3P1-201ENST00000612350 NDUFA1O15239 70 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms