RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 Q8IZM0 81 aa16.35■□□□□ 0.21
VEGFA-226ENST00000611736 CKS1BP61024 79 aa16.34■□□□□ 0.21
VEGFA-226ENST00000611736 CHCHD1Q96BP2 118 aaKnown RBP16.34■□□□□ 0.21
VEGFA-226ENST00000611736 IGLV5-45A0A087WSX0 123 aa16.33■□□□□ 0.2
VEGFA-226ENST00000611736 TRBV30A0A0K0K1B3 111 aa16.33■□□□□ 0.2
VEGFA-226ENST00000611736 SMIM1B2RUZ4 78 aa16.32■□□□□ 0.2
VEGFA-226ENST00000611736 ATP5LO75964 103 aa16.32■□□□□ 0.2
VEGFA-226ENST00000611736 Q6ZRP5 223 aa16.32■□□□□ 0.2
VEGFA-226ENST00000611736 A0A1W2PNN7 141 aa16.31■□□□□ 0.2
VEGFA-226ENST00000611736 TLX1NBP0CAT3 122 aa16.31■□□□□ 0.2
VEGFA-226ENST00000611736 C9orf116Q5BN46 136 aaPredicted RBP16.31■□□□□ 0.2
VEGFA-226ENST00000611736 BAGE3Q86Y29 109 aa16.31■□□□□ 0.2
VEGFA-226ENST00000611736 COLCA2A8K830 154 aa16.3■□□□□ 0.2
VEGFA-226ENST00000611736 SPINK8P0C7L1 97 aa16.3■□□□□ 0.2
VEGFA-226ENST00000611736 HNRNPA3P51991 378 aaKnown RBP16.3■□□□□ 0.2
VEGFA-226ENST00000611736 GAGE2EQ4V326 116 aa16.3■□□□□ 0.2
VEGFA-226ENST00000611736 GAGE2DQ9UEU5 116 aa16.3■□□□□ 0.2
VEGFA-226ENST00000611736 IGLC3P0DOY3 106 aa16.29■□□□□ 0.2
VEGFA-226ENST00000611736 LRP1Q07954 4544 aaKnown RBP16.28■□□□□ 0.2
VEGFA-226ENST00000611736 FAT3Q8TDW7 4589 aa16.27■□□□□ 0.2
VEGFA-226ENST00000611736 COX7B2Q8TF08 81 aa16.27■□□□□ 0.2
VEGFA-226ENST00000611736 H3BRM9 83 aa16.26■□□□□ 0.19
VEGFA-226ENST00000611736 SCO1O75880 301 aa16.26■□□□□ 0.19
VEGFA-226ENST00000611736 NDUFC2-KCTD14E9PQ53 114 aa16.25■□□□□ 0.19
VEGFA-226ENST00000611736 HSBP1O75506 76 aa16.25■□□□□ 0.19
VEGFA-226ENST00000611736 HERC1Q15751 4861 aa16.25■□□□□ 0.19
VEGFA-226ENST00000611736 F8VRH5 84 aa16.24■□□□□ 0.19
VEGFA-226ENST00000611736 CXCL5P42830 114 aa16.24■□□□□ 0.19
VEGFA-226ENST00000611736 FAM19A2Q8N3H0 131 aa16.24■□□□□ 0.19
VEGFA-226ENST00000611736 FAM168BA1KXE4 195 aa16.23■□□□□ 0.19
VEGFA-226ENST00000611736 ZNF22P17026 224 aaPredicted RBP16.23■□□□□ 0.19
VEGFA-226ENST00000611736 PRR3P79522 188 aaKnown RBP16.23■□□□□ 0.19
VEGFA-226ENST00000611736 IFI27L1Q96BM0 104 aa16.23■□□□□ 0.19
VEGFA-226ENST00000611736 C11orf86A6NJI1 115 aa16.2■□□□□ 0.18
VEGFA-226ENST00000611736 SERF1AO75920 110 aa16.2■□□□□ 0.18
VEGFA-226ENST00000611736 PHF5AQ7RTV0 110 aaKnown RBP16.2■□□□□ 0.18
VEGFA-226ENST00000611736 FAM19A5Q7Z5A7 132 aaPredicted RBP16.2■□□□□ 0.18
VEGFA-226ENST00000611736 CHTOPQ9Y3Y2 248 aaKnown RBP16.2■□□□□ 0.18
VEGFA-226ENST00000611736 LINC00310P59036 64 aa16.19■□□□□ 0.18
VEGFA-226ENST00000611736 J3QL48 77 aa16.18■□□□□ 0.18
VEGFA-226ENST00000611736 KRTAP29-1A8MX34 341 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-226ENST00000611736 C9orf129Q5T035 196 aaKnown RBP16.17■□□□□ 0.18
VEGFA-226ENST00000611736 TMEM170BQ5T4T1 132 aa16.17■□□□□ 0.18
VEGFA-226ENST00000611736 IGLV5-39A0A0G2JS06 123 aa16.16■□□□□ 0.18
VEGFA-226ENST00000611736 TRAV12-1A0A0B4J245 112 aa16.15■□□□□ 0.18
VEGFA-226ENST00000611736 KRTAP7-1Q8IUC3 87 aa16.14■□□□□ 0.17
VEGFA-226ENST00000611736 XAGE1AQ9HD64 81 aa16.14■□□□□ 0.17
VEGFA-226ENST00000611736 NUPR1O60356 82 aa16.13■□□□□ 0.17
VEGFA-226ENST00000611736 H0Y8G0 127 aa16.11■□□□□ 0.17
VEGFA-226ENST00000611736 M0QXV9 152 aa16.11■□□□□ 0.17
VEGFA-226ENST00000611736 LEPROTL1O95214 131 aa16.11■□□□□ 0.17
VEGFA-226ENST00000611736 OXTP01178 125 aa16.1■□□□□ 0.17
VEGFA-226ENST00000611736 PSORS1C2Q9UIG4 136 aa16.1■□□□□ 0.17
VEGFA-226ENST00000611736 FABP4P15090 132 aa16.07■□□□□ 0.16
VEGFA-226ENST00000611736 SERTAD4-AS1Q5TG53 156 aa16.07■□□□□ 0.16
VEGFA-226ENST00000611736 HSPB8Q9UJY1 196 aa16.06■□□□□ 0.16
VEGFA-226ENST00000611736 TMEM223A0PJW6 202 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST1H2BKO60814 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST1H2BJP06899 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST1H2BOP23527 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST1H2BBP33778 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST1H2BDP58876 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST1H2BCP62807 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 ODF1Q14990 250 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST2H2BEQ16778 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 C1orf137Q5JT78 98 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.05■□□□□ 0.16
VEGFA-226ENST00000611736 KRTAP11-1Q8IUC1 163 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST1H2BHQ93079 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST1H2BNQ99877 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 HIST1H2BMQ99879 126 aa16.05■□□□□ 0.16
VEGFA-226ENST00000611736 UBE2BP63146 152 aa16.04■□□□□ 0.16
VEGFA-226ENST00000611736 PFN2P35080 140 aa16.03■□□□□ 0.16
VEGFA-226ENST00000611736 ZNF625Q96I27 306 aaPredicted RBP16.02■□□□□ 0.16
VEGFA-226ENST00000611736 C22orf24Q9Y442 160 aa16.01■□□□□ 0.15
VEGFA-226ENST00000611736 SPINK6Q6UWN8 80 aa16■□□□□ 0.15
VEGFA-226ENST00000611736 ERG28Q9UKR5 140 aa16■□□□□ 0.15
VEGFA-226ENST00000611736 SRSF9Q13242 221 aaKnown RBP eCLIP15.99■□□□□ 0.15
VEGFA-226ENST00000611736 SFTA2Q6UW10 78 aa15.98■□□□□ 0.15
VEGFA-226ENST00000611736 PMCHL2Q9BQD1 86 aa15.96■□□□□ 0.15
VEGFA-226ENST00000611736 PLNP26678 52 aa15.95■□□□□ 0.14
VEGFA-226ENST00000611736 LBHQ53QV2 105 aaPredicted RBP15.95■□□□□ 0.14
VEGFA-226ENST00000611736 MAP1LC3CQ9BXW4 147 aa15.95■□□□□ 0.14
VEGFA-226ENST00000611736 TNXBP22105 4242 aa15.93■□□□□ 0.14
VEGFA-226ENST00000611736 DPM2O94777 84 aa15.93■□□□□ 0.14
VEGFA-226ENST00000611736 IGLV7-43P04211 117 aa15.93■□□□□ 0.14
VEGFA-226ENST00000611736 COX17Q14061 63 aa15.93■□□□□ 0.14
VEGFA-226ENST00000611736 MRPL55Q7Z7F7 128 aaKnown RBP15.93■□□□□ 0.14
VEGFA-226ENST00000611736 TP73-AS1Q9UF72 201 aa15.93■□□□□ 0.14
VEGFA-226ENST00000611736 PLA2G2DQ9UNK4 145 aa15.93■□□□□ 0.14
VEGFA-226ENST00000611736 SND1-IT1Q9HBX3 110 aa15.92■□□□□ 0.14
VEGFA-226ENST00000611736 MT1HL1P0DM35 61 aa15.9■□□□□ 0.14
VEGFA-226ENST00000611736 REG3GQ6UW15 175 aa15.9■□□□□ 0.14
VEGFA-226ENST00000611736 GAGE10A6NGK3 116 aa15.89■□□□□ 0.13
VEGFA-226ENST00000611736 IGKCP01834 107 aa15.89■□□□□ 0.13
VEGFA-226ENST00000611736 LINC00158P58513 81 aa15.89■□□□□ 0.13
VEGFA-226ENST00000611736 NKAPP1Q8N9T2 125 aa15.89■□□□□ 0.13
VEGFA-226ENST00000611736 A0A0U1RRA0 63 aa15.88■□□□□ 0.13
VEGFA-226ENST00000611736 LINC00167Q96N53 147 aa15.88■□□□□ 0.13
VEGFA-226ENST00000611736 NDUFA12Q9UI09 145 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms