RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 LRRK2Q5S007 2527 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 PKD1L2Q7Z442 2459 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 UBE2D3P61077 147 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 UBE2D2P62837 147 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 COX8CQ7Z4L0 72 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 SNURFQ9Y675 71 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 COX7BP24311 80 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 C4orf48Q5BLP8 95 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 RETNQ9HD89 108 aa2.73□□□□□ -1.97
RNF38-210ENST00000611646 TRBV6-4A0A1B0GX49 114 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 RPL37AP8A6NKH3 93 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 IBA57-AS1B1ANH7 110 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 JMJD7-PLA2G4BH0Y9G9 81 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 SMCPP49901 116 aaPredicted RBP2.72□□□□□ -1.97
RNF38-210ENST00000611646 FUSP35637 526 aaKnown RBP eCLIP2.72□□□□□ -1.97
RNF38-210ENST00000611646 Q6ZQY7 126 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 FAM19A5Q7Z5A7 132 aaPredicted RBP2.72□□□□□ -1.97
RNF38-210ENST00000611646 C6orf223Q8N319 242 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 KIF25-AS1Q9Y6Z4 181 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.72□□□□□ -1.97
RNF38-210ENST00000611646 LY6G6DO95868 133 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 MPLKIPQ8TAP9 179 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 J3KT08 172 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 LINC00315P59091 139 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 C5orf47Q569G3 176 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 UNQ6190/PRO20217Q6UXQ8 127 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 HIGD2AQ9BW72 106 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 CDIP1Q9H305 208 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 KLK5Q9Y337 293 aaPredicted RBP2.72□□□□□ -1.97
RNF38-210ENST00000611646 ACANP16112 2415 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 C3orf22Q8N5N4 141 aa2.72□□□□□ -1.97
RNF38-210ENST00000611646 Q8N2B8 174 aa2.71□□□□□ -1.98
RNF38-210ENST00000611646 C11orf45Q8TAV5 145 aa2.71□□□□□ -1.98
RNF38-210ENST00000611646 AMELXQ99217 191 aa2.71□□□□□ -1.98
RNF38-210ENST00000611646 PRR4Q16378 134 aa2.71□□□□□ -1.98
RNF38-210ENST00000611646 DEFB131BA0A096LNP1 70 aa2.71□□□□□ -1.98
RNF38-210ENST00000611646 UQCRQO14949 82 aa2.71□□□□□ -1.98
RNF38-210ENST00000611646 BRI3O95415 125 aa2.71□□□□□ -1.98
RNF38-210ENST00000611646 ANK2Q01484 3957 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 A0A0J9YWU9 116 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 CYSRT1A8MQ03 144 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 TIMM17BO60830 172 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 CCKP06307 115 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 Q8N3U1 123 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 PPDPFQ9H3Y8 114 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 COL27A1Q8IZC6 1860 aaPredicted RBP2.7□□□□□ -1.98
RNF38-210ENST00000611646 USP17L23D6RBM5 183 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 NANOS2P60321 138 aaKnown RBP2.7□□□□□ -1.98
RNF38-210ENST00000611646 CD164L2Q6UWJ8 174 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 RMI2Q96E14 147 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 CENPEQ02224 2701 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 LYRM9A8MSI8 78 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 UBE2AP49459 152 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 FHL2Q14192 279 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 LRRC75A-AS1Q8N1F1 130 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 BPY2O14599 106 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 KPRPQ5T749 579 aaPredicted RBP2.7□□□□□ -1.98
RNF38-210ENST00000611646 LINC00337Q8N6G1 96 aa2.7□□□□□ -1.98
RNF38-210ENST00000611646 H0Y9J4 135 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 FAM229AH3BQW9 127 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 NTM-AS1Q6ZSK4 140 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 WFDC10BQ8IUB3 73 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 BRK1Q8WUW1 75 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 ANKRD17O75179 2603 aaKnown RBP2.69□□□□□ -1.98
RNF38-210ENST00000611646 LINC01546A6NGU7 62 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 HILS1P60008 231 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 PRO0461Q9UI25 63 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 A0A0U1RQV1 116 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 LRCOL1A6NCL2 159 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 IGHV4-30-4P0DP06 118 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 FAM19A1Q7Z5A9 133 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.69□□□□□ -1.98
RNF38-210ENST00000611646 C11orf72Q8NBR9 251 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 LOC107984640A0A0U1RRK4 108 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 HRCT1Q6UXD1 115 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 FAM19A4Q96LR4 140 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 FAM218AQ96MZ4 157 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 CELA1Q9UNI1 258 aa2.69□□□□□ -1.98
RNF38-210ENST00000611646 DOPEY1Q5JWR5 2465 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 AKAP13Q12802 2813 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 TRBV10-3A0A0K0K1G6 114 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 M0R2N4 97 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 EIF4EBP3O60516 100 aaPredicted RBP2.68□□□□□ -1.98
RNF38-210ENST00000611646 SOSTDC1Q6X4U4 206 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 SMIM9A6NGZ8 99 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 ZNF73O43830 326 aaPredicted RBP2.68□□□□□ -1.98
RNF38-210ENST00000611646 IGLV1-51P01701 117 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 Q8N814 137 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 FAM30AQ9NZY2 134 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 A0A087WZ39 114 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 FAM236DA0A1B0GTK5 79 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 FAM236CP0DP71 79 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 TMEM258P61165 79 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 SYCNQ0VAF6 134 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 LINC00846Q9NV44 126 aa2.68□□□□□ -1.98
RNF38-210ENST00000611646 NIPBLQ6KC79 2804 aaeCLIP2.68□□□□□ -1.98
RNF38-210ENST00000611646 ITPR1Q14643 2758 aa2.67□□□□□ -1.98
RNF38-210ENST00000611646 MIFP14174 115 aa2.67□□□□□ -1.98
RNF38-210ENST00000611646 COX7CP15954 63 aa2.67□□□□□ -1.98
RNF38-210ENST00000611646 WFDC13Q8IUB5 93 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms