RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 CCL25O15444 150 aa14.22□□□□□ -0.13
CBWD3-207ENST00000611426 C1orf43Q9BWL3 253 aa14.22□□□□□ -0.13
CBWD3-207ENST00000611426 CRPP02741 224 aa14.21□□□□□ -0.14
CBWD3-207ENST00000611426 NMUP48645 174 aa14.21□□□□□ -0.14
CBWD3-207ENST00000611426 ENHOQ6UWT2 76 aa14.21□□□□□ -0.14
CBWD3-207ENST00000611426 LINC00528Q8N1L1 170 aa14.21□□□□□ -0.14
CBWD3-207ENST00000611426 GEMIN7Q9H840 131 aaKnown RBP14.21□□□□□ -0.14
CBWD3-207ENST00000611426 HNRNPA3P51991 378 aaKnown RBP14.2□□□□□ -0.14
CBWD3-207ENST00000611426 PCP2Q8IVA1 136 aa14.2□□□□□ -0.14
CBWD3-207ENST00000611426 ANGP03950 147 aaKnown RBP14.19□□□□□ -0.14
CBWD3-207ENST00000611426 H3BRM9 83 aa14.18□□□□□ -0.14
CBWD3-207ENST00000611426 C14orf177Q52M58 125 aa14.18□□□□□ -0.14
CBWD3-207ENST00000611426 SCXQ7RTU7 201 aa14.18□□□□□ -0.14
CBWD3-207ENST00000611426 TRAV13-1A0A0B4J241 112 aa14.17□□□□□ -0.14
CBWD3-207ENST00000611426 LEPROTO15243 131 aa14.17□□□□□ -0.14
CBWD3-207ENST00000611426 LINC00469Q8N7U9 141 aa14.17□□□□□ -0.14
CBWD3-207ENST00000611426 PLEKHB2Q96CS7 222 aa14.17□□□□□ -0.14
CBWD3-207ENST00000611426 HIGD1BQ9P298 99 aa14.17□□□□□ -0.14
CBWD3-207ENST00000611426 C2orf91Q6ZV80 131 aa14.16□□□□□ -0.14
CBWD3-207ENST00000611426 CDKN2A-AS1Q9UH64 79 aa14.16□□□□□ -0.14
CBWD3-207ENST00000611426 COX6A2Q02221 97 aa14.15□□□□□ -0.14
CBWD3-207ENST00000611426 IGHV1-58A0A0C4DH39 117 aa14.14□□□□□ -0.15
CBWD3-207ENST00000611426 IGLV5-39A0A0G2JS06 123 aa14.14□□□□□ -0.15
CBWD3-207ENST00000611426 LINC00959A0A1B0GUT2 108 aa14.14□□□□□ -0.15
CBWD3-207ENST00000611426 J3QL48 77 aa14.14□□□□□ -0.15
CBWD3-207ENST00000611426 MIAQ16674 131 aa14.14□□□□□ -0.15
CBWD3-207ENST00000611426 J3QQQ9 107 aa14.13□□□□□ -0.15
CBWD3-207ENST00000611426 PRR34Q9NV39 138 aa14.13□□□□□ -0.15
CBWD3-207ENST00000611426 TP73-AS1Q9UF72 201 aa14.13□□□□□ -0.15
CBWD3-207ENST00000611426 IGHV3OR16-9A0A0B4J2B5 98 aa14.12□□□□□ -0.15
CBWD3-207ENST00000611426 MYMXA0A1B0GTQ4 84 aa14.12□□□□□ -0.15
CBWD3-207ENST00000611426 TSPEAR-AS2P59090 65 aa14.11□□□□□ -0.15
CBWD3-207ENST00000611426 CTAG1AP78358 180 aa14.11□□□□□ -0.15
CBWD3-207ENST00000611426 LINC01561Q8N1V8 128 aa14.11□□□□□ -0.15
CBWD3-207ENST00000611426 CIRBP-AS1Q8TBR5 109 aa14.11□□□□□ -0.15
CBWD3-207ENST00000611426 TTTY13Q9BZ97 58 aa14.11□□□□□ -0.15
CBWD3-207ENST00000611426 USP17L23D6RBM5 183 aa14.1□□□□□ -0.15
CBWD3-207ENST00000611426 SS18Q15532 418 aa14.1□□□□□ -0.15
CBWD3-207ENST00000611426 LINC00269Q8N2A0 174 aa14.1□□□□□ -0.15
CBWD3-207ENST00000611426 SMIM1B2RUZ4 78 aa14.09□□□□□ -0.15
CBWD3-207ENST00000611426 REG3AQ06141 175 aa14.09□□□□□ -0.15
CBWD3-207ENST00000611426 CLPSL2Q6UWE3 100 aa14.09□□□□□ -0.15
CBWD3-207ENST00000611426 A0A087WZ39 114 aa14.09□□□□□ -0.15
CBWD3-207ENST00000611426 LGALS3P17931 250 aaKnown RBP14.09□□□□□ -0.15
CBWD3-207ENST00000611426 ZNF815PA8K554 130 aa14.08□□□□□ -0.16
CBWD3-207ENST00000611426 SPINK8P0C7L1 97 aa14.08□□□□□ -0.16
CBWD3-207ENST00000611426 M0R143 59 aa14.07□□□□□ -0.16
CBWD3-207ENST00000611426 CD164L2Q6UWJ8 174 aa14.06□□□□□ -0.16
CBWD3-207ENST00000611426 KRTAP29-1A8MX34 341 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-207ENST00000611426 HSD52Q0P140 79 aa14.05□□□□□ -0.16
CBWD3-207ENST00000611426 LBHQ53QV2 105 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-207ENST00000611426 SNHG12Q9BXW3 62 aa14.05□□□□□ -0.16
CBWD3-207ENST00000611426 IGKV3OR2-268A0A0C4DH90 116 aa14.04□□□□□ -0.16
CBWD3-207ENST00000611426 TAL2Q16559 108 aa14.04□□□□□ -0.16
CBWD3-207ENST00000611426 KRTAP26-1Q6PEX3 210 aa14.04□□□□□ -0.16
CBWD3-207ENST00000611426 TRAV8-4A0A0B4J246 113 aa14.03□□□□□ -0.16
CBWD3-207ENST00000611426 IGLV10-54A0A075B6I4 117 aa14.02□□□□□ -0.17
CBWD3-207ENST00000611426 IGHV3-64A0A075B6Q5 118 aa14.02□□□□□ -0.17
CBWD3-207ENST00000611426 CHCHD10Q8WYQ3 142 aaPredicted RBP14.02□□□□□ -0.17
CBWD3-207ENST00000611426 NDUFA1O15239 70 aa14.01□□□□□ -0.17
CBWD3-207ENST00000611426 KRTAP10-4P60372 401 aaPredicted RBP14.01□□□□□ -0.17
CBWD3-207ENST00000611426 C9orf163Q8N9P6 203 aa14.01□□□□□ -0.17
CBWD3-207ENST00000611426 NDUFA12Q9UI09 145 aa14.01□□□□□ -0.17
CBWD3-207ENST00000611426 XCL1P47992 114 aa13.99□□□□□ -0.17
CBWD3-207ENST00000611426 BVES-AS1Q5T3Y7 98 aa13.99□□□□□ -0.17
CBWD3-207ENST00000611426 SPANXB1Q9NS25 103 aaPredicted RBP13.99□□□□□ -0.17
CBWD3-207ENST00000611426 LRP1Q07954 4544 aaKnown RBP13.99□□□□□ -0.17
CBWD3-207ENST00000611426 FOXI1Q12951 378 aa13.98□□□□□ -0.17
CBWD3-207ENST00000611426 SCGB1D4Q6XE38 83 aa13.98□□□□□ -0.17
CBWD3-207ENST00000611426 ZNF625Q96I27 306 aaPredicted RBP13.97□□□□□ -0.17
CBWD3-207ENST00000611426 A0A0J9YXY3 114 aa13.96□□□□□ -0.17
CBWD3-207ENST00000611426 COX7A2LO14548 114 aa13.96□□□□□ -0.17
CBWD3-207ENST00000611426 TIMM17BO60830 172 aa13.96□□□□□ -0.17
CBWD3-207ENST00000611426 SFTA2Q6UW10 78 aa13.96□□□□□ -0.17
CBWD3-207ENST00000611426 HINT1P49773 126 aaPredicted RBP13.96□□□□□ -0.18
CBWD3-207ENST00000611426 C5orf38Q86SI9 138 aa13.96□□□□□ -0.18
CBWD3-207ENST00000611426 COX7B2Q8TF08 81 aa13.96□□□□□ -0.18
CBWD3-207ENST00000611426 FAT3Q8TDW7 4589 aa13.95□□□□□ -0.18
CBWD3-207ENST00000611426 RPL37AP61513 92 aaKnown RBP13.95□□□□□ -0.18
CBWD3-207ENST00000611426 HERV-K104P63124 156 aa13.95□□□□□ -0.18
CBWD3-207ENST00000611426 SDIM1Q6ZPB5 146 aa13.95□□□□□ -0.18
CBWD3-207ENST00000611426 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-207ENST00000611426 Q8IZM0 81 aa13.94□□□□□ -0.18
CBWD3-207ENST00000611426 PKHD1L1Q86WI1 4243 aa13.93□□□□□ -0.18
CBWD3-207ENST00000611426 CNBPP62633 177 aaKnown RBP13.93□□□□□ -0.18
CBWD3-207ENST00000611426 ORAOV1Q8WV07 137 aa13.93□□□□□ -0.18
CBWD3-207ENST00000611426 LITAFQ99732 161 aa13.93□□□□□ -0.18
CBWD3-207ENST00000611426 TMEM238C9JI98 176 aa13.92□□□□□ -0.18
CBWD3-207ENST00000611426 OXTP01178 125 aa13.92□□□□□ -0.18
CBWD3-207ENST00000611426 CEND1Q8N111 149 aa13.92□□□□□ -0.18
CBWD3-207ENST00000611426 GAGE12HA6NDE8 117 aa13.91□□□□□ -0.18
CBWD3-207ENST00000611426 PANO1I0J062 215 aa13.91□□□□□ -0.18
CBWD3-207ENST00000611426 COL5A1-AS1Q5SY13 56 aa13.91□□□□□ -0.18
CBWD3-207ENST00000611426 Q6ZVH6 145 aa13.91□□□□□ -0.18
CBWD3-207ENST00000611426 HIST1H4GQ99525 98 aa13.91□□□□□ -0.18
CBWD3-207ENST00000611426 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-207ENST00000611426 APOMO95445 188 aa13.89□□□□□ -0.19
CBWD3-207ENST00000611426 KIAA0087Q14695 138 aa13.89□□□□□ -0.19
CBWD3-207ENST00000611426 SPANXDQ9BXN6 97 aa13.89□□□□□ -0.19
CBWD3-207ENST00000611426 SPANXCQ9NY87 97 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms