RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 SMG6Q86US8 1419 aaKnown RBP-1.88□□□□□ -2.71
CTSS-206ENST00000607427 SSSCA1O60232 199 aa-1.88□□□□□ -2.71
CTSS-206ENST00000607427 CATR1Q13166 79 aa-1.88□□□□□ -2.71
CTSS-206ENST00000607427 C5orf38Q86SI9 138 aa-1.88□□□□□ -2.71
CTSS-206ENST00000607427 A0A0G2JMZ2 1700 aa-1.88□□□□□ -2.71
CTSS-206ENST00000607427 SEC11AP67812 179 aa-1.89□□□□□ -2.71
CTSS-206ENST00000607427 Q56UQ5 140 aa-1.89□□□□□ -2.71
CTSS-206ENST00000607427 XRN1Q8IZH2 1706 aaKnown RBP-1.89□□□□□ -2.71
CTSS-206ENST00000607427 NKTRP30414 1462 aaKnown RBP-1.89□□□□□ -2.71
CTSS-206ENST00000607427 CUBNO60494 3623 aa-1.9□□□□□ -2.71
CTSS-206ENST00000607427 MARF1Q9Y4F3 1742 aaKnown RBP-1.9□□□□□ -2.71
CTSS-206ENST00000607427 SCN7AQ01118 1682 aa-1.9□□□□□ -2.71
CTSS-206ENST00000607427 ROBO1Q9Y6N7 1651 aa-1.9□□□□□ -2.71
CTSS-206ENST00000607427 HYDINQ4G0P3 5121 aa-1.91□□□□□ -2.71
CTSS-206ENST00000607427 FAM25AB3EWG3 89 aa-1.91□□□□□ -2.72
CTSS-206ENST00000607427 FAM25CB3EWG5 89 aa-1.91□□□□□ -2.72
CTSS-206ENST00000607427 FAM25GB3EWG6 89 aa-1.91□□□□□ -2.72
CTSS-206ENST00000607427 MT1AP04731 61 aa-1.91□□□□□ -2.72
CTSS-206ENST00000607427 C8orf59Q8N0T1 100 aaPredicted RBP-1.91□□□□□ -2.72
CTSS-206ENST00000607427 NLRP1Q9C000 1473 aa-1.91□□□□□ -2.72
CTSS-206ENST00000607427 PHLPP1O60346 1717 aa-1.91□□□□□ -2.72
CTSS-206ENST00000607427 EHBP1L1Q8N3D4 1523 aa-1.91□□□□□ -2.72
CTSS-206ENST00000607427 ADAMTS12P58397 1594 aa-1.92□□□□□ -2.72
CTSS-206ENST00000607427 SFTA2Q6UW10 78 aa-1.92□□□□□ -2.72
CTSS-206ENST00000607427 ADGRL2O95490 1459 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 PLEKHH2Q8IVE3 1493 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 FOCADQ5VW36 1801 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 A0A1B0GWA3 101 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 I3L3M4 83 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 GNG7O60262 68 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 APOC2P02655 101 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 PTPN23Q9H3S7 1636 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 SLIT1O75093 1534 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 KALRNO60229 2985 aa-1.93□□□□□ -2.72
CTSS-206ENST00000607427 FAM223BA6NKX1 122 aa-1.94□□□□□ -2.72
CTSS-206ENST00000607427 H0YGG7 62 aa-1.94□□□□□ -2.72
CTSS-206ENST00000607427 UBE2D3P61077 147 aa-1.94□□□□□ -2.72
CTSS-206ENST00000607427 UBE2D2P62837 147 aa-1.94□□□□□ -2.72
CTSS-206ENST00000607427 ARL11Q969Q4 196 aa-1.94□□□□□ -2.72
CTSS-206ENST00000607427 COL4A6Q14031 1691 aa-1.94□□□□□ -2.72
CTSS-206ENST00000607427 CCDC141Q6ZP82 1450 aa-1.94□□□□□ -2.72
CTSS-206ENST00000607427 A0A1B0GU69 56 aa-1.95□□□□□ -2.72
CTSS-206ENST00000607427 LINC00470Q9BZP3 86 aa-1.95□□□□□ -2.72
CTSS-206ENST00000607427 BIRC6Q9NR09 4857 aa-1.95□□□□□ -2.72
CTSS-206ENST00000607427 OOSP1A8MZH6 123 aa-1.96□□□□□ -2.72
CTSS-206ENST00000607427 BTG2P78543 158 aa-1.96□□□□□ -2.72
CTSS-206ENST00000607427 LELP1Q5T871 98 aa-1.96□□□□□ -2.72
CTSS-206ENST00000607427 C9orf153Q5TBE3 101 aa-1.96□□□□□ -2.72
CTSS-206ENST00000607427 MANBALQ9NQG1 85 aa-1.96□□□□□ -2.72
CTSS-206ENST00000607427 NUP188Q5SRE5 1749 aa-1.97□□□□□ -2.72
CTSS-206ENST00000607427 TROQ12816 1431 aaPredicted RBP-1.97□□□□□ -2.72
CTSS-206ENST00000607427 GNG11P61952 73 aa-1.97□□□□□ -2.72
CTSS-206ENST00000607427 SELENOWP63302 87 aa-1.97□□□□□ -2.72
CTSS-206ENST00000607427 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.97□□□□□ -2.72
CTSS-206ENST00000607427 MBD5Q9P267 1494 aa-1.97□□□□□ -2.72
CTSS-206ENST00000607427 ANKRD11Q6UB99 2663 aaPredicted RBP-1.97□□□□□ -2.73
CTSS-206ENST00000607427 LAMA2P24043 3122 aaKnown RBP-1.97□□□□□ -2.73
CTSS-206ENST00000607427 RYR1P21817 5038 aa-1.98□□□□□ -2.73
CTSS-206ENST00000607427 Q0VG73 95 aa-1.98□□□□□ -2.73
CTSS-206ENST00000607427 PAIP2BQ9ULR5 123 aaKnown RBP-1.98□□□□□ -2.73
CTSS-206ENST00000607427 PDCD11Q14690 1871 aaKnown RBP-1.99□□□□□ -2.73
CTSS-206ENST00000607427 QRICH2Q9H0J4 1663 aa-1.99□□□□□ -2.73
CTSS-206ENST00000607427 TRAPPC2P0DI81 140 aa-1.99□□□□□ -2.73
CTSS-206ENST00000607427 TRAPPC2BP0DI82 140 aa-1.99□□□□□ -2.73
CTSS-206ENST00000607427 HEPN1Q6WQI6 88 aa-1.99□□□□□ -2.73
CTSS-206ENST00000607427 VPS13BQ7Z7G8 4022 aa-1.99□□□□□ -2.73
CTSS-206ENST00000607427 PDE4DIPQ5VU43 2346 aa-2□□□□□ -2.73
CTSS-206ENST00000607427 UBE2L5PA0A1B0GUS4 154 aa-2□□□□□ -2.73
CTSS-206ENST00000607427 LOC105371267A0A1B0GV96 52 aa-2□□□□□ -2.73
CTSS-206ENST00000607427 UBE2L3P68036 154 aaKnown RBP-2□□□□□ -2.73
CTSS-206ENST00000607427 MRPL34Q9BQ48 92 aaKnown RBP-2□□□□□ -2.73
CTSS-206ENST00000607427 LINC00846Q9NV44 126 aa-2□□□□□ -2.73
CTSS-206ENST00000607427 ACACAQ13085 2346 aa-2□□□□□ -2.73
CTSS-206ENST00000607427 A0A087WVE0 104 aa-2.01□□□□□ -2.73
CTSS-206ENST00000607427 C6orf201Q7Z4U5 140 aa-2.01□□□□□ -2.73
CTSS-206ENST00000607427 KIAA1109Q2LD37 5005 aa-2.01□□□□□ -2.73
CTSS-206ENST00000607427 H3BNG1 76 aa-2.02□□□□□ -2.73
CTSS-206ENST00000607427 COX6CP09669 75 aa-2.02□□□□□ -2.73
CTSS-206ENST00000607427 SAA2P0DJI9 122 aaPredicted RBP-2.02□□□□□ -2.73
CTSS-206ENST00000607427 SNCAP37840 140 aa-2.02□□□□□ -2.73
CTSS-206ENST00000607427 WFDC13Q8IUB5 93 aa-2.02□□□□□ -2.73
CTSS-206ENST00000607427 DPH3P1Q9H4G8 78 aa-2.02□□□□□ -2.73
CTSS-206ENST00000607427 COL14A1Q05707 1796 aaKnown RBP-2.03□□□□□ -2.73
CTSS-206ENST00000607427 ANKRD36A6QL64 1941 aa-2.03□□□□□ -2.73
CTSS-206ENST00000607427 TRAV30A0A087WSZ9 112 aa-2.03□□□□□ -2.73
CTSS-206ENST00000607427 F6UZH7 168 aa-2.03□□□□□ -2.73
CTSS-206ENST00000607427 C12orf57Q99622 126 aa-2.03□□□□□ -2.73
CTSS-206ENST00000607427 PRO1854Q9UHT4 67 aa-2.03□□□□□ -2.73
CTSS-206ENST00000607427 DIP2CQ9Y2E4 1556 aa-2.03□□□□□ -2.73
CTSS-206ENST00000607427 TOP2BQ02880 1626 aa-2.03□□□□□ -2.73
CTSS-206ENST00000607427 FGF7P21781 194 aa-2.04□□□□□ -2.74
CTSS-206ENST00000607427 NAIPQ13075 1403 aa-2.04□□□□□ -2.74
CTSS-206ENST00000607427 EDC4Q6P2E9 1401 aaKnown RBP-2.04□□□□□ -2.74
CTSS-206ENST00000607427 SCAPERQ9BY12 1400 aa-2.05□□□□□ -2.74
CTSS-206ENST00000607427 KTN1Q86UP2 1357 aaKnown RBP-2.05□□□□□ -2.74
CTSS-206ENST00000607427 CDKN2A-AS1Q9UH64 79 aa-2.05□□□□□ -2.74
CTSS-206ENST00000607427 DNAH2Q9P225 4427 aa-2.06□□□□□ -2.74
CTSS-206ENST00000607427 MRC2Q9UBG0 1479 aa-2.06□□□□□ -2.74
CTSS-206ENST00000607427 NCOA3Q9Y6Q9 1424 aa-2.06□□□□□ -2.74
CTSS-206ENST00000607427 CCL22O00626 93 aa-2.06□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms