RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 COX7B2Q8TF08 81 aa4.99□□□□□ -1.61
MSH6-211ENST00000606499 CAMK2N2Q96S95 79 aa4.99□□□□□ -1.61
MSH6-211ENST00000606499 DYNC1H1Q14204 4646 aaKnown RBP4.98□□□□□ -1.61
MSH6-211ENST00000606499 SCGB1D1O95968 90 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 TSPEAR-AS2P59090 65 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 SYCNQ0VAF6 134 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 C6orf226Q5I0X4 101 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 C10orf25Q5T742 122 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 UNQ6190/PRO20217Q6UXQ8 127 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 Q6ZRU5 148 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 STPG4Q8N801 248 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 C2orf48Q96LS8 159 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 CARD19Q96LW7 228 aa4.98□□□□□ -1.61
MSH6-211ENST00000606499 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.97□□□□□ -1.61
MSH6-211ENST00000606499 NDUFA1O15239 70 aa4.97□□□□□ -1.61
MSH6-211ENST00000606499 CKS1BP61024 79 aa4.97□□□□□ -1.61
MSH6-211ENST00000606499 HERVK_113P61574 105 aa4.97□□□□□ -1.61
MSH6-211ENST00000606499 MAJINQ3KP22 176 aa4.97□□□□□ -1.61
MSH6-211ENST00000606499 IGKV2D-26A0A0A0MRZ7 120 aa4.96□□□□□ -1.62
MSH6-211ENST00000606499 E9PLD3 99 aa4.96□□□□□ -1.62
MSH6-211ENST00000606499 LEPROTO15243 131 aa4.96□□□□□ -1.62
MSH6-211ENST00000606499 ANKRD39Q53RE8 183 aa4.96□□□□□ -1.62
MSH6-211ENST00000606499 C9orf116Q5BN46 136 aaPredicted RBP4.96□□□□□ -1.62
MSH6-211ENST00000606499 CDPF1Q6NVV7 123 aa4.96□□□□□ -1.62
MSH6-211ENST00000606499 C9orf163Q8N9P6 203 aa4.96□□□□□ -1.62
MSH6-211ENST00000606499 C6orf48Q9UBA6 75 aa4.96□□□□□ -1.62
MSH6-211ENST00000606499 C16orf90A8MZG2 172 aa4.95□□□□□ -1.62
MSH6-211ENST00000606499 J3QQQ9 107 aa4.95□□□□□ -1.62
MSH6-211ENST00000606499 GCSHP23434 173 aa4.95□□□□□ -1.62
MSH6-211ENST00000606499 CXCL5P42830 114 aa4.95□□□□□ -1.62
MSH6-211ENST00000606499 AKR1D1P51857 326 aa4.95□□□□□ -1.62
MSH6-211ENST00000606499 JOSD1Q15040 202 aaPredicted RBP4.95□□□□□ -1.62
MSH6-211ENST00000606499 PLEKHB2Q96CS7 222 aa4.95□□□□□ -1.62
MSH6-211ENST00000606499 ZNF625Q96I27 306 aaPredicted RBP4.95□□□□□ -1.62
MSH6-211ENST00000606499 LRP1BQ9NZR2 4599 aa4.94□□□□□ -1.62
MSH6-211ENST00000606499 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
MSH6-211ENST00000606499 F8WDY8 70 aa4.94□□□□□ -1.62
MSH6-211ENST00000606499 LGALS3P17931 250 aaKnown RBP4.94□□□□□ -1.62
MSH6-211ENST00000606499 KRTAP10-1P60331 282 aa4.94□□□□□ -1.62
MSH6-211ENST00000606499 PYY3Q5JQD4 70 aa4.94□□□□□ -1.62
MSH6-211ENST00000606499 TTTY13Q9BZ97 58 aa4.94□□□□□ -1.62
MSH6-211ENST00000606499 NDUFA12Q9UI09 145 aa4.94□□□□□ -1.62
MSH6-211ENST00000606499 A0A096LNI7 61 aa4.93□□□□□ -1.62
MSH6-211ENST00000606499 TRBV30A0A0K0K1B3 111 aa4.93□□□□□ -1.62
MSH6-211ENST00000606499 PANO1I0J062 215 aa4.93□□□□□ -1.62
MSH6-211ENST00000606499 APOBP04114 4563 aaKnown RBP4.93□□□□□ -1.62
MSH6-211ENST00000606499 CHTF8P0CG12 524 aa4.93□□□□□ -1.62
MSH6-211ENST00000606499 NMUP48645 174 aa4.93□□□□□ -1.62
MSH6-211ENST00000606499 RPL18AQ02543 176 aaKnown RBP4.93□□□□□ -1.62
MSH6-211ENST00000606499 RNF151Q2KHN1 245 aa4.93□□□□□ -1.62
MSH6-211ENST00000606499 SDIM1Q6ZPB5 146 aa4.93□□□□□ -1.62
MSH6-211ENST00000606499 IGKV2-24A0A0C4DH68 120 aa4.92□□□□□ -1.62
MSH6-211ENST00000606499 LOC107984640A0A0U1RRK4 108 aa4.92□□□□□ -1.62
MSH6-211ENST00000606499 LOC105371267A0A1B0GV96 52 aa4.92□□□□□ -1.62
MSH6-211ENST00000606499 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
MSH6-211ENST00000606499 Q6ZRP5 223 aa4.92□□□□□ -1.62
MSH6-211ENST00000606499 ERG28Q9UKR5 140 aa4.92□□□□□ -1.62
MSH6-211ENST00000606499 A0A0U1RRA0 63 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 MYMXA0A1B0GTQ4 84 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 ZNF815PA8K554 130 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 HSBP1L1C9JCN9 74 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 NDUFC2-KCTD14E9PQ53 114 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 PFN2P35080 140 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 HAMPP81172 84 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 GAGE2BQ13066 116 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 SFTA2Q6UW10 78 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 PCP2Q8IVA1 136 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 VAMP8Q9BV40 100 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 FAM30AQ9NZY2 134 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 TP73-AS1Q9UF72 201 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 PAM16Q9Y3D7 125 aa4.91□□□□□ -1.62
MSH6-211ENST00000606499 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
MSH6-211ENST00000606499 TLX1NBP0CAT3 122 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 SMIM13P0DJ93 91 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 PTTG1IPP53801 180 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 HERV-K104P63124 156 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 GAGE2EQ4V326 116 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 SPATA45Q537H7 98 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 MEIG1Q5JSS6 88 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 Q6ZSA8 131 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 SPACA4Q8TDM5 124 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 GAGE2DQ9UEU5 116 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.63
MSH6-211ENST00000606499 A0A0J9YXY3 114 aa4.89□□□□□ -1.63
MSH6-211ENST00000606499 LINC00158P58513 81 aa4.89□□□□□ -1.63
MSH6-211ENST00000606499 XAGE1AQ9HD64 81 aa4.89□□□□□ -1.63
MSH6-211ENST00000606499 PKIGQ9Y2B9 76 aa4.89□□□□□ -1.63
MSH6-211ENST00000606499 CIRBPQ14011 172 aaKnown RBP4.88□□□□□ -1.63
MSH6-211ENST00000606499 COX17Q14061 63 aa4.88□□□□□ -1.63
MSH6-211ENST00000606499 C9orf129Q5T035 196 aaKnown RBP4.88□□□□□ -1.63
MSH6-211ENST00000606499 SCXQ7RTU7 201 aa4.88□□□□□ -1.63
MSH6-211ENST00000606499 DAND5Q8N907 189 aa4.88□□□□□ -1.63
MSH6-211ENST00000606499 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
MSH6-211ENST00000606499 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
MSH6-211ENST00000606499 FAM168BA1KXE4 195 aa4.87□□□□□ -1.63
MSH6-211ENST00000606499 SMIM6P0DI80 62 aa4.87□□□□□ -1.63
MSH6-211ENST00000606499 COX8AP10176 69 aa4.87□□□□□ -1.63
MSH6-211ENST00000606499 ADAMTSL4-AS1Q5T5F5 129 aa4.87□□□□□ -1.63
MSH6-211ENST00000606499 SCGB1D4Q6XE38 83 aa4.87□□□□□ -1.63
MSH6-211ENST00000606499 MIR7-3HGQ8N6C7 128 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms