RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 CIRBP-AS1Q8TBR5 109 aa3.84□□□□□ -1.79
COL4A3BP-207ENST00000604926 TNCP24821 2201 aa3.84□□□□□ -1.8
COL4A3BP-207ENST00000604926 C17orf98A8MV24 154 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 ZNF625Q96I27 306 aaPredicted RBP3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 USF3Q68DE3 2245 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 COL12A1Q99715 3063 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGHV3-64A0A075B6Q5 118 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGLV1-44P01699 117 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGHV1-46P01743 117 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 PRR4Q16378 134 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 ORMDL1Q9P0S3 153 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 DOPEY2Q9Y3R5 2298 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGHV1-3A0A0C4DH29 117 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 PPP1R17O96001 155 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 CD52P31358 61 aa3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 ASH1LQ9NR48 2969 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-207ENST00000604926 C20orf166-AS1Q96NR2 134 aa3.82□□□□□ -1.8
COL4A3BP-207ENST00000604926 TTTY12Q9BZ98 90 aa3.82□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGLV2-18A0A075B6J9 118 aa3.82□□□□□ -1.8
COL4A3BP-207ENST00000604926 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
COL4A3BP-207ENST00000604926 NCR3O14931 201 aa3.82□□□□□ -1.8
COL4A3BP-207ENST00000604926 NPBQ8NG41 125 aa3.82□□□□□ -1.8
COL4A3BP-207ENST00000604926 SPG11Q96JI7 2443 aa3.82□□□□□ -1.8
COL4A3BP-207ENST00000604926 SPINK7P58062 85 aa3.82□□□□□ -1.8
COL4A3BP-207ENST00000604926 LINC01006Q8NI28 216 aa3.82□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGHV3-15A0A0B4J1V0 119 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 DEFB113Q30KQ7 82 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 C10orf113Q5VZT2 155 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGLV5-37A0A075B6J1 123 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGHV7-4-1A0A0J9YVY3 117 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 LINC01565O15544 149 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 PATE4P0C8F1 98 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 SPAG11BQ08648 103 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 SPAG11AQ6PDA7 123 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 USP24Q9UPU5 2620 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 BSNQ9UPA5 3926 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGF2RP11717 2491 aa3.81□□□□□ -1.8
COL4A3BP-207ENST00000604926 MALRD1Q5VYJ5 2156 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGHV4-4A0A075B6R2 117 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGKV3D-11A0A0A0MRZ8 115 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 GAS8-AS1O95177 125 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 C7orf33Q8WU49 177 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 A0A0J9YX75 114 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 HAMPP81172 84 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 DEFB104AQ8WTQ1 72 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGKV1-17P01599 117 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 KALRNO60229 2985 aa3.8□□□□□ -1.8
COL4A3BP-207ENST00000604926 F5P12259 2224 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGHV3-64DA0A0J9YX35 117 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 DEFB108AA8MXU0 73 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 CASC10Q5T4H9 136 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 C9orf47Q6ZRZ4 202 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 LINC00467Q9BRT7 94 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 FAM215AQ9Y5M1 114 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 LITAFQ99732 161 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 ZZEF1O43149 2961 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 SMG1Q96Q15 3661 aaKnown RBP3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 IGLV4-69A0A075B6H9 119 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 TRBV10-1A0A0K0K1A3 114 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 MSMBP08118 114 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 LINC00483Q53H64 154 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 DPM3Q9P2X0 92 aa3.79□□□□□ -1.8
COL4A3BP-207ENST00000604926 NBPF19A0A087WUL8 3843 aa3.78□□□□□ -1.8
COL4A3BP-207ENST00000604926 DNAH10OSP0CZ25 163 aa3.78□□□□□ -1.8
COL4A3BP-207ENST00000604926 MIR7-3HGQ8N6C7 128 aa3.78□□□□□ -1.8
COL4A3BP-207ENST00000604926 MINOS1-NBL1R4GNA1 71 aa3.78□□□□□ -1.8
COL4A3BP-207ENST00000604926 PTPRQQ9UMZ3 2332 aa3.78□□□□□ -1.8
COL4A3BP-207ENST00000604926 NOTCH1P46531 2555 aa3.78□□□□□ -1.8
COL4A3BP-207ENST00000604926 CR1P17927 2039 aa3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 IGLV8-61A0A075B6I0 122 aa3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 IGLV4-3A0A075B6K6 122 aa3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 TLX1NBP0CAT3 122 aa3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 ELOF1P60002 83 aaKnown RBP3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 LINC00208Q96KT6 92 aa3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 BOD1L1Q8NFC6 3051 aa3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 A8MUU9 505 aa3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 MRPL36Q9P0J6 103 aaKnown RBP3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 SMIM29Q86T20 159 aa3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 OTOGLQ3ZCN5 2332 aa3.77□□□□□ -1.81
COL4A3BP-207ENST00000604926 IGKV1D-37A0A075B6S9 117 aa3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 IGHV4-30-2A0A087WSY4 118 aa3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 SPTBN1Q01082 2364 aaKnown RBP3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 DMXL2Q8TDJ6 3036 aa3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 IGKV1OR2-108A0A075B7D4 117 aa3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 Q6ZTI0 123 aa3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 Q9BRP9 147 aa3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 SETD2Q9BYW2 2564 aaPredicted RBP3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 A6NDX4 124 aa3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 Q8N9W7 124 aa3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 MUC7Q8TAX7 377 aa3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 ZCCHC13Q8WW36 166 aaKnown RBP3.76□□□□□ -1.81
COL4A3BP-207ENST00000604926 MTORP42345 2549 aa3.75□□□□□ -1.81
COL4A3BP-207ENST00000604926 JMJD1CQ15652 2540 aa3.75□□□□□ -1.81
COL4A3BP-207ENST00000604926 CACNA1EQ15878 2313 aa3.75□□□□□ -1.81
COL4A3BP-207ENST00000604926 RP1L1Q8IWN7 2480 aaPredicted RBP3.75□□□□□ -1.81
COL4A3BP-207ENST00000604926 IGHV4OR15-8A0A075B7B6 117 aa3.75□□□□□ -1.81
COL4A3BP-207ENST00000604926 A0A087WW49 117 aa3.75□□□□□ -1.81
COL4A3BP-207ENST00000604926 A0A1B0GVX0 72 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms