RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 USMG5Q96IX5 58 aa-1.14□□□□□ -2.59
TUBE1-205ENST00000603651 NAA60Q9H7X0 242 aa-1.14□□□□□ -2.59
TUBE1-205ENST00000603651 COPZ2Q9P299 210 aa-1.14□□□□□ -2.59
TUBE1-205ENST00000603651 SERP1Q9Y6X1 66 aa-1.14□□□□□ -2.59
TUBE1-205ENST00000603651 GCN1Q92616 2671 aaKnown RBP-1.14□□□□□ -2.59
TUBE1-205ENST00000603651 UTP20O75691 2785 aaKnown RBP-1.14□□□□□ -2.59
TUBE1-205ENST00000603651 LOC285095A0A1B0GVY8 99 aa-1.15□□□□□ -2.59
TUBE1-205ENST00000603651 H1FX-AS1Q4G0G2 97 aa-1.15□□□□□ -2.59
TUBE1-205ENST00000603651 LINC01600Q96MT4 127 aa-1.15□□□□□ -2.59
TUBE1-205ENST00000603651 SPANXDQ9BXN6 97 aa-1.15□□□□□ -2.59
TUBE1-205ENST00000603651 RERGLQ9H628 205 aa-1.15□□□□□ -2.59
TUBE1-205ENST00000603651 NXT2Q9NPJ8 142 aaKnown RBP-1.15□□□□□ -2.59
TUBE1-205ENST00000603651 MYH7P12883 1935 aa-1.15□□□□□ -2.59
TUBE1-205ENST00000603651 CPSF1Q10570 1443 aaKnown RBP-1.15□□□□□ -2.59
TUBE1-205ENST00000603651 TROQ12816 1431 aaPredicted RBP-1.15□□□□□ -2.59
TUBE1-205ENST00000603651 COL4A6Q14031 1691 aa-1.16□□□□□ -2.59
TUBE1-205ENST00000603651 H0YGG7 62 aa-1.16□□□□□ -2.6
TUBE1-205ENST00000603651 IFNGP01579 166 aa-1.16□□□□□ -2.6
TUBE1-205ENST00000603651 MYOZ3Q8TDC0 251 aa-1.16□□□□□ -2.6
TUBE1-205ENST00000603651 LCN9Q8WX39 176 aa-1.16□□□□□ -2.6
TUBE1-205ENST00000603651 LZICQ8WZA0 190 aa-1.16□□□□□ -2.6
TUBE1-205ENST00000603651 LINC00474Q9P2X8 69 aa-1.16□□□□□ -2.6
TUBE1-205ENST00000603651 RELNP78509 3460 aa-1.16□□□□□ -2.6
TUBE1-205ENST00000603651 NBEAQ8NFP9 2946 aa-1.16□□□□□ -2.6
TUBE1-205ENST00000603651 PHLPP1O60346 1717 aa-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 MARF1Q9Y4F3 1742 aaKnown RBP-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 H0YAA0 97 aa-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 UBA52P62987 128 aaKnown RBP-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 AKAP14Q86UN6 197 aa-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 C9orf62Q8N4C0 152 aa-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 CDC42SE2Q9NRR3 84 aa-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 COL6A5A8TX70 2615 aa-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 SMG6Q86US8 1419 aaKnown RBP-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 ROBO1Q9Y6N7 1651 aa-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 FOCADQ5VW36 1801 aa-1.17□□□□□ -2.6
TUBE1-205ENST00000603651 A0A0G2JMZ2 1700 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 C1orf167Q5SNV9 1468 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 SLIT1O75093 1534 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 SCN7AQ01118 1682 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 CHKB-CPT1BH3BT56 60 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 ARPC4P59998 168 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 DR1Q01658 176 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 FAM223AQ8IWN6 122 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 FDCSPQ8NFU4 85 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 COPS9Q8WXC6 57 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 SNRNP25Q9BV90 132 aaKnown RBP-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 CRIPTQ9P021 101 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 FAM186AA6NE01 2351 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 TRRAPQ9Y4A5 3859 aa-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 XRN1Q8IZH2 1706 aaKnown RBP-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 NKTRP30414 1462 aaKnown RBP-1.18□□□□□ -2.6
TUBE1-205ENST00000603651 CEP295Q9C0D2 2601 aa-1.19□□□□□ -2.6
TUBE1-205ENST00000603651 TCHHQ07283 1943 aa-1.19□□□□□ -2.6
TUBE1-205ENST00000603651 ADAMTS12P58397 1594 aa-1.19□□□□□ -2.6
TUBE1-205ENST00000603651 FAM167A-AS1Q96KT0 104 aa-1.19□□□□□ -2.6
TUBE1-205ENST00000603651 PPP3R2Q96LZ3 170 aa-1.19□□□□□ -2.6
TUBE1-205ENST00000603651 FAIMQ9NVQ4 179 aa-1.19□□□□□ -2.6
TUBE1-205ENST00000603651 ARL2-SNX15V9GYD0 113 aa-1.19□□□□□ -2.6
TUBE1-205ENST00000603651 PTPN23Q9H3S7 1636 aa-1.19□□□□□ -2.6
TUBE1-205ENST00000603651 TRANK1O15050 2925 aa-1.19□□□□□ -2.6
TUBE1-205ENST00000603651 REV3LO60673 3130 aa-1.2□□□□□ -2.6
TUBE1-205ENST00000603651 NBEAL2Q6ZNJ1 2754 aa-1.2□□□□□ -2.6
TUBE1-205ENST00000603651 LOC100130705A0A1B0GUX0 176 aa-1.2□□□□□ -2.6
TUBE1-205ENST00000603651 WHAMMP3Q1A5X7 153 aa-1.2□□□□□ -2.6
TUBE1-205ENST00000603651 MEIG1Q5JSS6 88 aa-1.2□□□□□ -2.6
TUBE1-205ENST00000603651 COMMD6Q7Z4G1 85 aa-1.2□□□□□ -2.6
TUBE1-205ENST00000603651 EHBP1L1Q8N3D4 1523 aa-1.2□□□□□ -2.6
TUBE1-205ENST00000603651 NUP188Q5SRE5 1749 aa-1.2□□□□□ -2.6
TUBE1-205ENST00000603651 CHD7Q9P2D1 2997 aa-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 MIF4GDA9UHW6 222 aaKnown RBP-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 SSSCA1O60232 199 aa-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 DEFB1P60022 68 aa-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 MT1XP80297 61 aa-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 Q56UQ5 140 aa-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 C5orf38Q86SI9 138 aa-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 ADGRL2O95490 1459 aa-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 DNAH5Q8TE73 4624 aa-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 QRICH2Q9H0J4 1663 aa-1.21□□□□□ -2.6
TUBE1-205ENST00000603651 ANKRD50Q9ULJ7 1429 aa-1.22□□□□□ -2.6
TUBE1-205ENST00000603651 PLEKHH2Q8IVE3 1493 aa-1.22□□□□□ -2.6
TUBE1-205ENST00000603651 CATR1Q13166 79 aa-1.22□□□□□ -2.6
TUBE1-205ENST00000603651 PRO1933Q9H354 126 aa-1.22□□□□□ -2.6
TUBE1-205ENST00000603651 C5orf42Q9H799 3197 aa-1.22□□□□□ -2.6
TUBE1-205ENST00000603651 TRIOO75962 3097 aa-1.22□□□□□ -2.61
TUBE1-205ENST00000603651 SRCAPQ6ZRS2 3230 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 ACACBO00763 2458 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 KNDC1Q76NI1 1749 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 NLRP1Q9C000 1473 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 MBD5Q9P267 1494 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 K7EP34 96 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 MT1HL1P0DM35 61 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 BTG2P78543 158 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 LELP1Q5T871 98 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 C8orf59Q8N0T1 100 aaPredicted RBP-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 PFDN5Q99471 154 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 UQCR10Q9UDW1 63 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 CFAP46Q8IYW2 2715 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 SMG1Q96Q15 3661 aaKnown RBP-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 DNAH17Q9UFH2 4485 aa-1.23□□□□□ -2.61
TUBE1-205ENST00000603651 COL14A1Q05707 1796 aaKnown RBP-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms