RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190		F8W036	122 aa		10.47	□□□□□ -0.73
IRF3-231	ENST00000602190	C6orf226	Q5I0X4	101 aa		10.47	□□□□□ -0.73
IRF3-231	ENST00000602190	ZC2HC1B	Q5TFG8	222 aa		10.47	□□□□□ -0.73
IRF3-231	ENST00000602190	S100A8	P05109	93 aa		10.46	□□□□□ -0.73
IRF3-231	ENST00000602190	RAB5A	P20339	215 aa		10.46	□□□□□ -0.73
IRF3-231	ENST00000602190	ORMDL3	Q8N138	153 aa		10.46	□□□□□ -0.73
IRF3-231	ENST00000602190	C2orf88	Q9BSF0	95 aa		10.46	□□□□□ -0.73
IRF3-231	ENST00000602190	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.46	□□□□□ -0.73
IRF3-231	ENST00000602190	TOMM7	Q9P0U1	55 aa		10.46	□□□□□ -0.73
IRF3-231	ENST00000602190	IGIP	A6NJ69	53 aa		10.45	□□□□□ -0.74
IRF3-231	ENST00000602190	RPL37AP8	A6NKH3	93 aa		10.45	□□□□□ -0.74
IRF3-231	ENST00000602190	CXCL5	P42830	114 aa		10.45	□□□□□ -0.74
IRF3-231	ENST00000602190	PPDPF	Q9H3Y8	114 aa		10.45	□□□□□ -0.74
IRF3-231	ENST00000602190	MRPL54	Q6P161	138 aa	Known RBP	10.44	□□□□□ -0.74
IRF3-231	ENST00000602190	ASB16-AS1	Q495Z4	193 aa		10.43	□□□□□ -0.74
IRF3-231	ENST00000602190	TMEM136	Q6ZRR5	245 aa		10.43	□□□□□ -0.74
IRF3-231	ENST00000602190	PRELID3A	Q96N28	172 aa		10.43	□□□□□ -0.74
IRF3-231	ENST00000602190	KRTAP4-1	Q9BYQ7	146 aa		10.43	□□□□□ -0.74
IRF3-231	ENST00000602190	CDKN2A-AS1	Q9UH64	79 aa		10.43	□□□□□ -0.74
IRF3-231	ENST00000602190	NAT8	Q9UHE5	227 aa		10.43	□□□□□ -0.74
IRF3-231	ENST00000602190	CYSLTR1	Q9Y271	337 aa		10.43	□□□□□ -0.74
IRF3-231	ENST00000602190	LAMTOR2	Q9Y2Q5	125 aa		10.43	□□□□□ -0.74
IRF3-231	ENST00000602190	PNRC1	Q12796	327 aa	Predicted RBP	10.42	□□□□□ -0.74
IRF3-231	ENST00000602190	ADIRF	Q15847	76 aa		10.42	□□□□□ -0.74
IRF3-231	ENST00000602190		C9JQL5	133 aa		10.41	□□□□□ -0.74
IRF3-231	ENST00000602190	HERVK_113	P63121	156 aa		10.41	□□□□□ -0.74
IRF3-231	ENST00000602190	VCX2	Q9H322	139 aa		10.41	□□□□□ -0.74
IRF3-231	ENST00000602190	FSIP2	Q5CZC0	6907 aa		10.41	□□□□□ -0.74
IRF3-231	ENST00000602190	IGKV2D-26	A0A0A0MRZ7	120 aa		10.4	□□□□□ -0.74
IRF3-231	ENST00000602190	SEC11A	P67812	179 aa		10.4	□□□□□ -0.74
IRF3-231	ENST00000602190	KRTAP13-3	Q3SY46	172 aa		10.4	□□□□□ -0.74
IRF3-231	ENST00000602190	FP248	Q71RG6	208 aa	Predicted RBP	10.4	□□□□□ -0.74
IRF3-231	ENST00000602190	ATP5L2	Q7Z4Y8	100 aa		10.4	□□□□□ -0.74
IRF3-231	ENST00000602190	SMIM1	B2RUZ4	78 aa		10.39	□□□□□ -0.75
IRF3-231	ENST00000602190	UBE2A	P49459	152 aa		10.39	□□□□□ -0.75
IRF3-231	ENST00000602190		Q8N8P6	123 aa		10.39	□□□□□ -0.75
IRF3-231	ENST00000602190		K7EMI3	77 aa		10.38	□□□□□ -0.75
IRF3-231	ENST00000602190	LINC01547	P58512	204 aa	Predicted RBP	10.38	□□□□□ -0.75
IRF3-231	ENST00000602190	GAGE10	A6NGK3	116 aa		10.37	□□□□□ -0.75
IRF3-231	ENST00000602190	IGLV5-45	A0A087WSX0	123 aa		10.36	□□□□□ -0.75
IRF3-231	ENST00000602190	C3orf22	Q8N5N4	141 aa		10.36	□□□□□ -0.75
IRF3-231	ENST00000602190	MAP1LC3A	Q9H492	121 aa		10.36	□□□□□ -0.75
IRF3-231	ENST00000602190	ORMDL2	Q53FV1	153 aa		10.35	□□□□□ -0.75
IRF3-231	ENST00000602190	SPAG11A	Q6PDA7	123 aa		10.35	□□□□□ -0.75
IRF3-231	ENST00000602190	PLEKHB2	Q96CS7	222 aa		10.35	□□□□□ -0.75
IRF3-231	ENST00000602190	TIMM17A	Q99595	171 aa		10.35	□□□□□ -0.75
IRF3-231	ENST00000602190	PRLH	P81277	87 aa		10.34	□□□□□ -0.75
IRF3-231	ENST00000602190	PDZD11	Q5EBL8	140 aa		10.34	□□□□□ -0.75
IRF3-231	ENST00000602190	LOC389332	A0A1B0GUA5	103 aa		10.33	□□□□□ -0.76
IRF3-231	ENST00000602190	SRSF3	P84103	164 aa	Known RBP	10.32	□□□□□ -0.76
IRF3-231	ENST00000602190	PAPPA-AS1	Q5QFB9	102 aa		10.32	□□□□□ -0.76
IRF3-231	ENST00000602190	LCE2C	Q5TA81	110 aa		10.32	□□□□□ -0.76
IRF3-231	ENST00000602190	NKAPP1	Q8N9T2	125 aa		10.32	□□□□□ -0.76
IRF3-231	ENST00000602190	COX7B2	Q8TF08	81 aa		10.32	□□□□□ -0.76
IRF3-231	ENST00000602190	TMEM126A	Q9H061	195 aa		10.32	□□□□□ -0.76
IRF3-231	ENST00000602190	GEMIN7	Q9H840	131 aa	Known RBP	10.32	□□□□□ -0.76
IRF3-231	ENST00000602190	IGKV2-28	A0A075B6P5	120 aa		10.31	□□□□□ -0.76
IRF3-231	ENST00000602190	SCO1	O75880	301 aa		10.31	□□□□□ -0.76
IRF3-231	ENST00000602190	IGKV2D-28	P01615	120 aa		10.31	□□□□□ -0.76
IRF3-231	ENST00000602190	VPREB1	P12018	145 aa		10.31	□□□□□ -0.76
IRF3-231	ENST00000602190		M0R378	163 aa		10.3	□□□□□ -0.76
IRF3-231	ENST00000602190	TINCR	A0A1B0GVN0	87 aa		10.29	□□□□□ -0.76
IRF3-231	ENST00000602190	TOMM6	Q96B49	74 aa		10.29	□□□□□ -0.76
IRF3-231	ENST00000602190	GNB1L	Q9BYB4	327 aa		10.28	□□□□□ -0.76
IRF3-231	ENST00000602190	NXT2	Q9NPJ8	142 aa	Known RBP	10.28	□□□□□ -0.76
IRF3-231	ENST00000602190	TMEM238	C9JI98	176 aa		10.27	□□□□□ -0.77
IRF3-231	ENST00000602190	KRTAP19-2	Q3LHN2	52 aa		10.27	□□□□□ -0.77
IRF3-231	ENST00000602190	FAM19A1	Q7Z5A9	133 aa		10.27	□□□□□ -0.77
IRF3-231	ENST00000602190	SEC61B	P60468	96 aa	Known RBP	10.26	□□□□□ -0.77
IRF3-231	ENST00000602190	AKAP14	Q86UN6	197 aa		10.26	□□□□□ -0.77
IRF3-231	ENST00000602190	LINC00337	Q8N6G1	96 aa		10.26	□□□□□ -0.77
IRF3-231	ENST00000602190	ERAS	Q7Z444	233 aa		10.25	□□□□□ -0.77
IRF3-231	ENST00000602190		Q8NDZ9	215 aa		10.25	□□□□□ -0.77
IRF3-231	ENST00000602190	SPRR4	Q96PI1	79 aa		10.25	□□□□□ -0.77
IRF3-231	ENST00000602190	G0S2	P27469	103 aa		10.24	□□□□□ -0.77
IRF3-231	ENST00000602190	RAB5B	P61020	215 aa		10.24	□□□□□ -0.77
IRF3-231	ENST00000602190	PEA15	Q15121	130 aa		10.24	□□□□□ -0.77
IRF3-231	ENST00000602190	CBLN2	Q8IUK8	224 aa		10.22	□□□□□ -0.77
IRF3-231	ENST00000602190	IGLV5-39	A0A0G2JS06	123 aa		10.21	□□□□□ -0.77
IRF3-231	ENST00000602190	SND1-IT1	Q9HBX3	110 aa		10.21	□□□□□ -0.77
IRF3-231	ENST00000602190	LINC01546	A6NGU7	62 aa		10.2	□□□□□ -0.78
IRF3-231	ENST00000602190	SPINK8	P0C7L1	97 aa		10.2	□□□□□ -0.78
IRF3-231	ENST00000602190	ADCYAP1	P18509	176 aa		10.2	□□□□□ -0.78
IRF3-231	ENST00000602190	XP32	Q5T750	250 aa		10.2	□□□□□ -0.78
IRF3-231	ENST00000602190	ATP5L	O75964	103 aa		10.19	□□□□□ -0.78
IRF3-231	ENST00000602190	SPINK1	P00995	79 aa		10.19	□□□□□ -0.78
IRF3-231	ENST00000602190		Q8NBF4	154 aa		10.19	□□□□□ -0.78
IRF3-231	ENST00000602190	MRPL18	Q9H0U6	180 aa	Known RBP	10.19	□□□□□ -0.78
IRF3-231	ENST00000602190	CST9L	Q9H4G1	147 aa		10.19	□□□□□ -0.78
IRF3-231	ENST00000602190	RPS29	P62273	56 aa	Known RBP	10.18	□□□□□ -0.78
IRF3-231	ENST00000602190	SCGB3A1	Q96QR1	104 aa		10.18	□□□□□ -0.78
IRF3-231	ENST00000602190	HIGD2A	Q9BW72	106 aa		10.18	□□□□□ -0.78
IRF3-231	ENST00000602190	LINC01549	A6NIU2	74 aa		10.17	□□□□□ -0.78
IRF3-231	ENST00000602190	MT1H	P80294	61 aa		10.17	□□□□□ -0.78
IRF3-231	ENST00000602190	RPL24	P83731	157 aa	Known RBP	10.17	□□□□□ -0.78
IRF3-231	ENST00000602190	COX17	Q14061	63 aa		10.17	□□□□□ -0.78
IRF3-231	ENST00000602190	C4orf48	Q5BLP8	95 aa		10.16	□□□□□ -0.78
IRF3-231	ENST00000602190	DAND5	Q8N907	189 aa		10.16	□□□□□ -0.78
IRF3-231	ENST00000602190	ERG28	Q9UKR5	140 aa		10.16	□□□□□ -0.78
IRF3-231	ENST00000602190	PFN2	P35080	140 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms