RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 VAMP8Q9BV40 100 aa9.48□□□□□ -0.89
USE1-210ENST00000601662 CXCL5P42830 114 aa9.47□□□□□ -0.89
USE1-210ENST00000601662 CKS1BP61024 79 aa9.47□□□□□ -0.89
USE1-210ENST00000601662 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
USE1-210ENST00000601662 J3QQQ9 107 aa9.46□□□□□ -0.9
USE1-210ENST00000601662 LGALS3P17931 250 aaKnown RBP9.46□□□□□ -0.9
USE1-210ENST00000601662 NMUP48645 174 aa9.46□□□□□ -0.9
USE1-210ENST00000601662 WFDC2Q14508 124 aa9.46□□□□□ -0.9
USE1-210ENST00000601662 KIAA0087Q14695 138 aa9.46□□□□□ -0.9
USE1-210ENST00000601662 HIGD2BQ4VC39 106 aa9.46□□□□□ -0.9
USE1-210ENST00000601662 NTN5Q8WTR8 489 aaPredicted RBP9.46□□□□□ -0.9
USE1-210ENST00000601662 RYR1P21817 5038 aa9.46□□□□□ -0.9
USE1-210ENST00000601662 IGLV5-52A0A0A0MRZ9 124 aa9.45□□□□□ -0.9
USE1-210ENST00000601662 ANKRD39Q53RE8 183 aa9.45□□□□□ -0.9
USE1-210ENST00000601662 Q8N814 137 aa9.45□□□□□ -0.9
USE1-210ENST00000601662 NDUFA1O15239 70 aa9.44□□□□□ -0.9
USE1-210ENST00000601662 MAJINQ3KP22 176 aa9.44□□□□□ -0.9
USE1-210ENST00000601662 CDPF1Q6NVV7 123 aa9.44□□□□□ -0.9
USE1-210ENST00000601662 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.43□□□□□ -0.9
USE1-210ENST00000601662 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
USE1-210ENST00000601662 SPATA45Q537H7 98 aa9.43□□□□□ -0.9
USE1-210ENST00000601662 CAMK2N2Q96S95 79 aa9.43□□□□□ -0.9
USE1-210ENST00000601662 PAM16Q9Y3D7 125 aa9.43□□□□□ -0.9
USE1-210ENST00000601662 IGKV2D-26A0A0A0MRZ7 120 aa9.42□□□□□ -0.9
USE1-210ENST00000601662 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
USE1-210ENST00000601662 GCSHP23434 173 aa9.42□□□□□ -0.9
USE1-210ENST00000601662 KRTAP10-1P60331 282 aa9.42□□□□□ -0.9
USE1-210ENST00000601662 HERV-K104P63124 156 aa9.42□□□□□ -0.9
USE1-210ENST00000601662 SYCNQ0VAF6 134 aa9.42□□□□□ -0.9
USE1-210ENST00000601662 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
USE1-210ENST00000601662 LINC00587B1AMM8 73 aa9.41□□□□□ -0.9
USE1-210ENST00000601662 CDK2AP2O75956 126 aa9.41□□□□□ -0.9
USE1-210ENST00000601662 CNBPP62633 177 aaKnown RBP9.41□□□□□ -0.9
USE1-210ENST00000601662 LINC00526Q96FQ7 95 aa9.41□□□□□ -0.9
USE1-210ENST00000601662 APOBP04114 4563 aaKnown RBP9.4□□□□□ -0.9
USE1-210ENST00000601662 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
USE1-210ENST00000601662 TSPEAR-AS2P59090 65 aa9.4□□□□□ -0.9
USE1-210ENST00000601662 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
USE1-210ENST00000601662 UNQ6190/PRO20217Q6UXQ8 127 aa9.4□□□□□ -0.9
USE1-210ENST00000601662 ZNF625Q96I27 306 aaPredicted RBP9.4□□□□□ -0.9
USE1-210ENST00000601662 HSPG2P98160 4391 aa9.4□□□□□ -0.91
USE1-210ENST00000601662 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
USE1-210ENST00000601662 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
USE1-210ENST00000601662 CARD19Q96LW7 228 aa9.39□□□□□ -0.91
USE1-210ENST00000601662 COX8AP10176 69 aa9.38□□□□□ -0.91
USE1-210ENST00000601662 Q6ZRU5 148 aa9.38□□□□□ -0.91
USE1-210ENST00000601662 C12orf57Q99622 126 aa9.38□□□□□ -0.91
USE1-210ENST00000601662 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
USE1-210ENST00000601662 DLEU1O43261 78 aa9.37□□□□□ -0.91
USE1-210ENST00000601662 SLPIP03973 132 aa9.37□□□□□ -0.91
USE1-210ENST00000601662 CIRBPQ14011 172 aaKnown RBP9.37□□□□□ -0.91
USE1-210ENST00000601662 COX17Q14061 63 aa9.37□□□□□ -0.91
USE1-210ENST00000601662 PCP2Q8IVA1 136 aa9.37□□□□□ -0.91
USE1-210ENST00000601662 LINC01620Q4KN68 170 aa9.36□□□□□ -0.91
USE1-210ENST00000601662 C10orf25Q5T742 122 aa9.36□□□□□ -0.91
USE1-210ENST00000601662 BOD1L2Q8IYS8 172 aa9.36□□□□□ -0.91
USE1-210ENST00000601662 HAMPP81172 84 aa9.35□□□□□ -0.91
USE1-210ENST00000601662 MEIG1Q5JSS6 88 aa9.35□□□□□ -0.91
USE1-210ENST00000601662 SLC25A34Q6PIV7 304 aa9.35□□□□□ -0.91
USE1-210ENST00000601662 SCGB1D4Q6XE38 83 aa9.35□□□□□ -0.91
USE1-210ENST00000601662 LINC00518Q8N0U6 118 aa9.35□□□□□ -0.91
USE1-210ENST00000601662 C9orf163Q8N9P6 203 aa9.35□□□□□ -0.91
USE1-210ENST00000601662 C14orf144Q96I85 54 aa9.35□□□□□ -0.91
USE1-210ENST00000601662 C6orf48Q9UBA6 75 aa9.35□□□□□ -0.91
USE1-210ENST00000601662 A0A0J9YXY3 114 aa9.34□□□□□ -0.91
USE1-210ENST00000601662 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
USE1-210ENST00000601662 TTTY13Q9BZ97 58 aa9.34□□□□□ -0.91
USE1-210ENST00000601662 ERG28Q9UKR5 140 aa9.34□□□□□ -0.91
USE1-210ENST00000601662 TIMM17BO60830 172 aa9.33□□□□□ -0.92
USE1-210ENST00000601662 XGP55808 180 aa9.33□□□□□ -0.92
USE1-210ENST00000601662 LOC107984640A0A0U1RRK4 108 aa9.32□□□□□ -0.92
USE1-210ENST00000601662 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
USE1-210ENST00000601662 LINC00158P58513 81 aa9.32□□□□□ -0.92
USE1-210ENST00000601662 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
USE1-210ENST00000601662 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
USE1-210ENST00000601662 UQCR10Q9UDW1 63 aa9.32□□□□□ -0.92
USE1-210ENST00000601662 NDUFC2-KCTD14E9PQ53 114 aa9.31□□□□□ -0.92
USE1-210ENST00000601662 PFN2P35080 140 aa9.31□□□□□ -0.92
USE1-210ENST00000601662 C9orf116Q5BN46 136 aaPredicted RBP9.31□□□□□ -0.92
USE1-210ENST00000601662 TMEM238C9JI98 176 aa9.3□□□□□ -0.92
USE1-210ENST00000601662 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
USE1-210ENST00000601662 SMIM13P0DJ93 91 aa9.3□□□□□ -0.92
USE1-210ENST00000601662 DNAH8Q96JB1 4490 aa9.29□□□□□ -0.92
USE1-210ENST00000601662 TSTD3H0UI37 97 aa9.29□□□□□ -0.92
USE1-210ENST00000601662 Q6ZVH6 145 aa9.29□□□□□ -0.92
USE1-210ENST00000601662 Q8N1X5 172 aa9.29□□□□□ -0.92
USE1-210ENST00000601662 HIGD1BQ9P298 99 aa9.29□□□□□ -0.92
USE1-210ENST00000601662 SDIM1Q6ZPB5 146 aa9.28□□□□□ -0.92
USE1-210ENST00000601662 MIEN1Q9BRT3 115 aa9.28□□□□□ -0.92
USE1-210ENST00000601662 ABCA13Q86UQ4 5058 aa9.27□□□□□ -0.93
USE1-210ENST00000601662 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
USE1-210ENST00000601662 RPL18AQ02543 176 aaKnown RBP9.27□□□□□ -0.93
USE1-210ENST00000601662 COPS9Q8WXC6 57 aa9.27□□□□□ -0.93
USE1-210ENST00000601662 PRO1933Q9H354 126 aa9.27□□□□□ -0.93
USE1-210ENST00000601662 LINC00474Q9P2X8 69 aa9.27□□□□□ -0.93
USE1-210ENST00000601662 PCLOQ9Y6V0 5065 aa9.27□□□□□ -0.93
USE1-210ENST00000601662 SRSF9Q13242 221 aaKnown RBP eCLIP9.26□□□□□ -0.93
USE1-210ENST00000601662 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
USE1-210ENST00000601662 LITAFQ99732 161 aa9.26□□□□□ -0.93
USE1-210ENST00000601662 SPANXB1Q9NS25 103 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms