RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 AMELXQ99217 191 aa9.67□□□□□ -0.86
USE1-208ENST00000600970 A0A1B0GXF2 115 aa9.66□□□□□ -0.86
USE1-208ENST00000600970 F8VRH5 84 aa9.66□□□□□ -0.86
USE1-208ENST00000600970 ORMDL3Q8N138 153 aa9.66□□□□□ -0.86
USE1-208ENST00000600970 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
USE1-208ENST00000600970 TMEM136Q6ZRR5 245 aa9.65□□□□□ -0.86
USE1-208ENST00000600970 PRELID3AQ96N28 172 aa9.65□□□□□ -0.86
USE1-208ENST00000600970 GAGE10A6NGK3 116 aa9.64□□□□□ -0.87
USE1-208ENST00000600970 UBE2AP49459 152 aa9.64□□□□□ -0.87
USE1-208ENST00000600970 C2orf66Q6UXQ4 117 aa9.64□□□□□ -0.87
USE1-208ENST00000600970 FAM19A3Q7Z5A8 133 aa9.64□□□□□ -0.87
USE1-208ENST00000600970 VCX2Q9H322 139 aa9.64□□□□□ -0.87
USE1-208ENST00000600970 NAT8Q9UHE5 227 aa9.64□□□□□ -0.87
USE1-208ENST00000600970 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
USE1-208ENST00000600970 PRSS47A8MTI9 375 aa9.63□□□□□ -0.87
USE1-208ENST00000600970 CTAG1AP78358 180 aa9.63□□□□□ -0.87
USE1-208ENST00000600970 PPDPFQ9H3Y8 114 aa9.63□□□□□ -0.87
USE1-208ENST00000600970 CDKN2A-AS1Q9UH64 79 aa9.63□□□□□ -0.87
USE1-208ENST00000600970 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
USE1-208ENST00000600970 LOC389332A0A1B0GUA5 103 aa9.62□□□□□ -0.87
USE1-208ENST00000600970 PNRC1Q12796 327 aaPredicted RBP9.61□□□□□ -0.87
USE1-208ENST00000600970 IGLV5-37A0A075B6J1 123 aa9.6□□□□□ -0.87
USE1-208ENST00000600970 IGIPA6NJ69 53 aa9.6□□□□□ -0.87
USE1-208ENST00000600970 C9JQL5 133 aa9.6□□□□□ -0.87
USE1-208ENST00000600970 CXCL5P42830 114 aa9.6□□□□□ -0.87
USE1-208ENST00000600970 HERVK_113P63121 156 aa9.6□□□□□ -0.87
USE1-208ENST00000600970 NPSP0C0P6 89 aa9.59□□□□□ -0.87
USE1-208ENST00000600970 MAP1LC3AQ9H492 121 aa9.59□□□□□ -0.87
USE1-208ENST00000600970 CRCT1Q9UGL9 99 aa9.59□□□□□ -0.87
USE1-208ENST00000600970 LINC01547P58512 204 aaPredicted RBP9.58□□□□□ -0.88
USE1-208ENST00000600970 SEC11AP67812 179 aa9.58□□□□□ -0.88
USE1-208ENST00000600970 Q8N8P6 123 aa9.58□□□□□ -0.88
USE1-208ENST00000600970 ATP5L2Q7Z4Y8 100 aa9.57□□□□□ -0.88
USE1-208ENST00000600970 NKAPP1Q8N9T2 125 aa9.57□□□□□ -0.88
USE1-208ENST00000600970 GEMIN7Q9H840 131 aaKnown RBP9.57□□□□□ -0.88
USE1-208ENST00000600970 LAMTOR2Q9Y2Q5 125 aa9.57□□□□□ -0.88
USE1-208ENST00000600970 IGKV2-28A0A075B6P5 120 aa9.56□□□□□ -0.88
USE1-208ENST00000600970 SCO1O75880 301 aa9.56□□□□□ -0.88
USE1-208ENST00000600970 IGKV2D-28P01615 120 aa9.56□□□□□ -0.88
USE1-208ENST00000600970 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
USE1-208ENST00000600970 C3orf22Q8N5N4 141 aa9.56□□□□□ -0.88
USE1-208ENST00000600970 SMIM1B2RUZ4 78 aa9.55□□□□□ -0.88
USE1-208ENST00000600970 PRLHP81277 87 aa9.55□□□□□ -0.88
USE1-208ENST00000600970 FSIP2Q5CZC0 6907 aa9.54□□□□□ -0.88
USE1-208ENST00000600970 RAB5BP61020 215 aa9.54□□□□□ -0.88
USE1-208ENST00000600970 SRSF3P84103 164 aaKnown RBP9.54□□□□□ -0.88
USE1-208ENST00000600970 ASB16-AS1Q495Z4 193 aa9.54□□□□□ -0.88
USE1-208ENST00000600970 COX7B2Q8TF08 81 aa9.54□□□□□ -0.88
USE1-208ENST00000600970 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
USE1-208ENST00000600970 FAM19A1Q7Z5A9 133 aa9.53□□□□□ -0.88
USE1-208ENST00000600970 KRTAP4-1Q9BYQ7 146 aa9.53□□□□□ -0.88
USE1-208ENST00000600970 K7EMI3 77 aa9.52□□□□□ -0.89
USE1-208ENST00000600970 PDZD11Q5EBL8 140 aa9.52□□□□□ -0.89
USE1-208ENST00000600970 FP248Q71RG6 208 aaPredicted RBP9.52□□□□□ -0.89
USE1-208ENST00000600970 AKAP14Q86UN6 197 aa9.52□□□□□ -0.89
USE1-208ENST00000600970 LINC00337Q8N6G1 96 aa9.52□□□□□ -0.89
USE1-208ENST00000600970 PLEKHB2Q96CS7 222 aa9.52□□□□□ -0.89
USE1-208ENST00000600970 KRTAP13-3Q3SY46 172 aa9.51□□□□□ -0.89
USE1-208ENST00000600970 SPAG11AQ6PDA7 123 aa9.51□□□□□ -0.89
USE1-208ENST00000600970 TIMM17AQ99595 171 aa9.51□□□□□ -0.89
USE1-208ENST00000600970 TMEM126AQ9H061 195 aa9.51□□□□□ -0.89
USE1-208ENST00000600970 TMEM238C9JI98 176 aa9.5□□□□□ -0.89
USE1-208ENST00000600970 PEA15Q15121 130 aa9.5□□□□□ -0.89
USE1-208ENST00000600970 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
USE1-208ENST00000600970 NXT2Q9NPJ8 142 aaKnown RBP9.48□□□□□ -0.89
USE1-208ENST00000600970 IGLV5-45A0A087WSX0 123 aa9.47□□□□□ -0.89
USE1-208ENST00000600970 TINCRA0A1B0GVN0 87 aa9.47□□□□□ -0.89
USE1-208ENST00000600970 M0R378 163 aa9.47□□□□□ -0.89
USE1-208ENST00000600970 VPREB1P12018 145 aa9.47□□□□□ -0.89
USE1-208ENST00000600970 SPINK8P0C7L1 97 aa9.46□□□□□ -0.9
USE1-208ENST00000600970 G0S2P27469 103 aa9.46□□□□□ -0.9
USE1-208ENST00000600970 CBLN2Q8IUK8 224 aa9.46□□□□□ -0.9
USE1-208ENST00000600970 ERASQ7Z444 233 aa9.45□□□□□ -0.9
USE1-208ENST00000600970 GNB1LQ9BYB4 327 aa9.45□□□□□ -0.9
USE1-208ENST00000600970 PFN2P35080 140 aa9.44□□□□□ -0.9
USE1-208ENST00000600970 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
USE1-208ENST00000600970 C4orf48Q5BLP8 95 aa9.44□□□□□ -0.9
USE1-208ENST00000600970 SCGB3A1Q96QR1 104 aa9.44□□□□□ -0.9
USE1-208ENST00000600970 HIGD2AQ9BW72 106 aa9.44□□□□□ -0.9
USE1-208ENST00000600970 ATP5LO75964 103 aa9.43□□□□□ -0.9
USE1-208ENST00000600970 ADCYAP1P18509 176 aa9.43□□□□□ -0.9
USE1-208ENST00000600970 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
USE1-208ENST00000600970 SND1-IT1Q9HBX3 110 aa9.42□□□□□ -0.9
USE1-208ENST00000600970 DAND5Q8N907 189 aa9.41□□□□□ -0.9
USE1-208ENST00000600970 Q8NDZ9 215 aa9.41□□□□□ -0.9
USE1-208ENST00000600970 hCG_2014768A0A024R1R8 64 aa9.4□□□□□ -0.9
USE1-208ENST00000600970 RPL24P83731 157 aaKnown RBP9.4□□□□□ -0.9
USE1-208ENST00000600970 Q8NBF4 154 aa9.4□□□□□ -0.9
USE1-208ENST00000600970 CST9LQ9H4G1 147 aa9.4□□□□□ -0.9
USE1-208ENST00000600970 RAB14P61106 215 aa9.39□□□□□ -0.91
USE1-208ENST00000600970 MRPL18Q9H0U6 180 aaKnown RBP9.39□□□□□ -0.91
USE1-208ENST00000600970 ERG28Q9UKR5 140 aa9.38□□□□□ -0.91
USE1-208ENST00000600970 LCE2CQ5TA81 110 aa9.37□□□□□ -0.91
USE1-208ENST00000600970 H3BRM9 83 aa9.36□□□□□ -0.91
USE1-208ENST00000600970 SPINK1P00995 79 aa9.36□□□□□ -0.91
USE1-208ENST00000600970 PMVKQ15126 192 aa9.36□□□□□ -0.91
USE1-208ENST00000600970 KIAA1644Q3SXP7 199 aa9.36□□□□□ -0.91
USE1-208ENST00000600970 ANAPC16Q96DE5 110 aa9.36□□□□□ -0.91
USE1-208ENST00000600970 ZNF706Q9Y5V0 76 aaPredicted RBP9.36□□□□□ -0.91
USE1-208ENST00000600970 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms