RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ZNF561-AS1K7EIQ3 104 aa7.59□□□□□ -1.19
CHMP2A-207ENST00000600804 LECT2O14960 151 aa7.59□□□□□ -1.19
CHMP2A-207ENST00000600804 SPAG11BQ08648 103 aa7.59□□□□□ -1.19
CHMP2A-207ENST00000600804 CDPF1Q6NVV7 123 aa7.59□□□□□ -1.19
CHMP2A-207ENST00000600804 ORAOV1Q8WV07 137 aa7.59□□□□□ -1.19
CHMP2A-207ENST00000600804 SPINK8P0C7L1 97 aa7.58□□□□□ -1.2
CHMP2A-207ENST00000600804 CXCL5P42830 114 aa7.58□□□□□ -1.2
CHMP2A-207ENST00000600804 PMCHL2Q9BQD1 86 aa7.58□□□□□ -1.2
CHMP2A-207ENST00000600804 FUSP35637 526 aaKnown RBP eCLIP7.57□□□□□ -1.2
CHMP2A-207ENST00000600804 HERVK_113P61574 105 aa7.57□□□□□ -1.2
CHMP2A-207ENST00000600804 SFTA2Q6UW10 78 aa7.57□□□□□ -1.2
CHMP2A-207ENST00000600804 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.56□□□□□ -1.2
CHMP2A-207ENST00000600804 SLPIP03973 132 aa7.56□□□□□ -1.2
CHMP2A-207ENST00000600804 PRSS2P07478 247 aa7.56□□□□□ -1.2
CHMP2A-207ENST00000600804 JOSD1Q15040 202 aaPredicted RBP7.56□□□□□ -1.2
CHMP2A-207ENST00000600804 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
CHMP2A-207ENST00000600804 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
CHMP2A-207ENST00000600804 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
CHMP2A-207ENST00000600804 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
CHMP2A-207ENST00000600804 LRP1Q07954 4544 aaKnown RBP7.55□□□□□ -1.2
CHMP2A-207ENST00000600804 E9PLD3 99 aa7.55□□□□□ -1.2
CHMP2A-207ENST00000600804 XGP55808 180 aa7.55□□□□□ -1.2
CHMP2A-207ENST00000600804 RNF151Q2KHN1 245 aa7.55□□□□□ -1.2
CHMP2A-207ENST00000600804 C6orf226Q5I0X4 101 aa7.55□□□□□ -1.2
CHMP2A-207ENST00000600804 PLEKHB2Q96CS7 222 aa7.55□□□□□ -1.2
CHMP2A-207ENST00000600804 TRBV30A0A0K0K1B3 111 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 NDUFA1O15239 70 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 LEPROTO15243 131 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 SCGB1D1O95968 90 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 SYCNQ0VAF6 134 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 C9orf163Q8N9P6 203 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 CARD19Q96LW7 228 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 CAMK2N2Q96S95 79 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 TOMM7Q9P0U1 55 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 HMCN2Q8NDA2 5059 aa7.54□□□□□ -1.2
CHMP2A-207ENST00000600804 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
CHMP2A-207ENST00000600804 EPM2AB3EWF7 344 aa7.53□□□□□ -1.2
CHMP2A-207ENST00000600804 INAFM2P0DMQ5 153 aa7.53□□□□□ -1.2
CHMP2A-207ENST00000600804 CKS1BP61024 79 aa7.53□□□□□ -1.2
CHMP2A-207ENST00000600804 PKIGQ9Y2B9 76 aa7.53□□□□□ -1.2
CHMP2A-207ENST00000600804 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.52□□□□□ -1.21
CHMP2A-207ENST00000600804 IGLV5-52A0A0A0MRZ9 124 aa7.52□□□□□ -1.21
CHMP2A-207ENST00000600804 NMUP48645 174 aa7.52□□□□□ -1.21
CHMP2A-207ENST00000600804 Q6ZRU5 148 aa7.52□□□□□ -1.21
CHMP2A-207ENST00000600804 STPG4Q8N801 248 aa7.52□□□□□ -1.21
CHMP2A-207ENST00000600804 LINC00526Q96FQ7 95 aa7.52□□□□□ -1.21
CHMP2A-207ENST00000600804 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
CHMP2A-207ENST00000600804 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.21
CHMP2A-207ENST00000600804 J3QQQ9 107 aa7.51□□□□□ -1.21
CHMP2A-207ENST00000600804 TLX1NBP0CAT3 122 aa7.51□□□□□ -1.21
CHMP2A-207ENST00000600804 UNQ6190/PRO20217Q6UXQ8 127 aa7.51□□□□□ -1.21
CHMP2A-207ENST00000600804 HSBP1L1C9JCN9 74 aa7.5□□□□□ -1.21
CHMP2A-207ENST00000600804 HERV-K104P63124 156 aa7.5□□□□□ -1.21
CHMP2A-207ENST00000600804 PYY3Q5JQD4 70 aa7.5□□□□□ -1.21
CHMP2A-207ENST00000600804 C10orf25Q5T742 122 aa7.5□□□□□ -1.21
CHMP2A-207ENST00000600804 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
CHMP2A-207ENST00000600804 Q5VSD8 79 aa7.5□□□□□ -1.21
CHMP2A-207ENST00000600804 C2orf82Q6UX34 121 aa7.5□□□□□ -1.21
CHMP2A-207ENST00000600804 ATOH7Q8N100 152 aa7.5□□□□□ -1.21
CHMP2A-207ENST00000600804 C6orf48Q9UBA6 75 aa7.5□□□□□ -1.21
CHMP2A-207ENST00000600804 MYMXA0A1B0GTQ4 84 aa7.49□□□□□ -1.21
CHMP2A-207ENST00000600804 LGALS3P17931 250 aaKnown RBP7.49□□□□□ -1.21
CHMP2A-207ENST00000600804 TSPEAR-AS2P59090 65 aa7.49□□□□□ -1.21
CHMP2A-207ENST00000600804 COX17Q14061 63 aa7.49□□□□□ -1.21
CHMP2A-207ENST00000600804 ANKRD39Q53RE8 183 aa7.49□□□□□ -1.21
CHMP2A-207ENST00000600804 NDUFA12Q9UI09 145 aa7.49□□□□□ -1.21
CHMP2A-207ENST00000600804 IGKV2D-26A0A0A0MRZ7 120 aa7.48□□□□□ -1.21
CHMP2A-207ENST00000600804 LINC00587B1AMM8 73 aa7.48□□□□□ -1.21
CHMP2A-207ENST00000600804 GCSHP23434 173 aa7.48□□□□□ -1.21
CHMP2A-207ENST00000600804 KRTAP10-1P60331 282 aa7.48□□□□□ -1.21
CHMP2A-207ENST00000600804 SDIM1Q6ZPB5 146 aa7.48□□□□□ -1.21
CHMP2A-207ENST00000600804 LOC105371267A0A1B0GV96 52 aa7.47□□□□□ -1.21
CHMP2A-207ENST00000600804 LOC107984640A0A0U1RRK4 108 aa7.46□□□□□ -1.22
CHMP2A-207ENST00000600804 NDUFC2-KCTD14E9PQ53 114 aa7.46□□□□□ -1.22
CHMP2A-207ENST00000600804 MAJINQ3KP22 176 aa7.46□□□□□ -1.22
CHMP2A-207ENST00000600804 SMR3BP02814 79 aaPredicted RBP7.45□□□□□ -1.22
CHMP2A-207ENST00000600804 HAMPP81172 84 aa7.45□□□□□ -1.22
CHMP2A-207ENST00000600804 CIRBPQ14011 172 aaKnown RBP7.45□□□□□ -1.22
CHMP2A-207ENST00000600804 Q6ZSA8 131 aa7.45□□□□□ -1.22
CHMP2A-207ENST00000600804 VAMP8Q9BV40 100 aa7.45□□□□□ -1.22
CHMP2A-207ENST00000600804 LINC00474Q9P2X8 69 aa7.45□□□□□ -1.22
CHMP2A-207ENST00000600804 ERG28Q9UKR5 140 aa7.45□□□□□ -1.22
CHMP2A-207ENST00000600804 SMIM6P0DI80 62 aa7.44□□□□□ -1.22
CHMP2A-207ENST00000600804 C9orf116Q5BN46 136 aaPredicted RBP7.44□□□□□ -1.22
CHMP2A-207ENST00000600804 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
CHMP2A-207ENST00000600804 ZNF815PA8K554 130 aa7.43□□□□□ -1.22
CHMP2A-207ENST00000600804 DLEU1O43261 78 aa7.43□□□□□ -1.22
CHMP2A-207ENST00000600804 TIMM17BO60830 172 aa7.43□□□□□ -1.22
CHMP2A-207ENST00000600804 PTTG1IPP53801 180 aa7.43□□□□□ -1.22
CHMP2A-207ENST00000600804 Q6ZRP5 223 aa7.43□□□□□ -1.22
CHMP2A-207ENST00000600804 A0A0J9YXY3 114 aa7.42□□□□□ -1.22
CHMP2A-207ENST00000600804 COX8AP10176 69 aa7.42□□□□□ -1.22
CHMP2A-207ENST00000600804 LINC01620Q4KN68 170 aa7.42□□□□□ -1.22
CHMP2A-207ENST00000600804 SPATA45Q537H7 98 aa7.42□□□□□ -1.22
CHMP2A-207ENST00000600804 PCP2Q8IVA1 136 aa7.42□□□□□ -1.22
CHMP2A-207ENST00000600804 A0A096LNI7 61 aa7.41□□□□□ -1.22
CHMP2A-207ENST00000600804 MEIG1Q5JSS6 88 aa7.41□□□□□ -1.22
CHMP2A-207ENST00000600804 BOD1L2Q8IYS8 172 aa7.41□□□□□ -1.22
CHMP2A-207ENST00000600804 SPACA4Q8TDM5 124 aa7.41□□□□□ -1.22
CHMP2A-207ENST00000600804 TTTY13Q9BZ97 58 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms