RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 LRRK2Q5S007 2527 aa11.3□□□□□ -0.6
SYDE1-204ENST00000600440 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
SYDE1-204ENST00000600440 TRBV6-4A0A1B0GX49 114 aa11.29□□□□□ -0.6
SYDE1-204ENST00000600440 JMJD7-PLA2G4BH0Y9G9 81 aa11.29□□□□□ -0.6
SYDE1-204ENST00000600440 BRK1Q8WUW1 75 aa11.29□□□□□ -0.6
SYDE1-204ENST00000600440 M0R2N4 97 aa11.29□□□□□ -0.6
SYDE1-204ENST00000600440 PRO0628Q9UI54 55 aa11.29□□□□□ -0.6
SYDE1-204ENST00000600440 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
SYDE1-204ENST00000600440 TMEM86BQ8N661 226 aa11.28□□□□□ -0.6
SYDE1-204ENST00000600440 Q8N814 137 aa11.28□□□□□ -0.6
SYDE1-204ENST00000600440 IBA57-AS1B1ANH7 110 aa11.28□□□□□ -0.6
SYDE1-204ENST00000600440 MSMBP08118 114 aa11.28□□□□□ -0.6
SYDE1-204ENST00000600440 C11orf44Q8N8P7 122 aa11.28□□□□□ -0.6
SYDE1-204ENST00000600440 SERP1Q9Y6X1 66 aa11.28□□□□□ -0.6
SYDE1-204ENST00000600440 STHQ8IWL8 128 aa11.27□□□□□ -0.6
SYDE1-204ENST00000600440 FAM208BQ5VWN6 2430 aa11.27□□□□□ -0.61
SYDE1-204ENST00000600440 NDUFC2-KCTD14E9PQ53 114 aa11.26□□□□□ -0.61
SYDE1-204ENST00000600440 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
SYDE1-204ENST00000600440 UCNP55089 124 aa11.26□□□□□ -0.61
SYDE1-204ENST00000600440 UTP20O75691 2785 aaKnown RBP11.26□□□□□ -0.61
SYDE1-204ENST00000600440 ACACBO00763 2458 aa11.26□□□□□ -0.61
SYDE1-204ENST00000600440 TRGV4A0A0C4DH28 118 aa11.25□□□□□ -0.61
SYDE1-204ENST00000600440 C6orf99Q4VX62 202 aa11.25□□□□□ -0.61
SYDE1-204ENST00000600440 ATP5EP2Q5VTU8 51 aa11.25□□□□□ -0.61
SYDE1-204ENST00000600440 LYPD5Q6UWN5 251 aa11.25□□□□□ -0.61
SYDE1-204ENST00000600440 FAM19A3Q7Z5A8 133 aa11.25□□□□□ -0.61
SYDE1-204ENST00000600440 C1orf158Q8N1D5 194 aa11.25□□□□□ -0.61
SYDE1-204ENST00000600440 MPLKIPQ8TAP9 179 aa11.25□□□□□ -0.61
SYDE1-204ENST00000600440 IGHV3OR16-9A0A0B4J2B5 98 aa11.24□□□□□ -0.61
SYDE1-204ENST00000600440 A0A096LNT2 108 aa11.23□□□□□ -0.61
SYDE1-204ENST00000600440 TRBV10-1A0A0K0K1A3 114 aa11.23□□□□□ -0.61
SYDE1-204ENST00000600440 CCL19Q99731 98 aa11.23□□□□□ -0.61
SYDE1-204ENST00000600440 C9orf116Q5BN46 136 aaPredicted RBP11.23□□□□□ -0.61
SYDE1-204ENST00000600440 NF1P21359 2839 aa11.23□□□□□ -0.61
SYDE1-204ENST00000600440 TRAV7A0A075B6U4 112 aa11.22□□□□□ -0.61
SYDE1-204ENST00000600440 FP248Q71RG6 208 aaPredicted RBP11.22□□□□□ -0.61
SYDE1-204ENST00000600440 A0A096LPF7 62 aa11.22□□□□□ -0.61
SYDE1-204ENST00000600440 CCDC168Q8NDH2 2452 aa11.22□□□□□ -0.61
SYDE1-204ENST00000600440 A0A1W2PRX2 142 aa11.22□□□□□ -0.61
SYDE1-204ENST00000600440 LINC01547P58512 204 aaPredicted RBP11.22□□□□□ -0.61
SYDE1-204ENST00000600440 ANKRD17O75179 2603 aaKnown RBP11.21□□□□□ -0.62
SYDE1-204ENST00000600440 APCP25054 2843 aa11.2□□□□□ -0.62
SYDE1-204ENST00000600440 FLNCQ14315 2725 aa11.2□□□□□ -0.62
SYDE1-204ENST00000600440 CACNA1AO00555 2505 aa11.2□□□□□ -0.62
SYDE1-204ENST00000600440 GCN1Q92616 2671 aaKnown RBP11.2□□□□□ -0.62
SYDE1-204ENST00000600440 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
SYDE1-204ENST00000600440 TM2D3Q9BRN9 247 aa11.2□□□□□ -0.62
SYDE1-204ENST00000600440 SETXQ7Z333 2677 aaKnown RBP11.19□□□□□ -0.62
SYDE1-204ENST00000600440 A0A087WZ39 114 aa11.19□□□□□ -0.62
SYDE1-204ENST00000600440 ZNF843Q8N446 348 aa11.19□□□□□ -0.62
SYDE1-204ENST00000600440 SPATA3Q8NHX4 192 aa11.19□□□□□ -0.62
SYDE1-204ENST00000600440 MYO18BQ8IUG5 2567 aa11.19□□□□□ -0.62
SYDE1-204ENST00000600440 IGLV10-54A0A075B6I4 117 aa11.19□□□□□ -0.62
SYDE1-204ENST00000600440 Q8N3U1 123 aa11.19□□□□□ -0.62
SYDE1-204ENST00000600440 SMIM26A0A096LP01 95 aa11.18□□□□□ -0.62
SYDE1-204ENST00000600440 ODF3L2Q3SX64 289 aa11.18□□□□□ -0.62
SYDE1-204ENST00000600440 Q6ZVQ6 151 aa11.18□□□□□ -0.62
SYDE1-204ENST00000600440 ABCA12Q86UK0 2595 aa11.18□□□□□ -0.62
SYDE1-204ENST00000600440 TRBV7-6A0A0J9YX20 115 aa11.18□□□□□ -0.62
SYDE1-204ENST00000600440 CFAP46Q8IYW2 2715 aa11.17□□□□□ -0.62
SYDE1-204ENST00000600440 WFDC10AQ9H1F0 79 aa11.17□□□□□ -0.62
SYDE1-204ENST00000600440 LINC00959A0A1B0GUT2 108 aa11.17□□□□□ -0.62
SYDE1-204ENST00000600440 LY6G6DO95868 133 aa11.16□□□□□ -0.62
SYDE1-204ENST00000600440 TEX15Q9BXT5 2789 aa11.16□□□□□ -0.62
SYDE1-204ENST00000600440 DEFB114Q30KQ6 69 aa11.16□□□□□ -0.62
SYDE1-204ENST00000600440 TRBV6-8A0A0A6YYG3 113 aa11.15□□□□□ -0.62
SYDE1-204ENST00000600440 DEFB130BP0DP73 79 aa11.15□□□□□ -0.62
SYDE1-204ENST00000600440 DEFB130AP0DP74 79 aa11.15□□□□□ -0.62
SYDE1-204ENST00000600440 B4DSR2 109 aa11.15□□□□□ -0.62
SYDE1-204ENST00000600440 Q6ZQT0 140 aa11.15□□□□□ -0.62
SYDE1-204ENST00000600440 LINC00269Q8N2A0 174 aa11.15□□□□□ -0.63
SYDE1-204ENST00000600440 PKD1L2Q7Z442 2459 aa11.14□□□□□ -0.63
SYDE1-204ENST00000600440 CR1P17927 2039 aa11.14□□□□□ -0.63
SYDE1-204ENST00000600440 Q8N9L7 120 aa11.14□□□□□ -0.63
SYDE1-204ENST00000600440 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
SYDE1-204ENST00000600440 DAD1P61803 113 aa11.13□□□□□ -0.63
SYDE1-204ENST00000600440 Q6ZQY7 126 aa11.13□□□□□ -0.63
SYDE1-204ENST00000600440 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
SYDE1-204ENST00000600440 TRBV10-3A0A0K0K1G6 114 aa11.13□□□□□ -0.63
SYDE1-204ENST00000600440 KLKP1Q107X0 134 aa11.13□□□□□ -0.63
SYDE1-204ENST00000600440 AKAP9Q99996 3911 aa11.12□□□□□ -0.63
SYDE1-204ENST00000600440 LINC00482Q8N8I6 264 aa11.12□□□□□ -0.63
SYDE1-204ENST00000600440 Q8NDZ9 215 aa11.11□□□□□ -0.63
SYDE1-204ENST00000600440 PIEZO1Q92508 2521 aa11.11□□□□□ -0.63
SYDE1-204ENST00000600440 MIFP14174 115 aa11.1□□□□□ -0.63
SYDE1-204ENST00000600440 LINC00167Q96N53 147 aa11.1□□□□□ -0.63
SYDE1-204ENST00000600440 FAM229BQ4G0N7 80 aa11.1□□□□□ -0.63
SYDE1-204ENST00000600440 GNLYP22749 145 aa11.09□□□□□ -0.63
SYDE1-204ENST00000600440 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
SYDE1-204ENST00000600440 LINC00575Q6W349 94 aa11.09□□□□□ -0.63
SYDE1-204ENST00000600440 LRCOL1A6NCL2 159 aa11.08□□□□□ -0.64
SYDE1-204ENST00000600440 C1orf195Q5TG92 126 aa11.08□□□□□ -0.64
SYDE1-204ENST00000600440 NBPF19A0A087WUL8 3843 aa11.08□□□□□ -0.64
SYDE1-204ENST00000600440 EPM2AB3EWF7 344 aa11.07□□□□□ -0.64
SYDE1-204ENST00000600440 NREPQ16612 68 aa11.07□□□□□ -0.64
SYDE1-204ENST00000600440 IL17DQ8TAD2 202 aa11.07□□□□□ -0.64
SYDE1-204ENST00000600440 MTORP42345 2549 aa11.07□□□□□ -0.64
SYDE1-204ENST00000600440 GYPEP15421 78 aa11.05□□□□□ -0.64
SYDE1-204ENST00000600440 Q8IZM0 81 aa11.05□□□□□ -0.64
SYDE1-204ENST00000600440 TMEM254Q8TBM7 123 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms