RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 CCKP06307 115 aa13.53□□□□□ -0.24
ARHGEF1-218ENST00000599589 ITPR3Q14573 2671 aa13.52□□□□□ -0.24
ARHGEF1-218ENST00000599589 IGHV3OR16-9A0A0B4J2B5 98 aa13.52□□□□□ -0.24
ARHGEF1-218ENST00000599589 C11orf68Q9H3H3 251 aaKnown RBP13.52□□□□□ -0.24
ARHGEF1-218ENST00000599589 WFDC9Q8NEX5 89 aa13.52□□□□□ -0.25
ARHGEF1-218ENST00000599589 TRBV6-4A0A1B0GX49 114 aa13.51□□□□□ -0.25
ARHGEF1-218ENST00000599589 TENM4Q6N022 2769 aa13.5□□□□□ -0.25
ARHGEF1-218ENST00000599589 ZNF469Q96JG9 3925 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF1-218ENST00000599589 NOTCH3Q9UM47 2321 aa13.49□□□□□ -0.25
ARHGEF1-218ENST00000599589 TLN2Q9Y4G6 2542 aa13.49□□□□□ -0.25
ARHGEF1-218ENST00000599589 FHL2Q14192 279 aa13.49□□□□□ -0.25
ARHGEF1-218ENST00000599589 ESM1Q9NQ30 184 aa13.49□□□□□ -0.25
ARHGEF1-218ENST00000599589 NBPF19A0A087WUL8 3843 aa13.49□□□□□ -0.25
ARHGEF1-218ENST00000599589 CHD6Q8TD26 2715 aa13.49□□□□□ -0.25
ARHGEF1-218ENST00000599589 LY6G6DO95868 133 aa13.48□□□□□ -0.25
ARHGEF1-218ENST00000599589 A0A087WZ39 114 aa13.48□□□□□ -0.25
ARHGEF1-218ENST00000599589 KRTAP1-1Q07627 177 aa13.48□□□□□ -0.25
ARHGEF1-218ENST00000599589 TRGV2A0A075B6R0 118 aa13.47□□□□□ -0.25
ARHGEF1-218ENST00000599589 GHRHP01286 108 aa13.47□□□□□ -0.25
ARHGEF1-218ENST00000599589 MYO9AB2RTY4 2548 aa13.47□□□□□ -0.25
ARHGEF1-218ENST00000599589 TRAV23DV6A0A075B6W5 121 aa13.46□□□□□ -0.25
ARHGEF1-218ENST00000599589 CCDC168Q8NDH2 2452 aa13.46□□□□□ -0.25
ARHGEF1-218ENST00000599589 FAM19A1Q7Z5A9 133 aa13.45□□□□□ -0.26
ARHGEF1-218ENST00000599589 C6orf226Q5I0X4 101 aa13.45□□□□□ -0.26
ARHGEF1-218ENST00000599589 SONP18583 2426 aaKnown RBP13.45□□□□□ -0.26
ARHGEF1-218ENST00000599589 C4orf26Q17RF5 130 aa13.44□□□□□ -0.26
ARHGEF1-218ENST00000599589 S100A7L2Q5SY68 101 aa13.44□□□□□ -0.26
ARHGEF1-218ENST00000599589 ENHOQ6UWT2 76 aa13.44□□□□□ -0.26
ARHGEF1-218ENST00000599589 WNK1Q9H4A3 2382 aa13.44□□□□□ -0.26
ARHGEF1-218ENST00000599589 PRR3P79522 188 aaKnown RBP13.43□□□□□ -0.26
ARHGEF1-218ENST00000599589 FLNAP21333 2647 aaKnown RBP13.43□□□□□ -0.26
ARHGEF1-218ENST00000599589 JMJD7-PLA2G4BH0Y9G9 81 aa13.43□□□□□ -0.26
ARHGEF1-218ENST00000599589 LINC00167Q96N53 147 aa13.43□□□□□ -0.26
ARHGEF1-218ENST00000599589 TRBV6-8A0A0A6YYG3 113 aa13.43□□□□□ -0.26
ARHGEF1-218ENST00000599589 TRGV4A0A0C4DH28 118 aa13.43□□□□□ -0.26
ARHGEF1-218ENST00000599589 Q8N814 137 aa13.43□□□□□ -0.26
ARHGEF1-218ENST00000599589 AKAP9Q99996 3911 aa13.42□□□□□ -0.26
ARHGEF1-218ENST00000599589 PLAC8L1A1L4L8 177 aa13.42□□□□□ -0.26
ARHGEF1-218ENST00000599589 C11orf44Q8N8P7 122 aa13.42□□□□□ -0.26
ARHGEF1-218ENST00000599589 PDZD2O15018 2839 aa13.42□□□□□ -0.26
ARHGEF1-218ENST00000599589 KMT2BQ9UMN6 2715 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF1-218ENST00000599589 NANOS2P60321 138 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-218ENST00000599589 LINC00959A0A1B0GUT2 108 aa13.41□□□□□ -0.26
ARHGEF1-218ENST00000599589 A0A1W2PRX2 142 aa13.41□□□□□ -0.26
ARHGEF1-218ENST00000599589 RNASE1P07998 156 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-218ENST00000599589 ATP5EP2Q5VTU8 51 aa13.41□□□□□ -0.26
ARHGEF1-218ENST00000599589 Q5XG85 94 aa13.41□□□□□ -0.26
ARHGEF1-218ENST00000599589 CCL24O00175 119 aa13.4□□□□□ -0.26
ARHGEF1-218ENST00000599589 C16orf95Q9H693 158 aa13.4□□□□□ -0.26
ARHGEF1-218ENST00000599589 TMEM256-PLSCR3K7ERE1 68 aa13.39□□□□□ -0.27
ARHGEF1-218ENST00000599589 TRAV25A0A0B4J276 109 aa13.39□□□□□ -0.27
ARHGEF1-218ENST00000599589 XCL1P47992 114 aa13.39□□□□□ -0.27
ARHGEF1-218ENST00000599589 HRCT1Q6UXD1 115 aa13.39□□□□□ -0.27
ARHGEF1-218ENST00000599589 LINC01006Q8NI28 216 aa13.39□□□□□ -0.27
ARHGEF1-218ENST00000599589 GIG44P09565 113 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF1-218ENST00000599589 LYPD5Q6UWN5 251 aa13.38□□□□□ -0.27
ARHGEF1-218ENST00000599589 C16orf74Q96GX8 76 aa13.38□□□□□ -0.27
ARHGEF1-218ENST00000599589 WIPF1O43516 503 aa13.37□□□□□ -0.27
ARHGEF1-218ENST00000599589 C20orf197Q8N268 126 aa13.37□□□□□ -0.27
ARHGEF1-218ENST00000599589 NDUFC2O95298 119 aa13.37□□□□□ -0.27
ARHGEF1-218ENST00000599589 UBL5Q9BZL1 73 aa13.36□□□□□ -0.27
ARHGEF1-218ENST00000599589 WFDC10AQ9H1F0 79 aa13.35□□□□□ -0.27
ARHGEF1-218ENST00000599589 HELZ2Q9BYK8 2649 aaKnown RBP13.34□□□□□ -0.27
ARHGEF1-218ENST00000599589 NDUFC2-KCTD14E9PQ53 114 aa13.34□□□□□ -0.27
ARHGEF1-218ENST00000599589 RPL35AP18077 110 aaKnown RBP13.33□□□□□ -0.28
ARHGEF1-218ENST00000599589 CLPSL2Q6UWE3 100 aa13.33□□□□□ -0.28
ARHGEF1-218ENST00000599589 Q8IZM0 81 aa13.33□□□□□ -0.28
ARHGEF1-218ENST00000599589 ACANP16112 2415 aa13.32□□□□□ -0.28
ARHGEF1-218ENST00000599589 TRBV10-3A0A0K0K1G6 114 aa13.31□□□□□ -0.28
ARHGEF1-218ENST00000599589 ITPR2Q14571 2701 aa13.31□□□□□ -0.28
ARHGEF1-218ENST00000599589 JMJD1CQ15652 2540 aa13.3□□□□□ -0.28
ARHGEF1-218ENST00000599589 C6orf99Q4VX62 202 aa13.3□□□□□ -0.28
ARHGEF1-218ENST00000599589 UNC79Q9P2D8 2635 aa13.29□□□□□ -0.28
ARHGEF1-218ENST00000599589 FAM236DA0A1B0GTK5 79 aa13.29□□□□□ -0.28
ARHGEF1-218ENST00000599589 FAM236CP0DP71 79 aa13.29□□□□□ -0.28
ARHGEF1-218ENST00000599589 SETXQ7Z333 2677 aaKnown RBP13.28□□□□□ -0.28
ARHGEF1-218ENST00000599589 NF1P21359 2839 aa13.28□□□□□ -0.28
ARHGEF1-218ENST00000599589 Q6ZQT0 140 aa13.27□□□□□ -0.29
ARHGEF1-218ENST00000599589 ANK3Q12955 4377 aaKnown RBP13.27□□□□□ -0.29
ARHGEF1-218ENST00000599589 NIPBLQ6KC79 2804 aaeCLIP13.26□□□□□ -0.29
ARHGEF1-218ENST00000599589 M0R2N4 97 aa13.26□□□□□ -0.29
ARHGEF1-218ENST00000599589 CMC4P56277 68 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF1-218ENST00000599589 C9orf116Q5BN46 136 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF1-218ENST00000599589 Q8NDZ9 215 aa13.26□□□□□ -0.29
ARHGEF1-218ENST00000599589 SMR3AQ99954 134 aa13.26□□□□□ -0.29
ARHGEF1-218ENST00000599589 RBM3P98179 157 aaKnown RBP13.26□□□□□ -0.29
ARHGEF1-218ENST00000599589 CSNK1G2-AS1Q8NCQ2 148 aa13.25□□□□□ -0.29
ARHGEF1-218ENST00000599589 H7BZZ5 65 aa13.24□□□□□ -0.29
ARHGEF1-218ENST00000599589 DEFB130BP0DP73 79 aa13.24□□□□□ -0.29
ARHGEF1-218ENST00000599589 DEFB130AP0DP74 79 aa13.24□□□□□ -0.29
ARHGEF1-218ENST00000599589 LINC00575Q6W349 94 aa13.24□□□□□ -0.29
ARHGEF1-218ENST00000599589 TRAV7A0A075B6U4 112 aa13.23□□□□□ -0.29
ARHGEF1-218ENST00000599589 LINC01547P58512 204 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF1-218ENST00000599589 KIAA0087Q14695 138 aa13.23□□□□□ -0.29
ARHGEF1-218ENST00000599589 LAMTOR3Q9UHA4 124 aa13.23□□□□□ -0.29
ARHGEF1-218ENST00000599589 GYPEP15421 78 aa13.23□□□□□ -0.29
ARHGEF1-218ENST00000599589 HAMPP81172 84 aa13.23□□□□□ -0.29
ARHGEF1-218ENST00000599589 MTORP42345 2549 aa13.22□□□□□ -0.29
ARHGEF1-218ENST00000599589 A0A096LPF7 62 aa13.22□□□□□ -0.29
ARHGEF1-218ENST00000599589 TRAV10A0A0B4J240 114 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms