RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 IGLV5-45A0A087WSX0 123 aa14.25□□□□□ -0.13
IRF3-220ENST00000598108 PRSS2P07478 247 aa14.25□□□□□ -0.13
IRF3-220ENST00000598108 TLX1NBP0CAT3 122 aa14.25□□□□□ -0.13
IRF3-220ENST00000598108 C9orf116Q5BN46 136 aaPredicted RBP14.25□□□□□ -0.13
IRF3-220ENST00000598108 C6orf226Q5I0X4 101 aa14.24□□□□□ -0.13
IRF3-220ENST00000598108 Q8IZM0 81 aa14.24□□□□□ -0.13
IRF3-220ENST00000598108 PACRGQ96M98 296 aaPredicted RBP14.24□□□□□ -0.13
IRF3-220ENST00000598108 TRBV30A0A0K0K1B3 111 aa14.23□□□□□ -0.13
IRF3-220ENST00000598108 SMIM1B2RUZ4 78 aa14.23□□□□□ -0.13
IRF3-220ENST00000598108 DMBT1Q9UGM3 2413 aaPredicted RBP14.23□□□□□ -0.13
IRF3-220ENST00000598108 FAT3Q8TDW7 4589 aa14.22□□□□□ -0.13
IRF3-220ENST00000598108 TRGC2P03986 189 aa14.22□□□□□ -0.13
IRF3-220ENST00000598108 NDUFA6P56556 154 aa14.22□□□□□ -0.13
IRF3-220ENST00000598108 CKS1BP61024 79 aa14.21□□□□□ -0.13
IRF3-220ENST00000598108 GAGE2EQ4V326 116 aa14.21□□□□□ -0.13
IRF3-220ENST00000598108 GAGE2DQ9UEU5 116 aa14.21□□□□□ -0.13
IRF3-220ENST00000598108 KRTAP29-1A8MX34 341 aaPredicted RBP14.2□□□□□ -0.14
IRF3-220ENST00000598108 FAM168BA1KXE4 195 aa14.19□□□□□ -0.14
IRF3-220ENST00000598108 COLCA2A8K830 154 aa14.19□□□□□ -0.14
IRF3-220ENST00000598108 SPINK8P0C7L1 97 aa14.19□□□□□ -0.14
IRF3-220ENST00000598108 IGLC3P0DOY3 106 aa14.19□□□□□ -0.14
IRF3-220ENST00000598108 PRR3P79522 188 aaKnown RBP14.19□□□□□ -0.14
IRF3-220ENST00000598108 CHCHD1Q96BP2 118 aaKnown RBP14.19□□□□□ -0.14
IRF3-220ENST00000598108 ATP5LO75964 103 aa14.18□□□□□ -0.14
IRF3-220ENST00000598108 NDUFC2-KCTD14E9PQ53 114 aa14.17□□□□□ -0.14
IRF3-220ENST00000598108 PHF5AQ7RTV0 110 aaKnown RBP14.16□□□□□ -0.14
IRF3-220ENST00000598108 BAGE3Q86Y29 109 aa14.16□□□□□ -0.14
IRF3-220ENST00000598108 KRTAP7-1Q8IUC3 87 aa14.16□□□□□ -0.14
IRF3-220ENST00000598108 COX7B2Q8TF08 81 aa14.16□□□□□ -0.14
IRF3-220ENST00000598108 F8VRH5 84 aa14.15□□□□□ -0.14
IRF3-220ENST00000598108 J3QL48 77 aa14.15□□□□□ -0.14
IRF3-220ENST00000598108 ZNF22P17026 224 aaPredicted RBP14.14□□□□□ -0.15
IRF3-220ENST00000598108 C9orf129Q5T035 196 aaKnown RBP14.14□□□□□ -0.15
IRF3-220ENST00000598108 H3BRM9 83 aa14.13□□□□□ -0.15
IRF3-220ENST00000598108 FAM19A2Q8N3H0 131 aa14.13□□□□□ -0.15
IRF3-220ENST00000598108 SCO1O75880 301 aa14.12□□□□□ -0.15
IRF3-220ENST00000598108 OXTP01178 125 aa14.12□□□□□ -0.15
IRF3-220ENST00000598108 CXCL5P42830 114 aa14.12□□□□□ -0.15
IRF3-220ENST00000598108 LINC00310P59036 64 aa14.12□□□□□ -0.15
IRF3-220ENST00000598108 FAM19A5Q7Z5A7 132 aaPredicted RBP14.12□□□□□ -0.15
IRF3-220ENST00000598108 C11orf86A6NJI1 115 aa14.11□□□□□ -0.15
IRF3-220ENST00000598108 IFI27L1Q96BM0 104 aa14.11□□□□□ -0.15
IRF3-220ENST00000598108 IGLV5-39A0A0G2JS06 123 aa14.1□□□□□ -0.15
IRF3-220ENST00000598108 HSBP1O75506 76 aa14.09□□□□□ -0.15
IRF3-220ENST00000598108 KRTAP11-1Q8IUC1 163 aa14.09□□□□□ -0.15
IRF3-220ENST00000598108 SERF1AO75920 110 aa14.08□□□□□ -0.16
IRF3-220ENST00000598108 XAGE1AQ9HD64 81 aa14.08□□□□□ -0.16
IRF3-220ENST00000598108 PSORS1C2Q9UIG4 136 aa14.08□□□□□ -0.16
IRF3-220ENST00000598108 CHTOPQ9Y3Y2 248 aaKnown RBP14.08□□□□□ -0.16
IRF3-220ENST00000598108 NUPR1O60356 82 aa14.07□□□□□ -0.16
IRF3-220ENST00000598108 SRSF9Q13242 221 aaKnown RBP eCLIP14.06□□□□□ -0.16
IRF3-220ENST00000598108 TRAV12-1A0A0B4J245 112 aa14.05□□□□□ -0.16
IRF3-220ENST00000598108 TMEM170BQ5T4T1 132 aa14.05□□□□□ -0.16
IRF3-220ENST00000598108 SERTAD4-AS1Q5TG53 156 aa14.04□□□□□ -0.16
IRF3-220ENST00000598108 M0QXV9 152 aa14.03□□□□□ -0.16
IRF3-220ENST00000598108 SPINK6Q6UWN8 80 aa14.01□□□□□ -0.17
IRF3-220ENST00000598108 MT1HL1P0DM35 61 aa14□□□□□ -0.17
IRF3-220ENST00000598108 C1orf137Q5JT78 98 aa14□□□□□ -0.17
IRF3-220ENST00000598108 LEPROTL1O95214 131 aa13.99□□□□□ -0.17
IRF3-220ENST00000598108 C22orf24Q9Y442 160 aa13.99□□□□□ -0.17
IRF3-220ENST00000598108 TMEM223A0PJW6 202 aa13.98□□□□□ -0.17
IRF3-220ENST00000598108 H0Y8G0 127 aa13.97□□□□□ -0.17
IRF3-220ENST00000598108 ODF1Q14990 250 aa13.97□□□□□ -0.17
IRF3-220ENST00000598108 FABP4P15090 132 aa13.96□□□□□ -0.17
IRF3-220ENST00000598108 PFN2P35080 140 aa13.96□□□□□ -0.17
IRF3-220ENST00000598108 UBE2BP63146 152 aa13.96□□□□□ -0.17
IRF3-220ENST00000598108 ZNF625Q96I27 306 aaPredicted RBP13.96□□□□□ -0.17
IRF3-220ENST00000598108 IGLV7-43P04211 117 aa13.94□□□□□ -0.18
IRF3-220ENST00000598108 TNXBP22105 4242 aa13.94□□□□□ -0.18
IRF3-220ENST00000598108 HIST1H2BKO60814 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST1H2BJP06899 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST1H2BOP23527 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST1H2BBP33778 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST1H2BDP58876 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST1H2BCP62807 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST2H2BEQ16778 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST1H2BHQ93079 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST1H2BNQ99877 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HIST1H2BMQ99879 126 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 HSPB8Q9UJY1 196 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 ERG28Q9UKR5 140 aa13.93□□□□□ -0.18
IRF3-220ENST00000598108 LINC01600Q96MT4 127 aa13.91□□□□□ -0.18
IRF3-220ENST00000598108 TP73-AS1Q9UF72 201 aa13.91□□□□□ -0.18
IRF3-220ENST00000598108 PLA2G2DQ9UNK4 145 aa13.91□□□□□ -0.18
IRF3-220ENST00000598108 LBHQ53QV2 105 aaPredicted RBP13.9□□□□□ -0.18
IRF3-220ENST00000598108 MRPL55Q7Z7F7 128 aaKnown RBP13.89□□□□□ -0.19
IRF3-220ENST00000598108 SND1-IT1Q9HBX3 110 aa13.89□□□□□ -0.19
IRF3-220ENST00000598108 SFTA2Q6UW10 78 aa13.88□□□□□ -0.19
IRF3-220ENST00000598108 REG3GQ6UW15 175 aa13.88□□□□□ -0.19
IRF3-220ENST00000598108 PMCHL2Q9BQD1 86 aa13.88□□□□□ -0.19
IRF3-220ENST00000598108 COX17Q14061 63 aa13.87□□□□□ -0.19
IRF3-220ENST00000598108 LINC00167Q96N53 147 aa13.87□□□□□ -0.19
IRF3-220ENST00000598108 IGLV5-37A0A075B6J1 123 aa13.86□□□□□ -0.19
IRF3-220ENST00000598108 GAGE10A6NGK3 116 aa13.85□□□□□ -0.19
IRF3-220ENST00000598108 RPL37AP8A6NKH3 93 aa13.85□□□□□ -0.19
IRF3-220ENST00000598108 PLNP26678 52 aa13.84□□□□□ -0.19
IRF3-220ENST00000598108 A0A0U1RRA0 63 aa13.83□□□□□ -0.2
IRF3-220ENST00000598108 DPM2O94777 84 aa13.83□□□□□ -0.2
IRF3-220ENST00000598108 LINC00158P58513 81 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms