RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 Q6ZUT4 128 aa8.28□□□□□ -1.08
IRF3-218ENST00000597369 CHCHD5Q9BSY4 110 aa8.28□□□□□ -1.08
IRF3-218ENST00000597369 C11orf86A6NJI1 115 aa8.27□□□□□ -1.09
IRF3-218ENST00000597369 ZNF25P17030 456 aaPredicted RBP8.27□□□□□ -1.09
IRF3-218ENST00000597369 NMUP48645 174 aa8.27□□□□□ -1.09
IRF3-218ENST00000597369 HERVK_113P61574 105 aa8.27□□□□□ -1.09
IRF3-218ENST00000597369 LINC00469Q8N7U9 141 aa8.27□□□□□ -1.09
IRF3-218ENST00000597369 FAM104AQ969W3 186 aa8.27□□□□□ -1.09
IRF3-218ENST00000597369 GAGE6Q13070 117 aa8.26□□□□□ -1.09
IRF3-218ENST00000597369 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
IRF3-218ENST00000597369 DLEU1O43261 78 aa8.25□□□□□ -1.09
IRF3-218ENST00000597369 RNASE13Q5GAN3 156 aaKnown RBP8.25□□□□□ -1.09
IRF3-218ENST00000597369 TMEM170BQ5T4T1 132 aa8.25□□□□□ -1.09
IRF3-218ENST00000597369 CDC42SE2Q9NRR3 84 aa8.25□□□□□ -1.09
IRF3-218ENST00000597369 TINCRA0A1B0GVN0 87 aa8.24□□□□□ -1.09
IRF3-218ENST00000597369 E9PLD3 99 aa8.24□□□□□ -1.09
IRF3-218ENST00000597369 BOD1L2Q8IYS8 172 aa8.24□□□□□ -1.09
IRF3-218ENST00000597369 UBE2D1P51668 147 aa8.23□□□□□ -1.09
IRF3-218ENST00000597369 SEC11AP67812 179 aa8.23□□□□□ -1.09
IRF3-218ENST00000597369 RMI2Q96E14 147 aa8.23□□□□□ -1.09
IRF3-218ENST00000597369 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
IRF3-218ENST00000597369 IGKV2D-26A0A0A0MRZ7 120 aa8.22□□□□□ -1.09
IRF3-218ENST00000597369 TMEM262E9PQX1 116 aa8.22□□□□□ -1.09
IRF3-218ENST00000597369 ZNF22P17026 224 aaPredicted RBP8.22□□□□□ -1.09
IRF3-218ENST00000597369 FAM19A3Q7Z5A8 133 aa8.22□□□□□ -1.09
IRF3-218ENST00000597369 PCP2Q8IVA1 136 aa8.22□□□□□ -1.09
IRF3-218ENST00000597369 GEMIN7Q9H840 131 aaKnown RBP8.22□□□□□ -1.09
IRF3-218ENST00000597369 TMEM223A0PJW6 202 aa8.21□□□□□ -1.1
IRF3-218ENST00000597369 M0R143 59 aa8.21□□□□□ -1.1
IRF3-218ENST00000597369 HERVK_113P63121 156 aa8.21□□□□□ -1.1
IRF3-218ENST00000597369 C14orf177Q52M58 125 aa8.21□□□□□ -1.1
IRF3-218ENST00000597369 TRAV13-1A0A0B4J241 112 aa8.2□□□□□ -1.1
IRF3-218ENST00000597369 A0A1B0GUV1 79 aa8.2□□□□□ -1.1
IRF3-218ENST00000597369 H3BRM9 83 aa8.2□□□□□ -1.1
IRF3-218ENST00000597369 PANO1I0J062 215 aa8.2□□□□□ -1.1
IRF3-218ENST00000597369 LBHQ53QV2 105 aaPredicted RBP8.2□□□□□ -1.1
IRF3-218ENST00000597369 Q8N3U1 123 aa8.2□□□□□ -1.1
IRF3-218ENST00000597369 TP73-AS1Q9UF72 201 aa8.2□□□□□ -1.1
IRF3-218ENST00000597369 IGLV4-60A0A075B6I1 120 aa8.19□□□□□ -1.1
IRF3-218ENST00000597369 IGLV5-45A0A087WSX0 123 aa8.19□□□□□ -1.1
IRF3-218ENST00000597369 RBX1P62877 108 aa8.19□□□□□ -1.1
IRF3-218ENST00000597369 CIRBPQ14011 172 aaKnown RBP8.19□□□□□ -1.1
IRF3-218ENST00000597369 C2orf91Q6ZV80 131 aa8.19□□□□□ -1.1
IRF3-218ENST00000597369 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
IRF3-218ENST00000597369 PLEKHB2Q96CS7 222 aa8.19□□□□□ -1.1
IRF3-218ENST00000597369 MYMXA0A1B0GTQ4 84 aa8.18□□□□□ -1.1
IRF3-218ENST00000597369 LEPROTO15243 131 aa8.18□□□□□ -1.1
IRF3-218ENST00000597369 LGALS3P17931 250 aaKnown RBP8.18□□□□□ -1.1
IRF3-218ENST00000597369 MPV17L2Q567V2 206 aa8.18□□□□□ -1.1
IRF3-218ENST00000597369 LINC00242Q5T6M2 205 aa8.18□□□□□ -1.1
IRF3-218ENST00000597369 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
IRF3-218ENST00000597369 IGKV2D-24A0A075B6R9 120 aa8.17□□□□□ -1.1
IRF3-218ENST00000597369 IGHV1-58A0A0C4DH39 117 aa8.17□□□□□ -1.1
IRF3-218ENST00000597369 TTTY13Q9BZ97 58 aa8.17□□□□□ -1.1
IRF3-218ENST00000597369 HIGD1BQ9P298 99 aa8.17□□□□□ -1.1
IRF3-218ENST00000597369 IGKV3OR2-268A0A0C4DH90 116 aa8.16□□□□□ -1.1
IRF3-218ENST00000597369 ZNF815PA8K554 130 aa8.16□□□□□ -1.1
IRF3-218ENST00000597369 J3QQQ9 107 aa8.16□□□□□ -1.1
IRF3-218ENST00000597369 SDIM1Q6ZPB5 146 aa8.16□□□□□ -1.1
IRF3-218ENST00000597369 SNHG12Q9BXW3 62 aa8.16□□□□□ -1.1
IRF3-218ENST00000597369 IGHV3-64A0A075B6Q5 118 aa8.15□□□□□ -1.1
IRF3-218ENST00000597369 CCL25O15444 150 aa8.15□□□□□ -1.1
IRF3-218ENST00000597369 SPINK8P0C7L1 97 aa8.15□□□□□ -1.1
IRF3-218ENST00000597369 COX6A2Q02221 97 aa8.15□□□□□ -1.1
IRF3-218ENST00000597369 HSD52Q0P140 79 aa8.15□□□□□ -1.1
IRF3-218ENST00000597369 BATFQ16520 125 aa8.15□□□□□ -1.1
IRF3-218ENST00000597369 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
IRF3-218ENST00000597369 HINT1P49773 126 aaPredicted RBP8.14□□□□□ -1.11
IRF3-218ENST00000597369 TSPEAR-AS2P59090 65 aa8.14□□□□□ -1.11
IRF3-218ENST00000597369 SS18Q15532 418 aa8.14□□□□□ -1.11
IRF3-218ENST00000597369 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
IRF3-218ENST00000597369 ANGP03950 147 aaKnown RBP8.13□□□□□ -1.11
IRF3-218ENST00000597369 SPINK6Q6UWN8 80 aa8.13□□□□□ -1.11
IRF3-218ENST00000597369 SCGB1D4Q6XE38 83 aa8.13□□□□□ -1.11
IRF3-218ENST00000597369 REG3AQ06141 175 aa8.12□□□□□ -1.11
IRF3-218ENST00000597369 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
IRF3-218ENST00000597369 A0A087WYN8 130 aa8.11□□□□□ -1.11
IRF3-218ENST00000597369 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
IRF3-218ENST00000597369 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
IRF3-218ENST00000597369 TAL2Q16559 108 aa8.11□□□□□ -1.11
IRF3-218ENST00000597369 BVES-AS1Q5T3Y7 98 aa8.11□□□□□ -1.11
IRF3-218ENST00000597369 CLPSL2Q6UWE3 100 aa8.11□□□□□ -1.11
IRF3-218ENST00000597369 C7orf33Q8WU49 177 aa8.11□□□□□ -1.11
IRF3-218ENST00000597369 PRR3P79522 188 aaKnown RBP8.1□□□□□ -1.11
IRF3-218ENST00000597369 COL5A1-AS1Q5SY13 56 aa8.1□□□□□ -1.11
IRF3-218ENST00000597369 A0A087WZ39 114 aa8.09□□□□□ -1.11
IRF3-218ENST00000597369 IGHV3OR16-9A0A0B4J2B5 98 aa8.09□□□□□ -1.11
IRF3-218ENST00000597369 XCL1P47992 114 aa8.09□□□□□ -1.11
IRF3-218ENST00000597369 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
IRF3-218ENST00000597369 NDUFA12Q9UI09 145 aa8.09□□□□□ -1.11
IRF3-218ENST00000597369 CRPP02741 224 aa8.08□□□□□ -1.12
IRF3-218ENST00000597369 ORAOV1Q8WV07 137 aa8.08□□□□□ -1.12
IRF3-218ENST00000597369 CHCHD10Q8WYQ3 142 aaPredicted RBP8.08□□□□□ -1.12
IRF3-218ENST00000597369 DPH3Q96FX2 82 aa8.08□□□□□ -1.12
IRF3-218ENST00000597369 HIST1H4GQ99525 98 aa8.08□□□□□ -1.12
IRF3-218ENST00000597369 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
IRF3-218ENST00000597369 KLK12Q9UKR0 248 aa8.08□□□□□ -1.12
IRF3-218ENST00000597369 USP17L23D6RBM5 183 aa8.07□□□□□ -1.12
IRF3-218ENST00000597369 NDUFA1O15239 70 aa8.07□□□□□ -1.12
IRF3-218ENST00000597369 SRSF9Q13242 221 aaKnown RBP eCLIP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms