RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 USP17L23D6RBM5 183 aa7.95□□□□□ -1.14
SHKBP1-213ENST00000597325 XGP55808 180 aa7.95□□□□□ -1.14
SHKBP1-213ENST00000597325 KRTAP10-2P60368 255 aa7.95□□□□□ -1.14
SHKBP1-213ENST00000597325 LRP2P98164 4655 aa7.95□□□□□ -1.14
SHKBP1-213ENST00000597325 SPAG11BQ08648 103 aa7.95□□□□□ -1.14
SHKBP1-213ENST00000597325 Q6ZRN7 208 aaPredicted RBP7.95□□□□□ -1.14
SHKBP1-213ENST00000597325 STPG4Q8N801 248 aa7.95□□□□□ -1.14
SHKBP1-213ENST00000597325 VAMP8Q9BV40 100 aa7.95□□□□□ -1.14
SHKBP1-213ENST00000597325 TOMM7Q9P0U1 55 aa7.95□□□□□ -1.14
SHKBP1-213ENST00000597325 E9PLD3 99 aa7.94□□□□□ -1.14
SHKBP1-213ENST00000597325 C14orf177Q52M58 125 aa7.94□□□□□ -1.14
SHKBP1-213ENST00000597325 PLEKHB2Q96CS7 222 aa7.94□□□□□ -1.14
SHKBP1-213ENST00000597325 IGLV5-39A0A0G2JS06 123 aa7.93□□□□□ -1.14
SHKBP1-213ENST00000597325 ZNF561-AS1K7EIQ3 104 aa7.93□□□□□ -1.14
SHKBP1-213ENST00000597325 LECT2O14960 151 aa7.93□□□□□ -1.14
SHKBP1-213ENST00000597325 LEPROTO15243 131 aa7.93□□□□□ -1.14
SHKBP1-213ENST00000597325 LGALS3P17931 250 aaKnown RBP7.93□□□□□ -1.14
SHKBP1-213ENST00000597325 S100A12P80511 92 aa7.93□□□□□ -1.14
SHKBP1-213ENST00000597325 HIGD2BQ4VC39 106 aa7.93□□□□□ -1.14
SHKBP1-213ENST00000597325 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
SHKBP1-213ENST00000597325 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
SHKBP1-213ENST00000597325 GVQW2A0A096LPI5 108 aaPredicted RBP7.92□□□□□ -1.14
SHKBP1-213ENST00000597325 EREGO14944 169 aa7.92□□□□□ -1.14
SHKBP1-213ENST00000597325 NMUP48645 174 aa7.92□□□□□ -1.14
SHKBP1-213ENST00000597325 MAJINQ3KP22 176 aa7.92□□□□□ -1.14
SHKBP1-213ENST00000597325 C6orf226Q5I0X4 101 aa7.92□□□□□ -1.14
SHKBP1-213ENST00000597325 Q8IZM0 81 aa7.92□□□□□ -1.14
SHKBP1-213ENST00000597325 PAM16Q9Y3D7 125 aa7.92□□□□□ -1.14
SHKBP1-213ENST00000597325 KRTAP29-1A8MX34 341 aaPredicted RBP7.91□□□□□ -1.14
SHKBP1-213ENST00000597325 J3QQQ9 107 aa7.91□□□□□ -1.14
SHKBP1-213ENST00000597325 CXCL5P42830 114 aa7.91□□□□□ -1.14
SHKBP1-213ENST00000597325 CKS1BP61024 79 aa7.91□□□□□ -1.14
SHKBP1-213ENST00000597325 SPATA45Q537H7 98 aa7.91□□□□□ -1.14
SHKBP1-213ENST00000597325 ANKRD39Q53RE8 183 aa7.91□□□□□ -1.14
SHKBP1-213ENST00000597325 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
SHKBP1-213ENST00000597325 SFTA2Q6UW10 78 aa7.9□□□□□ -1.14
SHKBP1-213ENST00000597325 A0A087WTM6 91 aa7.89□□□□□ -1.15
SHKBP1-213ENST00000597325 LRCOL1A6NCL2 159 aa7.89□□□□□ -1.15
SHKBP1-213ENST00000597325 F8WDY8 70 aa7.89□□□□□ -1.15
SHKBP1-213ENST00000597325 NDUFA1O15239 70 aa7.89□□□□□ -1.15
SHKBP1-213ENST00000597325 WFDC2Q14508 124 aa7.89□□□□□ -1.15
SHKBP1-213ENST00000597325 CDPF1Q6NVV7 123 aa7.89□□□□□ -1.15
SHKBP1-213ENST00000597325 CAMK2N2Q96S95 79 aa7.89□□□□□ -1.15
SHKBP1-213ENST00000597325 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
SHKBP1-213ENST00000597325 IGKV2D-26A0A0A0MRZ7 120 aa7.88□□□□□ -1.15
SHKBP1-213ENST00000597325 TSPEAR-AS2P59090 65 aa7.88□□□□□ -1.15
SHKBP1-213ENST00000597325 NTN5Q8WTR8 489 aaPredicted RBP7.88□□□□□ -1.15
SHKBP1-213ENST00000597325 LINC00526Q96FQ7 95 aa7.88□□□□□ -1.15
SHKBP1-213ENST00000597325 C2orf48Q96LS8 159 aa7.88□□□□□ -1.15
SHKBP1-213ENST00000597325 NDUFA12Q9UI09 145 aa7.88□□□□□ -1.15
SHKBP1-213ENST00000597325 MYMXA0A1B0GTQ4 84 aa7.87□□□□□ -1.15
SHKBP1-213ENST00000597325 ZNF815PA8K554 130 aa7.87□□□□□ -1.15
SHKBP1-213ENST00000597325 KIAA0087Q14695 138 aa7.87□□□□□ -1.15
SHKBP1-213ENST00000597325 Q8N814 137 aa7.87□□□□□ -1.15
SHKBP1-213ENST00000597325 CARD19Q96LW7 228 aa7.87□□□□□ -1.15
SHKBP1-213ENST00000597325 C12orf57Q99622 126 aa7.87□□□□□ -1.15
SHKBP1-213ENST00000597325 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.86□□□□□ -1.15
SHKBP1-213ENST00000597325 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.86□□□□□ -1.15
SHKBP1-213ENST00000597325 HERV-K104P63124 156 aa7.86□□□□□ -1.15
SHKBP1-213ENST00000597325 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
SHKBP1-213ENST00000597325 C2orf82Q6UX34 121 aa7.86□□□□□ -1.15
SHKBP1-213ENST00000597325 ZNF625Q96I27 306 aaPredicted RBP7.85□□□□□ -1.15
SHKBP1-213ENST00000597325 DNAH8Q96JB1 4490 aa7.85□□□□□ -1.15
SHKBP1-213ENST00000597325 TRBV30A0A0K0K1B3 111 aa7.84□□□□□ -1.15
SHKBP1-213ENST00000597325 SMR3BP02814 79 aaPredicted RBP7.84□□□□□ -1.15
SHKBP1-213ENST00000597325 COX8AP10176 69 aa7.84□□□□□ -1.15
SHKBP1-213ENST00000597325 MEIG1Q5JSS6 88 aa7.84□□□□□ -1.15
SHKBP1-213ENST00000597325 UNQ6190/PRO20217Q6UXQ8 127 aa7.84□□□□□ -1.15
SHKBP1-213ENST00000597325 SCGB1D4Q6XE38 83 aa7.84□□□□□ -1.15
SHKBP1-213ENST00000597325 Q6ZRU5 148 aa7.84□□□□□ -1.15
SHKBP1-213ENST00000597325 PCP2Q8IVA1 136 aa7.84□□□□□ -1.15
SHKBP1-213ENST00000597325 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
SHKBP1-213ENST00000597325 CNBPP62633 177 aaKnown RBP7.83□□□□□ -1.16
SHKBP1-213ENST00000597325 C14orf144Q96I85 54 aa7.83□□□□□ -1.16
SHKBP1-213ENST00000597325 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
SHKBP1-213ENST00000597325 LINC00587B1AMM8 73 aa7.82□□□□□ -1.16
SHKBP1-213ENST00000597325 C10orf25Q5T742 122 aa7.82□□□□□ -1.16
SHKBP1-213ENST00000597325 SLC25A34Q6PIV7 304 aa7.82□□□□□ -1.16
SHKBP1-213ENST00000597325 LINC00518Q8N0U6 118 aa7.82□□□□□ -1.16
SHKBP1-213ENST00000597325 PKIGQ9Y2B9 76 aa7.82□□□□□ -1.16
SHKBP1-213ENST00000597325 A0A0J9YXY3 114 aa7.81□□□□□ -1.16
SHKBP1-213ENST00000597325 CIRBPQ14011 172 aaKnown RBP7.81□□□□□ -1.16
SHKBP1-213ENST00000597325 RNF151Q2KHN1 245 aa7.81□□□□□ -1.16
SHKBP1-213ENST00000597325 BOD1L2Q8IYS8 172 aa7.81□□□□□ -1.16
SHKBP1-213ENST00000597325 C6orf48Q9UBA6 75 aa7.81□□□□□ -1.16
SHKBP1-213ENST00000597325 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
SHKBP1-213ENST00000597325 IGLV5-52A0A0A0MRZ9 124 aa7.8□□□□□ -1.16
SHKBP1-213ENST00000597325 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
SHKBP1-213ENST00000597325 DLEU1O43261 78 aa7.8□□□□□ -1.16
SHKBP1-213ENST00000597325 SLPIP03973 132 aa7.8□□□□□ -1.16
SHKBP1-213ENST00000597325 PFN2P35080 140 aa7.8□□□□□ -1.16
SHKBP1-213ENST00000597325 UQCR10Q9UDW1 63 aa7.8□□□□□ -1.16
SHKBP1-213ENST00000597325 TNXBP22105 4242 aa7.8□□□□□ -1.16
SHKBP1-213ENST00000597325 TMEM238C9JI98 176 aa7.79□□□□□ -1.16
SHKBP1-213ENST00000597325 TSTD3H0UI37 97 aa7.79□□□□□ -1.16
SHKBP1-213ENST00000597325 LINC00158P58513 81 aa7.79□□□□□ -1.16
SHKBP1-213ENST00000597325 COX17Q14061 63 aa7.79□□□□□ -1.16
SHKBP1-213ENST00000597325 C9orf116Q5BN46 136 aaPredicted RBP7.79□□□□□ -1.16
SHKBP1-213ENST00000597325 PRO1933Q9H354 126 aa7.79□□□□□ -1.16
SHKBP1-213ENST00000597325 LOC107984640A0A0U1RRK4 108 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms