RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 TEX43Q6ZNM6 134 aa5.77□□□□□ -1.49
NOTCH3-202ENST00000595045 ATP5L2Q7Z4Y8 100 aa5.77□□□□□ -1.49
NOTCH3-202ENST00000595045 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
NOTCH3-202ENST00000595045 CRCT1Q9UGL9 99 aa5.77□□□□□ -1.49
NOTCH3-202ENST00000595045 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
NOTCH3-202ENST00000595045 COLCA2A8K830 154 aa5.76□□□□□ -1.49
NOTCH3-202ENST00000595045 ADCYAP1P18509 176 aa5.76□□□□□ -1.49
NOTCH3-202ENST00000595045 UBE2BP63146 152 aa5.76□□□□□ -1.49
NOTCH3-202ENST00000595045 C9orf129Q5T035 196 aaKnown RBP5.76□□□□□ -1.49
NOTCH3-202ENST00000595045 C2orf66Q6UXQ4 117 aa5.76□□□□□ -1.49
NOTCH3-202ENST00000595045 TOMM7Q9P0U1 55 aa5.76□□□□□ -1.49
NOTCH3-202ENST00000595045 PYGO1Q9Y3Y4 419 aa5.76□□□□□ -1.49
NOTCH3-202ENST00000595045 UBE2D1P51668 147 aa5.75□□□□□ -1.49
NOTCH3-202ENST00000595045 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
NOTCH3-202ENST00000595045 Q8N8P6 123 aa5.75□□□□□ -1.49
NOTCH3-202ENST00000595045 PACRGQ96M98 296 aaPredicted RBP5.75□□□□□ -1.49
NOTCH3-202ENST00000595045 C2orf88Q9BSF0 95 aa5.75□□□□□ -1.49
NOTCH3-202ENST00000595045 VCX2Q9H322 139 aa5.75□□□□□ -1.49
NOTCH3-202ENST00000595045 CYSLTR1Q9Y271 337 aa5.75□□□□□ -1.49
NOTCH3-202ENST00000595045 PRSS47A8MTI9 375 aa5.74□□□□□ -1.49
NOTCH3-202ENST00000595045 LINC00587B1AMM8 73 aa5.74□□□□□ -1.49
NOTCH3-202ENST00000595045 M0QXV9 152 aa5.74□□□□□ -1.49
NOTCH3-202ENST00000595045 PRSS2P07478 247 aa5.74□□□□□ -1.49
NOTCH3-202ENST00000595045 RPL13AP40429 203 aaKnown RBP5.74□□□□□ -1.49
NOTCH3-202ENST00000595045 Q6ZN92 141 aa5.74□□□□□ -1.49
NOTCH3-202ENST00000595045 CBLN2Q8IUK8 224 aa5.74□□□□□ -1.49
NOTCH3-202ENST00000595045 ANAPC16Q96DE5 110 aa5.74□□□□□ -1.49
NOTCH3-202ENST00000595045 LAMTOR2Q9Y2Q5 125 aa5.74□□□□□ -1.49
NOTCH3-202ENST00000595045 TRBV30A0A0K0K1B3 111 aa5.73□□□□□ -1.49
NOTCH3-202ENST00000595045 NDUFC2-KCTD14E9PQ53 114 aa5.73□□□□□ -1.49
NOTCH3-202ENST00000595045 TSPAN13O95857 204 aa5.73□□□□□ -1.49
NOTCH3-202ENST00000595045 KIAA1644Q3SXP7 199 aa5.73□□□□□ -1.49
NOTCH3-202ENST00000595045 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
NOTCH3-202ENST00000595045 LINC00173Q6ZV60 143 aa5.73□□□□□ -1.49
NOTCH3-202ENST00000595045 AMELXQ99217 191 aa5.73□□□□□ -1.49
NOTCH3-202ENST00000595045 CKS1BP61024 79 aa5.72□□□□□ -1.49
NOTCH3-202ENST00000595045 PNRC1Q12796 327 aaPredicted RBP5.72□□□□□ -1.49
NOTCH3-202ENST00000595045 ORMDL2Q53FV1 153 aa5.72□□□□□ -1.49
NOTCH3-202ENST00000595045 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
NOTCH3-202ENST00000595045 CTDSP1Q9GZU7 261 aa5.72□□□□□ -1.49
NOTCH3-202ENST00000595045 XAGE1AQ9HD64 81 aa5.72□□□□□ -1.49
NOTCH3-202ENST00000595045 A0A087X002 238 aa5.71□□□□□ -1.5
NOTCH3-202ENST00000595045 IGIPA6NJ69 53 aa5.71□□□□□ -1.5
NOTCH3-202ENST00000595045 ZNF861PO60384 105 aa5.71□□□□□ -1.5
NOTCH3-202ENST00000595045 SNRPEP62304 92 aaKnown RBP5.71□□□□□ -1.5
NOTCH3-202ENST00000595045 FABP9Q0Z7S8 132 aa5.71□□□□□ -1.5
NOTCH3-202ENST00000595045 LINC01561Q8N1V8 128 aa5.71□□□□□ -1.5
NOTCH3-202ENST00000595045 CDKN2A-AS1Q9UH64 79 aa5.71□□□□□ -1.5
NOTCH3-202ENST00000595045 S100A2P29034 98 aa5.7□□□□□ -1.5
NOTCH3-202ENST00000595045 GEMIN7Q9H840 131 aaKnown RBP5.7□□□□□ -1.5
NOTCH3-202ENST00000595045 C22orf24Q9Y442 160 aa5.7□□□□□ -1.5
NOTCH3-202ENST00000595045 TSTD3H0UI37 97 aa5.69□□□□□ -1.5
NOTCH3-202ENST00000595045 HERVK_113P63121 156 aa5.69□□□□□ -1.5
NOTCH3-202ENST00000595045 Q8IZM0 81 aa5.69□□□□□ -1.5
NOTCH3-202ENST00000595045 NXT2Q9NPJ8 142 aaKnown RBP5.69□□□□□ -1.5
NOTCH3-202ENST00000595045 FAM19A3Q7Z5A8 133 aa5.68□□□□□ -1.5
NOTCH3-202ENST00000595045 TOMM6Q96B49 74 aa5.68□□□□□ -1.5
NOTCH3-202ENST00000595045 YPEL4Q96NS1 127 aa5.68□□□□□ -1.5
NOTCH3-202ENST00000595045 SCGB3A1Q96QR1 104 aa5.68□□□□□ -1.5
NOTCH3-202ENST00000595045 RPS10P5Q9NQ39 176 aa5.68□□□□□ -1.5
NOTCH3-202ENST00000595045 K7EMI3 77 aa5.67□□□□□ -1.5
NOTCH3-202ENST00000595045 NPSP0C0P6 89 aa5.67□□□□□ -1.5
NOTCH3-202ENST00000595045 SEC11AP67812 179 aa5.67□□□□□ -1.5
NOTCH3-202ENST00000595045 PAPPA-AS1Q5QFB9 102 aa5.67□□□□□ -1.5
NOTCH3-202ENST00000595045 TIMM17AQ99595 171 aa5.67□□□□□ -1.5
NOTCH3-202ENST00000595045 RPL37AP8A6NKH3 93 aa5.66□□□□□ -1.5
NOTCH3-202ENST00000595045 F8VRH5 84 aa5.66□□□□□ -1.5
NOTCH3-202ENST00000595045 G0S2P27469 103 aa5.66□□□□□ -1.5
NOTCH3-202ENST00000595045 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
NOTCH3-202ENST00000595045 ANAPC11Q9NYG5 84 aa5.66□□□□□ -1.5
NOTCH3-202ENST00000595045 GAGE10A6NGK3 116 aa5.65□□□□□ -1.5
NOTCH3-202ENST00000595045 SMIM1B2RUZ4 78 aa5.65□□□□□ -1.5
NOTCH3-202ENST00000595045 SPINK8P0C7L1 97 aa5.65□□□□□ -1.5
NOTCH3-202ENST00000595045 ERASQ7Z444 233 aa5.65□□□□□ -1.5
NOTCH3-202ENST00000595045 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.5
NOTCH3-202ENST00000595045 COX7B2Q8TF08 81 aa5.65□□□□□ -1.5
NOTCH3-202ENST00000595045 CDIP1Q9H305 208 aa5.65□□□□□ -1.5
NOTCH3-202ENST00000595045 NUPR1O60356 82 aa5.64□□□□□ -1.51
NOTCH3-202ENST00000595045 COA6Q5JTJ3 125 aaKnown RBP5.64□□□□□ -1.51
NOTCH3-202ENST00000595045 MRPL55Q7Z7F7 128 aaKnown RBP5.64□□□□□ -1.51
NOTCH3-202ENST00000595045 LINC00167Q96N53 147 aa5.64□□□□□ -1.51
NOTCH3-202ENST00000595045 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
NOTCH3-202ENST00000595045 TINCRA0A1B0GVN0 87 aa5.63□□□□□ -1.51
NOTCH3-202ENST00000595045 DDTP30046 118 aa5.63□□□□□ -1.51
NOTCH3-202ENST00000595045 CXCL5P42830 114 aa5.63□□□□□ -1.51
NOTCH3-202ENST00000595045 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
NOTCH3-202ENST00000595045 PDZD11Q5EBL8 140 aa5.63□□□□□ -1.51
NOTCH3-202ENST00000595045 PYY3Q5JQD4 70 aa5.63□□□□□ -1.51
NOTCH3-202ENST00000595045 CST9LQ9H4G1 147 aa5.63□□□□□ -1.51
NOTCH3-202ENST00000595045 BCE1O60756 84 aa5.62□□□□□ -1.51
NOTCH3-202ENST00000595045 NDUFA6P56556 154 aa5.62□□□□□ -1.51
NOTCH3-202ENST00000595045 FA2HQ7L5A8 372 aa5.62□□□□□ -1.51
NOTCH3-202ENST00000595045 HIST3H2BBQ8N257 126 aa5.62□□□□□ -1.51
NOTCH3-202ENST00000595045 C14orf144Q96I85 54 aa5.62□□□□□ -1.51
NOTCH3-202ENST00000595045 GNB1LQ9BYB4 327 aa5.62□□□□□ -1.51
NOTCH3-202ENST00000595045 TP73-AS1Q9UF72 201 aa5.62□□□□□ -1.51
NOTCH3-202ENST00000595045 TRAV9-1A0A075B6T8 112 aa5.61□□□□□ -1.51
NOTCH3-202ENST00000595045 CRYGAP11844 174 aa5.61□□□□□ -1.51
NOTCH3-202ENST00000595045 PFN2P35080 140 aa5.61□□□□□ -1.51
NOTCH3-202ENST00000595045 RPL28P46779 137 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms