RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 RETNQ9HD89 108 aa3.12□□□□□ -1.91
LRIT3-202ENST00000594814 CLPSL1A2RUU4 121 aa3.12□□□□□ -1.91
LRIT3-202ENST00000594814 RPL39P62891 51 aaKnown RBP3.12□□□□□ -1.91
LRIT3-202ENST00000594814 UBE2BP63146 152 aa3.12□□□□□ -1.91
LRIT3-202ENST00000594814 WNK2Q9Y3S1 2297 aa3.12□□□□□ -1.91
LRIT3-202ENST00000594814 MYO9AB2RTY4 2548 aa3.12□□□□□ -1.91
LRIT3-202ENST00000594814 IGHV4-30-2A0A087WSY4 118 aa3.12□□□□□ -1.91
LRIT3-202ENST00000594814 A0A096LNT2 108 aa3.12□□□□□ -1.91
LRIT3-202ENST00000594814 IGHV4-38-2P0DP08 117 aa3.12□□□□□ -1.91
LRIT3-202ENST00000594814 TEP1Q99973 2627 aaKnown RBP3.11□□□□□ -1.91
LRIT3-202ENST00000594814 CSPG4Q6UVK1 2322 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 IGHV3-16A0A0C4DH30 117 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 IGHV4-61A0A0C4DH41 118 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 IGKV3D-7A0A0C4DH55 119 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 USMG5Q96IX5 58 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 DNAH3Q8TD57 4116 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 SONP18583 2426 aaKnown RBP3.11□□□□□ -1.91
LRIT3-202ENST00000594814 F8WEM9 126 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 LMO4P61968 165 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 NOTCH2NLQ7Z3S9 236 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 CYP4F30PQ9H0H9 118 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 S4R3C0 116 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 BAHCC1Q9P281 2608 aa3.11□□□□□ -1.91
LRIT3-202ENST00000594814 LCE6AA0A183 80 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 F5H697 171 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 C6orf223Q8N319 242 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 SMR3AQ99954 134 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 C14orf132Q9NPU4 83 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 SAA4P35542 130 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 PRR3P79522 188 aaKnown RBP3.1□□□□□ -1.91
LRIT3-202ENST00000594814 MTORP42345 2549 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 NDUFB1O75438 58 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 FUSP35637 526 aaKnown RBP eCLIP3.1□□□□□ -1.91
LRIT3-202ENST00000594814 ELOF1P60002 83 aaKnown RBP3.1□□□□□ -1.91
LRIT3-202ENST00000594814 DAD1P61803 113 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 SNRPD3P62318 126 aaKnown RBP3.1□□□□□ -1.91
LRIT3-202ENST00000594814 ECSCRQ19T08 205 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 ASB16-AS1Q495Z4 193 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 OPRPNQ99935 248 aaPredicted RBP3.1□□□□□ -1.91
LRIT3-202ENST00000594814 RBM12B-AS1Q9P1G2 102 aa3.1□□□□□ -1.91
LRIT3-202ENST00000594814 TRBV10-1A0A0K0K1A3 114 aa3.09□□□□□ -1.91
LRIT3-202ENST00000594814 A8MTW9 85 aa3.09□□□□□ -1.91
LRIT3-202ENST00000594814 PRR9Q5T870 116 aa3.09□□□□□ -1.91
LRIT3-202ENST00000594814 WFDC11Q8NEX6 87 aa3.09□□□□□ -1.91
LRIT3-202ENST00000594814 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.91
LRIT3-202ENST00000594814 NSD1Q96L73 2696 aaPredicted RBP3.09□□□□□ -1.91
LRIT3-202ENST00000594814 FAM218AQ96MZ4 157 aa3.09□□□□□ -1.91
LRIT3-202ENST00000594814 CHCHD7Q9BUK0 85 aa3.09□□□□□ -1.91
LRIT3-202ENST00000594814 SETD2Q9BYW2 2564 aaPredicted RBP3.09□□□□□ -1.92
LRIT3-202ENST00000594814 TRAV23DV6A0A075B6W5 121 aa3.09□□□□□ -1.92
LRIT3-202ENST00000594814 IGHV1OR15-1A0A075B7D0 117 aa3.09□□□□□ -1.92
LRIT3-202ENST00000594814 IGHV3OR16-8A0A075B7F1 116 aa3.09□□□□□ -1.92
LRIT3-202ENST00000594814 COX17Q14061 63 aa3.09□□□□□ -1.92
LRIT3-202ENST00000594814 PHF5AQ7RTV0 110 aaKnown RBP3.09□□□□□ -1.92
LRIT3-202ENST00000594814 FAM104AQ969W3 186 aa3.09□□□□□ -1.92
LRIT3-202ENST00000594814 CR1P17927 2039 aa3.09□□□□□ -1.92
LRIT3-202ENST00000594814 SMIM1B2RUZ4 78 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 UBE2L6O14933 153 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 ENHOQ6UWT2 76 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 Q6ZQT0 140 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 SND1-IT1Q9HBX3 110 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 DNHD1Q96M86 4753 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 IGHV3-35A0A0C4DH35 117 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 TRBV6-4A0A1B0GX49 114 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 J3QKU1 62 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 UBE2AP49459 152 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 Q6ZVQ6 151 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 MIR7-3HGQ8N6C7 128 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 SMIM11BQ8TCY0 68 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 DEFB104AQ8WTQ1 72 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 CCL19Q99731 98 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 MAST4O15021 2626 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 A0A087WVE0 104 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 hDV103S1A0JD37 113 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 K7EQD1 137 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 IGHV4-31P0DP07 118 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 LINC01547P58512 204 aaPredicted RBP3.08□□□□□ -1.92
LRIT3-202ENST00000594814 NREPQ16612 68 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 Q8N814 137 aa3.08□□□□□ -1.92
LRIT3-202ENST00000594814 IGHV7-81A0A0B4J1V7 117 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 TRAV12-3A0A0B4J271 114 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 IGHV3-53P01767 116 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 COX7A1P24310 79 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 ATP11AUNQ6ZP68 121 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 LIMD2Q9BT23 127 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 CSMD3Q7Z407 3707 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 LOC100131303A0A0U1RQF7 123 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 IGKV2-29A2NJV5 120 aaPredicted RBP3.07□□□□□ -1.92
LRIT3-202ENST00000594814 IGHV3-23P01764 117 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 APOC4P55056 127 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 KRTAP1-1Q07627 177 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 SOSTDC1Q6X4U4 206 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 BRD3OSQ6XYD6 125 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 H3BPC8 53 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 PAX4O43316 350 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 Q6ZTC4 211 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 CDKN2A-AS1Q9UH64 79 aa3.07□□□□□ -1.92
LRIT3-202ENST00000594814 SS18Q15532 418 aa3.06□□□□□ -1.92
LRIT3-202ENST00000594814 A0A087WYN8 130 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms