RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 CDKN2A-AS1Q9UH64 79 aa12.53□□□□□ -0.4
COPE-204ENST00000593827 A0A1W2PNN7 141 aa12.52□□□□□ -0.41
COPE-204ENST00000593827 NDUFC2-KCTD14E9PQ53 114 aa12.52□□□□□ -0.41
COPE-204ENST00000593827 C2orf82Q6UX34 121 aa12.52□□□□□ -0.41
COPE-204ENST00000593827 GAGE2EQ4V326 116 aa12.51□□□□□ -0.41
COPE-204ENST00000593827 C18orf32Q8TCD1 76 aa12.51□□□□□ -0.41
COPE-204ENST00000593827 GAGE2DQ9UEU5 116 aa12.51□□□□□ -0.41
COPE-204ENST00000593827 F8VRH5 84 aa12.49□□□□□ -0.41
COPE-204ENST00000593827 H3BRM9 83 aa12.49□□□□□ -0.41
COPE-204ENST00000593827 HBDP02042 147 aa12.49□□□□□ -0.41
COPE-204ENST00000593827 PDZD11Q5EBL8 140 aa12.49□□□□□ -0.41
COPE-204ENST00000593827 SPINK6Q6UWN8 80 aa12.49□□□□□ -0.41
COPE-204ENST00000593827 IGLV5-45A0A087WSX0 123 aa12.48□□□□□ -0.41
COPE-204ENST00000593827 ATP5LO75964 103 aa12.47□□□□□ -0.41
COPE-204ENST00000593827 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
COPE-204ENST00000593827 PKHD1L1Q86WI1 4243 aa12.47□□□□□ -0.41
COPE-204ENST00000593827 NDUFA6P56556 154 aa12.46□□□□□ -0.41
COPE-204ENST00000593827 REG3GQ6UW15 175 aa12.46□□□□□ -0.41
COPE-204ENST00000593827 SMIM1B2RUZ4 78 aa12.45□□□□□ -0.42
COPE-204ENST00000593827 PHF5AQ7RTV0 110 aaKnown RBP12.44□□□□□ -0.42
COPE-204ENST00000593827 FAM19A5Q7Z5A7 132 aaPredicted RBP12.44□□□□□ -0.42
COPE-204ENST00000593827 COX7B2Q8TF08 81 aa12.44□□□□□ -0.42
COPE-204ENST00000593827 LRP1Q07954 4544 aaKnown RBP12.42□□□□□ -0.42
COPE-204ENST00000593827 CHCHD1Q96BP2 118 aaKnown RBP12.42□□□□□ -0.42
COPE-204ENST00000593827 PSORS1C2Q9UIG4 136 aa12.42□□□□□ -0.42
COPE-204ENST00000593827 A0A096LNJ9 63 aa12.41□□□□□ -0.42
COPE-204ENST00000593827 M0QXV9 152 aa12.41□□□□□ -0.42
COPE-204ENST00000593827 IGLC3P0DOY3 106 aa12.41□□□□□ -0.42
COPE-204ENST00000593827 URB1-AS1Q96HZ7 61 aa12.41□□□□□ -0.42
COPE-204ENST00000593827 YPEL4Q96NS1 127 aa12.41□□□□□ -0.42
COPE-204ENST00000593827 FAT3Q8TDW7 4589 aa12.4□□□□□ -0.42
COPE-204ENST00000593827 FAM168BA1KXE4 195 aa12.4□□□□□ -0.42
COPE-204ENST00000593827 SPINK8P0C7L1 97 aa12.4□□□□□ -0.42
COPE-204ENST00000593827 UBE2BP63146 152 aa12.4□□□□□ -0.42
COPE-204ENST00000593827 C1orf137Q5JT78 98 aa12.4□□□□□ -0.42
COPE-204ENST00000593827 SRSF9Q13242 221 aaKnown RBP eCLIP12.39□□□□□ -0.43
COPE-204ENST00000593827 PMCHL1Q16048 86 aa12.39□□□□□ -0.43
COPE-204ENST00000593827 ODF1Q14990 250 aa12.38□□□□□ -0.43
COPE-204ENST00000593827 C9orf129Q5T035 196 aaKnown RBP12.38□□□□□ -0.43
COPE-204ENST00000593827 BAGE3Q86Y29 109 aa12.38□□□□□ -0.43
COPE-204ENST00000593827 LBHQ53QV2 105 aaPredicted RBP12.37□□□□□ -0.43
COPE-204ENST00000593827 CBLN2Q8IUK8 224 aa12.37□□□□□ -0.43
COPE-204ENST00000593827 LINC01600Q96MT4 127 aa12.37□□□□□ -0.43
COPE-204ENST00000593827 SFTA2Q6UW10 78 aa12.36□□□□□ -0.43
COPE-204ENST00000593827 HSBP1O75506 76 aa12.34□□□□□ -0.43
COPE-204ENST00000593827 ZNF22P17026 224 aaPredicted RBP12.34□□□□□ -0.43
COPE-204ENST00000593827 DIRC1Q969H9 104 aa12.34□□□□□ -0.43
COPE-204ENST00000593827 XAGE1AQ9HD64 81 aa12.34□□□□□ -0.43
COPE-204ENST00000593827 IGLV5-39A0A0G2JS06 123 aa12.33□□□□□ -0.44
COPE-204ENST00000593827 IGLV7-43P04211 117 aa12.33□□□□□ -0.44
COPE-204ENST00000593827 MT1HL1P0DM35 61 aa12.33□□□□□ -0.44
COPE-204ENST00000593827 TMEM170BQ5T4T1 132 aa12.33□□□□□ -0.44
COPE-204ENST00000593827 TP73-AS1Q9UF72 201 aa12.33□□□□□ -0.44
COPE-204ENST00000593827 IFI27L1Q96BM0 104 aa12.32□□□□□ -0.44
COPE-204ENST00000593827 CHTOPQ9Y3Y2 248 aaKnown RBP12.32□□□□□ -0.44
COPE-204ENST00000593827 TRAV12-1A0A0B4J245 112 aa12.31□□□□□ -0.44
COPE-204ENST00000593827 KRTAP7-1Q8IUC3 87 aa12.31□□□□□ -0.44
COPE-204ENST00000593827 SLC7A5P1Q8MH63 180 aa12.31□□□□□ -0.44
COPE-204ENST00000593827 C22orf24Q9Y442 160 aa12.31□□□□□ -0.44
COPE-204ENST00000593827 TRGC2P03986 189 aa12.3□□□□□ -0.44
COPE-204ENST00000593827 UBR4Q5T4S7 5183 aa12.29□□□□□ -0.44
COPE-204ENST00000593827 C11orf86A6NJI1 115 aa12.29□□□□□ -0.44
COPE-204ENST00000593827 NUPR1O60356 82 aa12.29□□□□□ -0.44
COPE-204ENST00000593827 COX17Q14061 63 aa12.28□□□□□ -0.44
COPE-204ENST00000593827 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
COPE-204ENST00000593827 PLA2G2DQ9UNK4 145 aa12.28□□□□□ -0.44
COPE-204ENST00000593827 HMCN2Q8NDA2 5059 aa12.27□□□□□ -0.45
COPE-204ENST00000593827 NKAPP1Q8N9T2 125 aa12.25□□□□□ -0.45
COPE-204ENST00000593827 H0Y9J4 135 aa12.24□□□□□ -0.45
COPE-204ENST00000593827 PFN2P35080 140 aa12.24□□□□□ -0.45
COPE-204ENST00000593827 KRTAP11-1Q8IUC1 163 aa12.24□□□□□ -0.45
COPE-204ENST00000593827 ERG28Q9UKR5 140 aa12.24□□□□□ -0.45
COPE-204ENST00000593827 LEPROTL1O95214 131 aa12.23□□□□□ -0.45
COPE-204ENST00000593827 FAM19A2Q8N3H0 131 aa12.23□□□□□ -0.45
COPE-204ENST00000593827 IGLV5-37A0A075B6J1 123 aa12.22□□□□□ -0.45
COPE-204ENST00000593827 KRTAP10-8P60410 259 aa12.22□□□□□ -0.45
COPE-204ENST00000593827 HSPB8Q9UJY1 196 aa12.22□□□□□ -0.45
COPE-204ENST00000593827 TMEM223A0PJW6 202 aa12.2□□□□□ -0.46
COPE-204ENST00000593827 COLCA2A8K830 154 aa12.2□□□□□ -0.46
COPE-204ENST00000593827 SERF1AO75920 110 aa12.2□□□□□ -0.46
COPE-204ENST00000593827 RPL24P83731 157 aaKnown RBP12.2□□□□□ -0.46
COPE-204ENST00000593827 ZNF861PO60384 105 aa12.19□□□□□ -0.46
COPE-204ENST00000593827 LINC00587B1AMM8 73 aa12.18□□□□□ -0.46
COPE-204ENST00000593827 RPL28P46779 137 aaKnown RBP12.18□□□□□ -0.46
COPE-204ENST00000593827 ZNF625Q96I27 306 aaPredicted RBP12.18□□□□□ -0.46
COPE-204ENST00000593827 LINC00167Q96N53 147 aa12.18□□□□□ -0.46
COPE-204ENST00000593827 SND1-IT1Q9HBX3 110 aa12.18□□□□□ -0.46
COPE-204ENST00000593827 H0Y8G0 127 aa12.17□□□□□ -0.46
COPE-204ENST00000593827 BCE1O60756 84 aa12.17□□□□□ -0.46
COPE-204ENST00000593827 PLNP26678 52 aa12.17□□□□□ -0.46
COPE-204ENST00000593827 IGLV1-50A0A075B6I6 118 aa12.16□□□□□ -0.46
COPE-204ENST00000593827 ATP6V1G1O75348 118 aa12.16□□□□□ -0.46
COPE-204ENST00000593827 LINC00158P58513 81 aa12.16□□□□□ -0.46
COPE-204ENST00000593827 HERV-K104P63124 156 aa12.16□□□□□ -0.46
COPE-204ENST00000593827 RPL37AP8A6NKH3 93 aa12.15□□□□□ -0.46
COPE-204ENST00000593827 TNXBP22105 4242 aa12.14□□□□□ -0.47
COPE-204ENST00000593827 GAGE10A6NGK3 116 aa12.14□□□□□ -0.47
COPE-204ENST00000593827 RPL13AP40429 203 aaKnown RBP12.13□□□□□ -0.47
COPE-204ENST00000593827 HERVK_113P61574 105 aa12.13□□□□□ -0.47
COPE-204ENST00000593827 FABP4P15090 132 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms