RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 WIPF1O43516 503 aa11.43□□□□□ -0.58
PRKCSH-217ENST00000592741 SPART-AS1P0CW21 52 aa11.43□□□□□ -0.58
PRKCSH-217ENST00000592741 CCL18P55774 89 aa11.43□□□□□ -0.58
PRKCSH-217ENST00000592741 LINC00269Q8N2A0 174 aa11.43□□□□□ -0.58
PRKCSH-217ENST00000592741 NSD1Q96L73 2696 aaPredicted RBP11.43□□□□□ -0.58
PRKCSH-217ENST00000592741 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
PRKCSH-217ENST00000592741 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
PRKCSH-217ENST00000592741 LINC00337Q8N6G1 96 aa11.42□□□□□ -0.58
PRKCSH-217ENST00000592741 TRACP01848 142 aa11.42□□□□□ -0.58
PRKCSH-217ENST00000592741 IGHV4-30-4P0DP06 118 aa11.42□□□□□ -0.58
PRKCSH-217ENST00000592741 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
PRKCSH-217ENST00000592741 VWFP04275 2813 aa11.41□□□□□ -0.58
PRKCSH-217ENST00000592741 ANGP03950 147 aaKnown RBP11.41□□□□□ -0.58
PRKCSH-217ENST00000592741 CD164L2Q6UWJ8 174 aa11.41□□□□□ -0.58
PRKCSH-217ENST00000592741 MRPL23Q16540 153 aaKnown RBP11.4□□□□□ -0.58
PRKCSH-217ENST00000592741 HTN3P15516 51 aa11.39□□□□□ -0.59
PRKCSH-217ENST00000592741 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-217ENST00000592741 NOTCH2Q04721 2471 aa11.39□□□□□ -0.59
PRKCSH-217ENST00000592741 REG3AQ06141 175 aa11.39□□□□□ -0.59
PRKCSH-217ENST00000592741 CKS1BP61024 79 aa11.38□□□□□ -0.59
PRKCSH-217ENST00000592741 DEFB121Q5J5C9 76 aa11.38□□□□□ -0.59
PRKCSH-217ENST00000592741 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
PRKCSH-217ENST00000592741 CXCL5P42830 114 aa11.37□□□□□ -0.59
PRKCSH-217ENST00000592741 Q8N3U1 123 aa11.37□□□□□ -0.59
PRKCSH-217ENST00000592741 FAM218AQ96MZ4 157 aa11.37□□□□□ -0.59
PRKCSH-217ENST00000592741 MALP21145 153 aa11.36□□□□□ -0.59
PRKCSH-217ENST00000592741 LELP1Q5T871 98 aa11.36□□□□□ -0.59
PRKCSH-217ENST00000592741 SMIM11BQ8TCY0 68 aa11.36□□□□□ -0.59
PRKCSH-217ENST00000592741 IGLV10-54A0A075B6I4 117 aa11.36□□□□□ -0.59
PRKCSH-217ENST00000592741 NBEAL2Q6ZNJ1 2754 aa11.36□□□□□ -0.59
PRKCSH-217ENST00000592741 KIAA0087Q14695 138 aa11.35□□□□□ -0.59
PRKCSH-217ENST00000592741 BAALC-AS2P0C853 105 aa11.34□□□□□ -0.59
PRKCSH-217ENST00000592741 FAM240AA0A1B0GVK7 77 aa11.33□□□□□ -0.6
PRKCSH-217ENST00000592741 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.6
PRKCSH-217ENST00000592741 TENM1Q9UKZ4 2725 aa11.33□□□□□ -0.6
PRKCSH-217ENST00000592741 H0YGX0 51 aa11.33□□□□□ -0.6
PRKCSH-217ENST00000592741 HIVEP1P15822 2718 aa11.33□□□□□ -0.6
PRKCSH-217ENST00000592741 SNCGO76070 127 aa11.32□□□□□ -0.6
PRKCSH-217ENST00000592741 COX17Q14061 63 aa11.32□□□□□ -0.6
PRKCSH-217ENST00000592741 A0A1B0GV72 72 aa11.31□□□□□ -0.6
PRKCSH-217ENST00000592741 DNAL4O96015 105 aa11.3□□□□□ -0.6
PRKCSH-217ENST00000592741 Q9HAA7 133 aa11.3□□□□□ -0.6
PRKCSH-217ENST00000592741 TEP1Q99973 2627 aaKnown RBP11.29□□□□□ -0.6
PRKCSH-217ENST00000592741 OXLD1Q5BKU9 147 aa11.29□□□□□ -0.6
PRKCSH-217ENST00000592741 C15orf53Q8NAA6 179 aa11.29□□□□□ -0.6
PRKCSH-217ENST00000592741 A0A087WYN8 130 aa11.28□□□□□ -0.6
PRKCSH-217ENST00000592741 KLK5Q9Y337 293 aaPredicted RBP11.28□□□□□ -0.6
PRKCSH-217ENST00000592741 NDUFC2O95298 119 aa11.27□□□□□ -0.6
PRKCSH-217ENST00000592741 PRR34Q9NV39 138 aa11.27□□□□□ -0.6
PRKCSH-217ENST00000592741 KLK12Q9UKR0 248 aa11.27□□□□□ -0.6
PRKCSH-217ENST00000592741 ACYP1P07311 99 aa11.27□□□□□ -0.61
PRKCSH-217ENST00000592741 KRTAP10-11P60412 298 aa11.27□□□□□ -0.61
PRKCSH-217ENST00000592741 LYPD5Q6UWN5 251 aa11.27□□□□□ -0.61
PRKCSH-217ENST00000592741 ATRQ13535 2644 aa11.27□□□□□ -0.61
PRKCSH-217ENST00000592741 SPAG11BQ08648 103 aa11.26□□□□□ -0.61
PRKCSH-217ENST00000592741 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
PRKCSH-217ENST00000592741 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
PRKCSH-217ENST00000592741 GAGE2EQ4V326 116 aa11.26□□□□□ -0.61
PRKCSH-217ENST00000592741 RETNQ9HD89 108 aa11.26□□□□□ -0.61
PRKCSH-217ENST00000592741 GAGE2DQ9UEU5 116 aa11.26□□□□□ -0.61
PRKCSH-217ENST00000592741 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
PRKCSH-217ENST00000592741 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
PRKCSH-217ENST00000592741 H3BNG1 76 aa11.23□□□□□ -0.61
PRKCSH-217ENST00000592741 LECT2O14960 151 aa11.23□□□□□ -0.61
PRKCSH-217ENST00000592741 TTC32Q5I0X7 151 aa11.23□□□□□ -0.61
PRKCSH-217ENST00000592741 Q6Q795 121 aa11.23□□□□□ -0.61
PRKCSH-217ENST00000592741 ENHOQ6UWT2 76 aa11.23□□□□□ -0.61
PRKCSH-217ENST00000592741 MUC7Q8TAX7 377 aa11.23□□□□□ -0.61
PRKCSH-217ENST00000592741 TRRAPQ9Y4A5 3859 aa11.23□□□□□ -0.61
PRKCSH-217ENST00000592741 EGFEM1PQ0D2K5 195 aa11.22□□□□□ -0.61
PRKCSH-217ENST00000592741 PRR3P79522 188 aaKnown RBP11.21□□□□□ -0.61
PRKCSH-217ENST00000592741 KRTAP24-1Q3LI83 254 aa11.21□□□□□ -0.61
PRKCSH-217ENST00000592741 KPRPQ5T749 579 aaPredicted RBP11.21□□□□□ -0.61
PRKCSH-217ENST00000592741 UNQ6190/PRO20217Q6UXQ8 127 aa11.21□□□□□ -0.61
PRKCSH-217ENST00000592741 C6orf223Q8N319 242 aa11.21□□□□□ -0.61
PRKCSH-217ENST00000592741 TMEM126AQ9H061 195 aa11.21□□□□□ -0.61
PRKCSH-217ENST00000592741 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
PRKCSH-217ENST00000592741 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
PRKCSH-217ENST00000592741 A0A0J9YWU9 116 aa11.2□□□□□ -0.62
PRKCSH-217ENST00000592741 CYSRT1A8MQ03 144 aa11.2□□□□□ -0.62
PRKCSH-217ENST00000592741 Q6ZTC4 211 aa11.19□□□□□ -0.62
PRKCSH-217ENST00000592741 C3orf56Q8N813 242 aa11.19□□□□□ -0.62
PRKCSH-217ENST00000592741 NCR3O14931 201 aa11.18□□□□□ -0.62
PRKCSH-217ENST00000592741 A0A1B0GX51 115 aa11.18□□□□□ -0.62
PRKCSH-217ENST00000592741 LINC00526Q96FQ7 95 aa11.18□□□□□ -0.62
PRKCSH-217ENST00000592741 ANAPC13Q9BS18 74 aa11.18□□□□□ -0.62
PRKCSH-217ENST00000592741 WFDC10BQ8IUB3 73 aa11.17□□□□□ -0.62
PRKCSH-217ENST00000592741 ORMDL1Q9P0S3 153 aa11.17□□□□□ -0.62
PRKCSH-217ENST00000592741 GVQW2A0A096LPI5 108 aaPredicted RBP11.16□□□□□ -0.62
PRKCSH-217ENST00000592741 S100A7L2Q5SY68 101 aa11.16□□□□□ -0.62
PRKCSH-217ENST00000592741 GAGE2AQ6NT46 116 aa11.16□□□□□ -0.62
PRKCSH-217ENST00000592741 SLPIP03973 132 aa11.15□□□□□ -0.62
PRKCSH-217ENST00000592741 Q8NDZ9 215 aa11.15□□□□□ -0.62
PRKCSH-217ENST00000592741 OBSCN-AS1Q96MR7 158 aa11.15□□□□□ -0.62
PRKCSH-217ENST00000592741 LINC00167Q96N53 147 aa11.15□□□□□ -0.62
PRKCSH-217ENST00000592741 NDUFV3P56181 108 aaKnown RBP11.14□□□□□ -0.63
PRKCSH-217ENST00000592741 TRBV7-7A0A0K0K1E9 115 aa11.14□□□□□ -0.63
PRKCSH-217ENST00000592741 Q8N814 137 aa11.14□□□□□ -0.63
PRKCSH-217ENST00000592741 LINC00643Q86TS7 51 aa11.13□□□□□ -0.63
PRKCSH-217ENST00000592741 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms