RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 CCDC168Q8NDH2 2452 aa8.02□□□□□ -1.13
ZNF540-210ENST00000592533 ATP5G1P05496 136 aa8.02□□□□□ -1.13
ZNF540-210ENST00000592533 DEFB130BP0DP73 79 aa8.02□□□□□ -1.13
ZNF540-210ENST00000592533 DEFB130AP0DP74 79 aa8.02□□□□□ -1.13
ZNF540-210ENST00000592533 C6orf226Q5I0X4 101 aa8.02□□□□□ -1.13
ZNF540-210ENST00000592533 PFN2P35080 140 aa8.02□□□□□ -1.13
ZNF540-210ENST00000592533 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
ZNF540-210ENST00000592533 SS18L2Q9UHA2 77 aa8.02□□□□□ -1.13
ZNF540-210ENST00000592533 PAX4O43316 350 aa8.01□□□□□ -1.13
ZNF540-210ENST00000592533 A0A1B0GX51 115 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 LYRM9A8MSI8 78 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 KRTAP10-3P60369 221 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 COX17Q14061 63 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 SETD2Q9BYW2 2564 aaPredicted RBP8□□□□□ -1.13
ZNF540-210ENST00000592533 FAM236AA0A1B0GUQ0 79 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 FAM236BA0A1B0GV22 79 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 NDUFC2O95298 119 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 XCL1P47992 114 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 TENM4Q6N022 2769 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 GAGE2AQ6NT46 116 aa8□□□□□ -1.13
ZNF540-210ENST00000592533 KLK5Q9Y337 293 aaPredicted RBP8□□□□□ -1.13
ZNF540-210ENST00000592533 IGHV4-28A0A0C4DH34 117 aa7.99□□□□□ -1.13
ZNF540-210ENST00000592533 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
ZNF540-210ENST00000592533 LECT2O14960 151 aa7.99□□□□□ -1.13
ZNF540-210ENST00000592533 C9orf129Q5T035 196 aaKnown RBP7.98□□□□□ -1.13
ZNF540-210ENST00000592533 CD164L2Q6UWJ8 174 aa7.98□□□□□ -1.13
ZNF540-210ENST00000592533 HIST1H4AP62805 103 aaKnown RBP7.98□□□□□ -1.13
ZNF540-210ENST00000592533 NANOS2P60321 138 aaKnown RBP7.98□□□□□ -1.13
ZNF540-210ENST00000592533 ACANP16112 2415 aa7.96□□□□□ -1.13
ZNF540-210ENST00000592533 OR13C6PQ8NH95 151 aa7.96□□□□□ -1.13
ZNF540-210ENST00000592533 ORMDL1Q9P0S3 153 aa7.96□□□□□ -1.13
ZNF540-210ENST00000592533 C14orf132Q9NPU4 83 aa7.96□□□□□ -1.14
ZNF540-210ENST00000592533 MTORP42345 2549 aa7.96□□□□□ -1.14
ZNF540-210ENST00000592533 C11orf68Q9H3H3 251 aaKnown RBP7.96□□□□□ -1.14
ZNF540-210ENST00000592533 Q6JHZ5 121 aa7.95□□□□□ -1.14
ZNF540-210ENST00000592533 MUC7Q8TAX7 377 aa7.95□□□□□ -1.14
ZNF540-210ENST00000592533 LINC00269Q8N2A0 174 aa7.94□□□□□ -1.14
ZNF540-210ENST00000592533 CHCHD10Q8WYQ3 142 aaPredicted RBP7.94□□□□□ -1.14
ZNF540-210ENST00000592533 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
ZNF540-210ENST00000592533 CLPSL2Q6UWE3 100 aa7.94□□□□□ -1.14
ZNF540-210ENST00000592533 C9orf66Q5T8R8 295 aa7.93□□□□□ -1.14
ZNF540-210ENST00000592533 CFAP161Q6P656 301 aa7.93□□□□□ -1.14
ZNF540-210ENST00000592533 C3orf22Q8N5N4 141 aa7.93□□□□□ -1.14
ZNF540-210ENST00000592533 Q8N814 137 aa7.93□□□□□ -1.14
ZNF540-210ENST00000592533 SVIPQ8NHG7 77 aa7.93□□□□□ -1.14
ZNF540-210ENST00000592533 UQCRQO14949 82 aa7.93□□□□□ -1.14
ZNF540-210ENST00000592533 REG3AQ06141 175 aa7.93□□□□□ -1.14
ZNF540-210ENST00000592533 LINC00846Q9NV44 126 aa7.93□□□□□ -1.14
ZNF540-210ENST00000592533 GCN1Q92616 2671 aaKnown RBP7.92□□□□□ -1.14
ZNF540-210ENST00000592533 NCR3O14931 201 aa7.92□□□□□ -1.14
ZNF540-210ENST00000592533 JMJD7-PLA2G4BH0Y9G9 81 aa7.92□□□□□ -1.14
ZNF540-210ENST00000592533 FN1P02751 2386 aaKnown RBP7.92□□□□□ -1.14
ZNF540-210ENST00000592533 A0A096LPF7 62 aa7.92□□□□□ -1.14
ZNF540-210ENST00000592533 SLPIP03973 132 aa7.92□□□□□ -1.14
ZNF540-210ENST00000592533 CCKP06307 115 aa7.92□□□□□ -1.14
ZNF540-210ENST00000592533 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
ZNF540-210ENST00000592533 ITPR2Q14571 2701 aa7.91□□□□□ -1.14
ZNF540-210ENST00000592533 APOC4P55056 127 aa7.91□□□□□ -1.14
ZNF540-210ENST00000592533 TMEM256-PLSCR3K7ERE1 68 aa7.91□□□□□ -1.14
ZNF540-210ENST00000592533 ATOX1O00244 68 aa7.91□□□□□ -1.14
ZNF540-210ENST00000592533 ANGP03950 147 aaKnown RBP7.9□□□□□ -1.14
ZNF540-210ENST00000592533 C2orf48Q96LS8 159 aa7.9□□□□□ -1.14
ZNF540-210ENST00000592533 PRR3P79522 188 aaKnown RBP7.89□□□□□ -1.15
ZNF540-210ENST00000592533 Q8NAQ8 132 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 A0A0J9YWU9 116 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 IGHV4-30-4P0DP06 118 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 MIFP14174 115 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 DAD1P61803 113 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 DEFB135Q30KP9 77 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 COX7CP15954 63 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 Q8N3U1 123 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 Q8NDZ9 215 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 PRR34Q9NV39 138 aa7.89□□□□□ -1.15
ZNF540-210ENST00000592533 LELP1Q5T871 98 aa7.88□□□□□ -1.15
ZNF540-210ENST00000592533 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
ZNF540-210ENST00000592533 RPL18AQ02543 176 aaKnown RBP7.88□□□□□ -1.15
ZNF540-210ENST00000592533 UNC79Q9P2D8 2635 aa7.87□□□□□ -1.15
ZNF540-210ENST00000592533 GVQW2A0A096LPI5 108 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-210ENST00000592533 C9orf116Q5BN46 136 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-210ENST00000592533 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
ZNF540-210ENST00000592533 C9orf153Q5TBE3 101 aa7.87□□□□□ -1.15
ZNF540-210ENST00000592533 ATP5EP2Q5VTU8 51 aa7.87□□□□□ -1.15
ZNF540-210ENST00000592533 IGLV10-54A0A075B6I4 117 aa7.87□□□□□ -1.15
ZNF540-210ENST00000592533 LINC00575Q6W349 94 aa7.87□□□□□ -1.15
ZNF540-210ENST00000592533 CELA1Q9UNI1 258 aa7.87□□□□□ -1.15
ZNF540-210ENST00000592533 CRYGAP11844 174 aa7.86□□□□□ -1.15
ZNF540-210ENST00000592533 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
ZNF540-210ENST00000592533 SMR3AQ99954 134 aa7.86□□□□□ -1.15
ZNF540-210ENST00000592533 IGLV6-57P01721 117 aa7.86□□□□□ -1.15
ZNF540-210ENST00000592533 HIVEP2P31629 2446 aa7.86□□□□□ -1.15
ZNF540-210ENST00000592533 J3QKU1 62 aa7.85□□□□□ -1.15
ZNF540-210ENST00000592533 DEFB4AO15263 64 aa7.85□□□□□ -1.15
ZNF540-210ENST00000592533 SPAG11BQ08648 103 aa7.85□□□□□ -1.15
ZNF540-210ENST00000592533 C6orf99Q4VX62 202 aa7.85□□□□□ -1.15
ZNF540-210ENST00000592533 VWFP04275 2813 aa7.85□□□□□ -1.15
ZNF540-210ENST00000592533 NBEAL2Q6ZNJ1 2754 aa7.85□□□□□ -1.15
ZNF540-210ENST00000592533 IGKV3D-7A0A0C4DH55 119 aa7.84□□□□□ -1.15
ZNF540-210ENST00000592533 SPART-AS1P0CW21 52 aa7.84□□□□□ -1.15
ZNF540-210ENST00000592533 C10orf25Q5T742 122 aa7.84□□□□□ -1.15
ZNF540-210ENST00000592533 WIPF1O43516 503 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms