RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 ATP6V0E1O15342 81 aa4.23□□□□□ -1.73
NPC1-213ENST00000591955 CD164Q04900 197 aa4.23□□□□□ -1.73
NPC1-213ENST00000591955 Q6ZRU5 148 aa4.23□□□□□ -1.73
NPC1-213ENST00000591955 FDCSPQ8NFU4 85 aa4.23□□□□□ -1.73
NPC1-213ENST00000591955 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
NPC1-213ENST00000591955 CDKN2A-AS1Q9UH64 79 aa4.23□□□□□ -1.73
NPC1-213ENST00000591955 FAM215AQ9Y5M1 114 aa4.23□□□□□ -1.73
NPC1-213ENST00000591955 ACANP16112 2415 aa4.23□□□□□ -1.73
NPC1-213ENST00000591955 ABCA1O95477 2261 aa4.23□□□□□ -1.73
NPC1-213ENST00000591955 TRAV23DV6A0A075B6W5 121 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 TMEM89A2RUT3 159 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 IGHV3-53P01767 116 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 IGF1P05019 195 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 MIFP14174 115 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 GYPEP15421 78 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 FAM27E3Q08E93 113 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 LINC00476Q8WZB0 136 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 FAM218AQ96MZ4 157 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 SMR3AQ99954 134 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 CHCHD7Q9BUK0 85 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 CYSTM1Q9H1C7 97 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 PKIGQ9Y2B9 76 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 ZGRF1Q86YA3 2104 aa4.22□□□□□ -1.73
NPC1-213ENST00000591955 PRRC2AP48634 2157 aaKnown RBP4.21□□□□□ -1.73
NPC1-213ENST00000591955 POLEQ07864 2286 aa4.21□□□□□ -1.73
NPC1-213ENST00000591955 FN1P02751 2386 aaKnown RBP4.21□□□□□ -1.73
NPC1-213ENST00000591955 PLXNB1O43157 2135 aa4.21□□□□□ -1.74
NPC1-213ENST00000591955 A0A087WVE0 104 aa4.21□□□□□ -1.74
NPC1-213ENST00000591955 IGHV3-66A0A0C4DH42 116 aa4.21□□□□□ -1.74
NPC1-213ENST00000591955 A0A0U1RQV1 116 aa4.21□□□□□ -1.74
NPC1-213ENST00000591955 LECT2O14960 151 aa4.21□□□□□ -1.74
NPC1-213ENST00000591955 ESRGQ1W209 222 aa4.21□□□□□ -1.74
NPC1-213ENST00000591955 SMIM11BQ8TCY0 68 aa4.21□□□□□ -1.74
NPC1-213ENST00000591955 RHPN1-AS1Q9BWJ2 59 aa4.21□□□□□ -1.74
NPC1-213ENST00000591955 DCHS2Q6V1P9 2916 aa4.21□□□□□ -1.74
NPC1-213ENST00000591955 A0A087WZ39 114 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 IGHV3-35A0A0C4DH35 117 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 A0A1B0GW54 56 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 TRBV6-4A0A1B0GX49 114 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 F8WEM9 126 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 DEFB114Q30KQ6 69 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 LINC00242Q5T6M2 205 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 C9orf66Q5T8R8 295 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 ENHOQ6UWT2 76 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 FP248Q71RG6 208 aaPredicted RBP4.2□□□□□ -1.74
NPC1-213ENST00000591955 MIR7-3HGQ8N6C7 128 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 C5orf56Q8N8D9 126 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 Q9HAA7 133 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 PLCE1Q9P212 2302 aa4.2□□□□□ -1.74
NPC1-213ENST00000591955 PRRC2CQ9Y520 2896 aaKnown RBP4.19□□□□□ -1.74
NPC1-213ENST00000591955 A0A087WYN8 130 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 A8MTW9 85 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 E7EQL1 145 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 K7EQD1 137 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 IGHV4-38-2P0DP08 117 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 RPL36AP83881 106 aaKnown RBP4.19□□□□□ -1.74
NPC1-213ENST00000591955 COX17Q14061 63 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 SOSTDC1Q6X4U4 206 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 Q6ZSV7 163 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 Q8N9P0 234 aaPredicted RBP4.19□□□□□ -1.74
NPC1-213ENST00000591955 COX7B2Q8TF08 81 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 RPL36ALQ969Q0 106 aaKnown RBP4.19□□□□□ -1.74
NPC1-213ENST00000591955 FAM104AQ969W3 186 aa4.19□□□□□ -1.74
NPC1-213ENST00000591955 TACC2O95359 2948 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 NACAE9PAV3 2078 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 FLNAP21333 2647 aaKnown RBP4.18□□□□□ -1.74
NPC1-213ENST00000591955 IGHV3OR16-12A0A075B7B8 117 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 IGHV3OR16-13A0A075B7E8 117 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 IGHV3OR16-8A0A075B7F1 116 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 IGHV3-74A0A0B4J1X5 117 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 TRBV7-4A0A0J9YYF1 115 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 DNAJC9-AS1A6NH13 148 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 PRB4P10163 310 aaPredicted RBP4.18□□□□□ -1.74
NPC1-213ENST00000591955 ADORA2A-AS1P86434 159 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 C6orf223Q8N319 242 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 LINC00337Q8N6G1 96 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 WFDC11Q8NEX6 87 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 SIRPDQ9H106 197 aa4.18□□□□□ -1.74
NPC1-213ENST00000591955 NIPBLQ6KC79 2804 aaeCLIP4.17□□□□□ -1.74
NPC1-213ENST00000591955 CADP27708 2225 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 NSD1Q96L73 2696 aaPredicted RBP4.17□□□□□ -1.74
NPC1-213ENST00000591955 IGHV3-49A0A0A0MS15 119 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 IGKV2-29A2NJV5 120 aaPredicted RBP4.17□□□□□ -1.74
NPC1-213ENST00000591955 K7EQG2 157 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 NCR3O14931 201 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 UBE2L6O14933 153 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 FUSP35637 526 aaKnown RBP eCLIP4.17□□□□□ -1.74
NPC1-213ENST00000591955 LINC01547P58512 204 aaPredicted RBP4.17□□□□□ -1.74
NPC1-213ENST00000591955 LINC00158P58513 81 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 Q1T7F1 81 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 FBXL19-AS1Q494R0 122 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 STHQ8IWL8 128 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 Q8N814 137 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 CSPG4Q6UVK1 2322 aa4.17□□□□□ -1.74
NPC1-213ENST00000591955 IGKV2-28A0A075B6P5 120 aa4.16□□□□□ -1.74
NPC1-213ENST00000591955 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
NPC1-213ENST00000591955 CCL21O00585 134 aa4.16□□□□□ -1.74
NPC1-213ENST00000591955 PRYO14603 147 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms