RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 GEMIN7Q9H840 131 aaKnown RBP4.2□□□□□ -1.74
VPS4B-205ENST00000591383 IGHV1-58A0A0C4DH39 117 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 A0A0J9YXV3 536 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 CDK2AP2O75956 126 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 FABP4P15090 132 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 SPAG11BQ08648 103 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 PMVKQ15126 192 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 ORAOV1Q8WV07 137 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 IFI27L1Q96BM0 104 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 LINC00526Q96FQ7 95 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 AMELXQ99217 191 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 CHAC1Q9BUX1 264 aa4.19□□□□□ -1.74
VPS4B-205ENST00000591383 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
VPS4B-205ENST00000591383 NUPR1O60356 82 aa4.18□□□□□ -1.74
VPS4B-205ENST00000591383 LEPROTL1O95214 131 aa4.18□□□□□ -1.74
VPS4B-205ENST00000591383 APOMO95445 188 aa4.18□□□□□ -1.74
VPS4B-205ENST00000591383 PRSS1P07477 247 aa4.18□□□□□ -1.74
VPS4B-205ENST00000591383 HERVK_113P63121 156 aa4.18□□□□□ -1.74
VPS4B-205ENST00000591383 LINC01620Q4KN68 170 aa4.18□□□□□ -1.74
VPS4B-205ENST00000591383 LINC00242Q5T6M2 205 aa4.18□□□□□ -1.74
VPS4B-205ENST00000591383 PACRGQ96M98 296 aaPredicted RBP4.18□□□□□ -1.74
VPS4B-205ENST00000591383 CST9LQ9H4G1 147 aa4.18□□□□□ -1.74
VPS4B-205ENST00000591383 HSPB8Q9UJY1 196 aa4.18□□□□□ -1.74
VPS4B-205ENST00000591383 GVQW2A0A096LPI5 108 aaPredicted RBP4.17□□□□□ -1.74
VPS4B-205ENST00000591383 SEC11AP67812 179 aa4.17□□□□□ -1.74
VPS4B-205ENST00000591383 COX6A2Q02221 97 aa4.17□□□□□ -1.74
VPS4B-205ENST00000591383 CARD19Q96LW7 228 aa4.17□□□□□ -1.74
VPS4B-205ENST00000591383 KRTAP9-3Q9BYQ3 159 aa4.17□□□□□ -1.74
VPS4B-205ENST00000591383 TOMM7Q9P0U1 55 aa4.17□□□□□ -1.74
VPS4B-205ENST00000591383 CDKN2A-AS1Q9UH64 79 aa4.17□□□□□ -1.74
VPS4B-205ENST00000591383 CHTOPQ9Y3Y2 248 aaKnown RBP4.17□□□□□ -1.74
VPS4B-205ENST00000591383 LRP1BQ9NZR2 4599 aa4.17□□□□□ -1.74
VPS4B-205ENST00000591383 IGLV4-69A0A075B6H9 119 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 IGHV3-64A0A075B6Q5 118 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 A0A087WZ39 114 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.16□□□□□ -1.74
VPS4B-205ENST00000591383 IGHV3OR16-9A0A0B4J2B5 98 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 TINCRA0A1B0GVN0 87 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 H3BRM9 83 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 S100A6P06703 90 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 SPINK8P0C7L1 97 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 IGLC3P0DOY3 106 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 SRSF9Q13242 221 aaKnown RBP eCLIP4.16□□□□□ -1.74
VPS4B-205ENST00000591383 OR10D4PQ8NGN7 298 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 CAMK2N2Q96S95 79 aa4.16□□□□□ -1.74
VPS4B-205ENST00000591383 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.74
VPS4B-205ENST00000591383 C11orf86A6NJI1 115 aa4.15□□□□□ -1.75
VPS4B-205ENST00000591383 ZNF22P17026 224 aaPredicted RBP4.15□□□□□ -1.75
VPS4B-205ENST00000591383 KRTAP10-1P60331 282 aa4.15□□□□□ -1.75
VPS4B-205ENST00000591383 CNBPP62633 177 aaKnown RBP4.15□□□□□ -1.75
VPS4B-205ENST00000591383 HAMPP81172 84 aa4.15□□□□□ -1.75
VPS4B-205ENST00000591383 TMEM170BQ5T4T1 132 aa4.15□□□□□ -1.75
VPS4B-205ENST00000591383 PMCHL2Q9BQD1 86 aa4.15□□□□□ -1.75
VPS4B-205ENST00000591383 MAP1LC3CQ9BXW4 147 aa4.15□□□□□ -1.75
VPS4B-205ENST00000591383 MRPL35Q9NZE8 188 aaKnown RBP4.15□□□□□ -1.75
VPS4B-205ENST00000591383 APOBP04114 4563 aaKnown RBP4.14□□□□□ -1.75
VPS4B-205ENST00000591383 TRAV12-1A0A0B4J245 112 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 SMIM1B2RUZ4 78 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 F8VRH5 84 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 NDUFA1O15239 70 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 PLNP26678 52 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 S100A2P29034 98 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 KRTDAPP60985 99 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 RPL18AQ02543 176 aaKnown RBP4.14□□□□□ -1.75
VPS4B-205ENST00000591383 SYCNQ0VAF6 134 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 COA6Q5JTJ3 125 aaKnown RBP4.14□□□□□ -1.75
VPS4B-205ENST00000591383 Q6ZRU5 148 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 FAM19A3Q7Z5A8 133 aa4.14□□□□□ -1.75
VPS4B-205ENST00000591383 IGKV2-24A0A0C4DH68 120 aa4.13□□□□□ -1.75
VPS4B-205ENST00000591383 DPM2O94777 84 aa4.13□□□□□ -1.75
VPS4B-205ENST00000591383 CKS1BP61024 79 aa4.13□□□□□ -1.75
VPS4B-205ENST00000591383 C2orf82Q6UX34 121 aa4.13□□□□□ -1.75
VPS4B-205ENST00000591383 COX7B2Q8TF08 81 aa4.13□□□□□ -1.75
VPS4B-205ENST00000591383 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
VPS4B-205ENST00000591383 C20orf202A1L168 122 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 SYS1-DBNDD2H3BUS1 97 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 CHTF8P0CG12 524 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 MAJINQ3KP22 176 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 C6orf226Q5I0X4 101 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 Q8IZM0 81 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 LINC01561Q8N1V8 128 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 HIST3H2BBQ8N257 126 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 C2orf48Q96LS8 159 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 PKIGQ9Y2B9 76 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 HSPG2P98160 4391 aa4.12□□□□□ -1.75
VPS4B-205ENST00000591383 LOC107984640A0A0U1RRK4 108 aa4.11□□□□□ -1.75
VPS4B-205ENST00000591383 IGKCP01834 107 aa4.11□□□□□ -1.75
VPS4B-205ENST00000591383 C3orf79P0CE67 100 aa4.11□□□□□ -1.75
VPS4B-205ENST00000591383 HERVK_113P61574 105 aa4.11□□□□□ -1.75
VPS4B-205ENST00000591383 UNQ6190/PRO20217Q6UXQ8 127 aa4.11□□□□□ -1.75
VPS4B-205ENST00000591383 STPG4Q8N801 248 aa4.11□□□□□ -1.75
VPS4B-205ENST00000591383 C9orf163Q8N9P6 203 aa4.11□□□□□ -1.75
VPS4B-205ENST00000591383 HIST1H2BLQ99880 126 aa4.11□□□□□ -1.75
VPS4B-205ENST00000591383 C6orf48Q9UBA6 75 aa4.11□□□□□ -1.75
VPS4B-205ENST00000591383 A0A096LNI7 61 aa4.1□□□□□ -1.75
VPS4B-205ENST00000591383 TMEM223A0PJW6 202 aa4.1□□□□□ -1.75
VPS4B-205ENST00000591383 IGKV2-30P06310 120 aa4.1□□□□□ -1.75
VPS4B-205ENST00000591383 CXCL5P42830 114 aa4.1□□□□□ -1.75
VPS4B-205ENST00000591383 KIAA0087Q14695 138 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms