RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 AKAP9Q99996 3911 aa10.73□□□□□ -0.69
CIRBP-228ENST00000590347 A8MTW9 85 aa10.73□□□□□ -0.69
CIRBP-228ENST00000590347 DEFB131AP59861 70 aa10.73□□□□□ -0.69
CIRBP-228ENST00000590347 KHDC1LQ5JSQ8 128 aa10.73□□□□□ -0.69
CIRBP-228ENST00000590347 TRBV7-6A0A0J9YX20 115 aa10.71□□□□□ -0.69
CIRBP-228ENST00000590347 LRCOL1A6NCL2 159 aa10.71□□□□□ -0.69
CIRBP-228ENST00000590347 COPS9Q8WXC6 57 aa10.71□□□□□ -0.69
CIRBP-228ENST00000590347 V9GYY9 64 aa10.71□□□□□ -0.69
CIRBP-228ENST00000590347 F8WDY8 70 aa10.71□□□□□ -0.69
CIRBP-228ENST00000590347 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
CIRBP-228ENST00000590347 IL17DQ8TAD2 202 aa10.71□□□□□ -0.69
CIRBP-228ENST00000590347 NBPF19A0A087WUL8 3843 aa10.71□□□□□ -0.7
CIRBP-228ENST00000590347 NF1P21359 2839 aa10.71□□□□□ -0.7
CIRBP-228ENST00000590347 OBSCN-AS1Q96MR7 158 aa10.71□□□□□ -0.7
CIRBP-228ENST00000590347 KRTAP10-9P60411 292 aa10.7□□□□□ -0.7
CIRBP-228ENST00000590347 SPATA3Q8NHX4 192 aa10.7□□□□□ -0.7
CIRBP-228ENST00000590347 UBE2E2Q96LR5 201 aa10.7□□□□□ -0.7
CIRBP-228ENST00000590347 UBL5Q9BZL1 73 aa10.7□□□□□ -0.7
CIRBP-228ENST00000590347 MTORP42345 2549 aa10.7□□□□□ -0.7
CIRBP-228ENST00000590347 APCP25054 2843 aa10.69□□□□□ -0.7
CIRBP-228ENST00000590347 COX7B2Q8TF08 81 aa10.69□□□□□ -0.7
CIRBP-228ENST00000590347 TM2D3Q9BRN9 247 aa10.69□□□□□ -0.7
CIRBP-228ENST00000590347 TRGV1A0A0A0MS02 117 aa10.68□□□□□ -0.7
CIRBP-228ENST00000590347 K7EQG2 157 aa10.68□□□□□ -0.7
CIRBP-228ENST00000590347 SMIM26A0A096LP01 95 aa10.68□□□□□ -0.7
CIRBP-228ENST00000590347 DEFB136Q30KP8 78 aa10.68□□□□□ -0.7
CIRBP-228ENST00000590347 ZNF469Q96JG9 3925 aaPredicted RBP10.68□□□□□ -0.7
CIRBP-228ENST00000590347 H0YGX0 51 aa10.67□□□□□ -0.7
CIRBP-228ENST00000590347 UBR5O95071 2799 aaPredicted RBP10.67□□□□□ -0.7
CIRBP-228ENST00000590347 A0A087WZ39 114 aa10.67□□□□□ -0.7
CIRBP-228ENST00000590347 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
CIRBP-228ENST00000590347 KLK9Q2XQG4 91 aa10.67□□□□□ -0.7
CIRBP-228ENST00000590347 NDUFC2-KCTD14E9PQ53 114 aa10.66□□□□□ -0.7
CIRBP-228ENST00000590347 USMG5Q96IX5 58 aa10.66□□□□□ -0.7
CIRBP-228ENST00000590347 MSMBP08118 114 aa10.66□□□□□ -0.7
CIRBP-228ENST00000590347 HELZ2Q9BYK8 2649 aaKnown RBP10.65□□□□□ -0.7
CIRBP-228ENST00000590347 TENM4Q6N022 2769 aa10.65□□□□□ -0.7
CIRBP-228ENST00000590347 CR1P17927 2039 aa10.65□□□□□ -0.7
CIRBP-228ENST00000590347 PRB2P02812 416 aaPredicted RBP10.65□□□□□ -0.7
CIRBP-228ENST00000590347 CLPSL2Q6UWE3 100 aa10.65□□□□□ -0.7
CIRBP-228ENST00000590347 ZNF843Q8N446 348 aa10.65□□□□□ -0.7
CIRBP-228ENST00000590347 CDC42SE2Q9NRR3 84 aa10.65□□□□□ -0.7
CIRBP-228ENST00000590347 DAD1P61803 113 aa10.65□□□□□ -0.7
CIRBP-228ENST00000590347 UBE2L6O14933 153 aa10.64□□□□□ -0.71
CIRBP-228ENST00000590347 Q8N9L7 120 aa10.64□□□□□ -0.71
CIRBP-228ENST00000590347 OVOL2Q9BRP0 275 aa10.64□□□□□ -0.71
CIRBP-228ENST00000590347 TRAV7A0A075B6U4 112 aa10.63□□□□□ -0.71
CIRBP-228ENST00000590347 PF4P02776 101 aa10.63□□□□□ -0.71
CIRBP-228ENST00000590347 LAMTOR3Q9UHA4 124 aa10.63□□□□□ -0.71
CIRBP-228ENST00000590347 A0A096LNT2 108 aa10.62□□□□□ -0.71
CIRBP-228ENST00000590347 ITPR2Q14571 2701 aa10.62□□□□□ -0.71
CIRBP-228ENST00000590347 IGHV4-59P01825 116 aa10.62□□□□□ -0.71
CIRBP-228ENST00000590347 LINC01547P58512 204 aaPredicted RBP10.62□□□□□ -0.71
CIRBP-228ENST00000590347 FLNAP21333 2647 aaKnown RBP10.62□□□□□ -0.71
CIRBP-228ENST00000590347 Q8N3U1 123 aa10.62□□□□□ -0.71
CIRBP-228ENST00000590347 EPM2AB3EWF7 344 aa10.61□□□□□ -0.71
CIRBP-228ENST00000590347 HECTD1Q9ULT8 2610 aa10.61□□□□□ -0.71
CIRBP-228ENST00000590347 IGLV4-60A0A075B6I1 120 aa10.61□□□□□ -0.71
CIRBP-228ENST00000590347 GCN1Q92616 2671 aaKnown RBP10.6□□□□□ -0.71
CIRBP-228ENST00000590347 PLA2G2AP14555 144 aa10.6□□□□□ -0.71
CIRBP-228ENST00000590347 ITPR3Q14573 2671 aa10.6□□□□□ -0.71
CIRBP-228ENST00000590347 C18orf65Q6ZTR6 163 aa10.6□□□□□ -0.71
CIRBP-228ENST00000590347 Q8N814 137 aa10.6□□□□□ -0.71
CIRBP-228ENST00000590347 DEFB112Q30KQ8 113 aa10.6□□□□□ -0.71
CIRBP-228ENST00000590347 C6orf226Q5I0X4 101 aa10.59□□□□□ -0.71
CIRBP-228ENST00000590347 B4DSR2 109 aa10.58□□□□□ -0.72
CIRBP-228ENST00000590347 C9orf116Q5BN46 136 aaPredicted RBP10.58□□□□□ -0.72
CIRBP-228ENST00000590347 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
CIRBP-228ENST00000590347 C6orf99Q4VX62 202 aa10.58□□□□□ -0.72
CIRBP-228ENST00000590347 Q6ZVQ6 151 aa10.58□□□□□ -0.72
CIRBP-228ENST00000590347 SETXQ7Z333 2677 aaKnown RBP10.58□□□□□ -0.72
CIRBP-228ENST00000590347 SLURP1P55000 103 aa10.57□□□□□ -0.72
CIRBP-228ENST00000590347 KLKP1Q107X0 134 aa10.57□□□□□ -0.72
CIRBP-228ENST00000590347 TRBV10-1A0A0K0K1A3 114 aa10.57□□□□□ -0.72
CIRBP-228ENST00000590347 FASNP49327 2511 aaKnown RBP10.56□□□□□ -0.72
CIRBP-228ENST00000590347 JMJD7-PLA2G4BH0Y9G9 81 aa10.56□□□□□ -0.72
CIRBP-228ENST00000590347 NANOS2P60321 138 aaKnown RBP10.56□□□□□ -0.72
CIRBP-228ENST00000590347 K7EMT4 169 aa10.56□□□□□ -0.72
CIRBP-228ENST00000590347 IGLV1-40P01703 118 aa10.56□□□□□ -0.72
CIRBP-228ENST00000590347 MIFP14174 115 aa10.55□□□□□ -0.72
CIRBP-228ENST00000590347 ATP5EP2Q5VTU8 51 aa10.55□□□□□ -0.72
CIRBP-228ENST00000590347 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.55□□□□□ -0.72
CIRBP-228ENST00000590347 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
CIRBP-228ENST00000590347 A6NDX4 124 aa10.53□□□□□ -0.72
CIRBP-228ENST00000590347 K7EQD1 137 aa10.52□□□□□ -0.73
CIRBP-228ENST00000590347 Q8NDZ9 215 aa10.52□□□□□ -0.73
CIRBP-228ENST00000590347 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.73
CIRBP-228ENST00000590347 Q6ZQT0 140 aa10.51□□□□□ -0.73
CIRBP-228ENST00000590347 LINC01356Q8N9X3 169 aa10.51□□□□□ -0.73
CIRBP-228ENST00000590347 A0A096LPF7 62 aa10.5□□□□□ -0.73
CIRBP-228ENST00000590347 NREPQ16612 68 aa10.5□□□□□ -0.73
CIRBP-228ENST00000590347 TMEM254Q8TBM7 123 aa10.5□□□□□ -0.73
CIRBP-228ENST00000590347 IBA57-AS1B1ANH7 110 aa10.49□□□□□ -0.73
CIRBP-228ENST00000590347 PRR4Q16378 134 aa10.49□□□□□ -0.73
CIRBP-228ENST00000590347 C11orf44Q8N8P7 122 aa10.49□□□□□ -0.73
CIRBP-228ENST00000590347 IGHV3OR16-9A0A0B4J2B5 98 aa10.49□□□□□ -0.73
CIRBP-228ENST00000590347 IGLV10-54A0A075B6I4 117 aa10.49□□□□□ -0.73
CIRBP-228ENST00000590347 PSPHP1O15172 72 aa10.48□□□□□ -0.73
CIRBP-228ENST00000590347 Q6ZQY7 126 aa10.48□□□□□ -0.73
CIRBP-228ENST00000590347 TRGV2A0A075B6R0 118 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms