RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 LINC00269Q8N2A0 174 aa13.21□□□□□ -0.29
PRKCSH-209ENST00000589838 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-209ENST00000589838 CLPSL2Q6UWE3 100 aa13.2□□□□□ -0.3
PRKCSH-209ENST00000589838 PFN2P35080 140 aa13.19□□□□□ -0.3
PRKCSH-209ENST00000589838 RPL28P46779 137 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-209ENST00000589838 CCL18P55774 89 aa13.19□□□□□ -0.3
PRKCSH-209ENST00000589838 LELP1Q5T871 98 aa13.19□□□□□ -0.3
PRKCSH-209ENST00000589838 TRACP01848 142 aa13.19□□□□□ -0.3
PRKCSH-209ENST00000589838 CXCL5P42830 114 aa13.19□□□□□ -0.3
PRKCSH-209ENST00000589838 REG3AQ06141 175 aa13.19□□□□□ -0.3
PRKCSH-209ENST00000589838 CKS1BP61024 79 aa13.18□□□□□ -0.3
PRKCSH-209ENST00000589838 CHCHD10Q8WYQ3 142 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-209ENST00000589838 TEX49A0A1B0GTD5 131 aa13.17□□□□□ -0.3
PRKCSH-209ENST00000589838 HTN3P15516 51 aa13.17□□□□□ -0.3
PRKCSH-209ENST00000589838 CFAP161Q6P656 301 aa13.16□□□□□ -0.3
PRKCSH-209ENST00000589838 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
PRKCSH-209ENST00000589838 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
PRKCSH-209ENST00000589838 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
PRKCSH-209ENST00000589838 LINC00337Q8N6G1 96 aa13.16□□□□□ -0.3
PRKCSH-209ENST00000589838 C11orf68Q9H3H3 251 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-209ENST00000589838 HIVEP1P15822 2718 aa13.15□□□□□ -0.3
PRKCSH-209ENST00000589838 MALP21145 153 aa13.15□□□□□ -0.3
PRKCSH-209ENST00000589838 VWFP04275 2813 aa13.15□□□□□ -0.3
PRKCSH-209ENST00000589838 FLNBO75369 2602 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-209ENST00000589838 TRAV8-4A0A0B4J246 113 aa13.14□□□□□ -0.31
PRKCSH-209ENST00000589838 COX17Q14061 63 aa13.14□□□□□ -0.31
PRKCSH-209ENST00000589838 DEFB121Q5J5C9 76 aa13.14□□□□□ -0.31
PRKCSH-209ENST00000589838 TEP1Q99973 2627 aaKnown RBP13.13□□□□□ -0.31
PRKCSH-209ENST00000589838 H0YGX0 51 aa13.12□□□□□ -0.31
PRKCSH-209ENST00000589838 XGP55808 180 aa13.11□□□□□ -0.31
PRKCSH-209ENST00000589838 KIAA0087Q14695 138 aa13.11□□□□□ -0.31
PRKCSH-209ENST00000589838 IGLV10-54A0A075B6I4 117 aa13.1□□□□□ -0.31
PRKCSH-209ENST00000589838 NBEAL2Q6ZNJ1 2754 aa13.1□□□□□ -0.31
PRKCSH-209ENST00000589838 MT-ATP8P03928 68 aa13.1□□□□□ -0.31
PRKCSH-209ENST00000589838 SMIM11BQ8TCY0 68 aa13.1□□□□□ -0.31
PRKCSH-209ENST00000589838 TENM1Q9UKZ4 2725 aa13.1□□□□□ -0.31
PRKCSH-209ENST00000589838 OXLD1Q5BKU9 147 aa13.09□□□□□ -0.31
PRKCSH-209ENST00000589838 KLK5Q9Y337 293 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-209ENST00000589838 H3BNG1 76 aa13.08□□□□□ -0.32
PRKCSH-209ENST00000589838 BAALC-AS2P0C853 105 aa13.08□□□□□ -0.32
PRKCSH-209ENST00000589838 Q8N3U1 123 aa13.08□□□□□ -0.32
PRKCSH-209ENST00000589838 ATRQ13535 2644 aa13.08□□□□□ -0.32
PRKCSH-209ENST00000589838 OR13C6PQ8NH95 151 aa13.08□□□□□ -0.32
PRKCSH-209ENST00000589838 FAM240AA0A1B0GVK7 77 aa13.07□□□□□ -0.32
PRKCSH-209ENST00000589838 EGFEM1PQ0D2K5 195 aa13.07□□□□□ -0.32
PRKCSH-209ENST00000589838 PRR34Q9NV39 138 aa13.07□□□□□ -0.32
PRKCSH-209ENST00000589838 NDUFC2O95298 119 aa13.06□□□□□ -0.32
PRKCSH-209ENST00000589838 KRTAP10-11P60412 298 aa13.06□□□□□ -0.32
PRKCSH-209ENST00000589838 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
PRKCSH-209ENST00000589838 MUC7Q8TAX7 377 aa13.06□□□□□ -0.32
PRKCSH-209ENST00000589838 FAM218AQ96MZ4 157 aa13.06□□□□□ -0.32
PRKCSH-209ENST00000589838 C3orf56Q8N813 242 aa13.05□□□□□ -0.32
PRKCSH-209ENST00000589838 DNAL4O96015 105 aa13.04□□□□□ -0.32
PRKCSH-209ENST00000589838 KRTAP24-1Q3LI83 254 aa13.04□□□□□ -0.32
PRKCSH-209ENST00000589838 KLK12Q9UKR0 248 aa13.04□□□□□ -0.32
PRKCSH-209ENST00000589838 SNCGO76070 127 aa13.02□□□□□ -0.32
PRKCSH-209ENST00000589838 ACYP1P07311 99 aa13.02□□□□□ -0.32
PRKCSH-209ENST00000589838 SPAG11BQ08648 103 aa13.02□□□□□ -0.33
PRKCSH-209ENST00000589838 KPRPQ5T749 579 aaPredicted RBP13□□□□□ -0.33
PRKCSH-209ENST00000589838 ENHOQ6UWT2 76 aa13□□□□□ -0.33
PRKCSH-209ENST00000589838 RETNQ9HD89 108 aa13□□□□□ -0.33
PRKCSH-209ENST00000589838 INAFM2P0DMQ5 153 aa12.99□□□□□ -0.33
PRKCSH-209ENST00000589838 Q9HAA7 133 aa12.99□□□□□ -0.33
PRKCSH-209ENST00000589838 A0A087WYN8 130 aa12.98□□□□□ -0.33
PRKCSH-209ENST00000589838 TMEM126AQ9H061 195 aa12.98□□□□□ -0.33
PRKCSH-209ENST00000589838 A0A0J9YWU9 116 aa12.97□□□□□ -0.33
PRKCSH-209ENST00000589838 A0A1B0GV72 72 aa12.97□□□□□ -0.33
PRKCSH-209ENST00000589838 C15orf53Q8NAA6 179 aa12.97□□□□□ -0.33
PRKCSH-209ENST00000589838 C9orf116Q5BN46 136 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-209ENST00000589838 A0A1B0GX51 115 aa12.95□□□□□ -0.34
PRKCSH-209ENST00000589838 UNQ6190/PRO20217Q6UXQ8 127 aa12.95□□□□□ -0.34
PRKCSH-209ENST00000589838 Q6ZTC4 211 aa12.95□□□□□ -0.34
PRKCSH-209ENST00000589838 CYSRT1A8MQ03 144 aa12.95□□□□□ -0.34
PRKCSH-209ENST00000589838 GAGE2BQ13066 116 aa12.95□□□□□ -0.34
PRKCSH-209ENST00000589838 GAGE2EQ4V326 116 aa12.95□□□□□ -0.34
PRKCSH-209ENST00000589838 GAGE2DQ9UEU5 116 aa12.95□□□□□ -0.34
PRKCSH-209ENST00000589838 GVQW2A0A096LPI5 108 aaPredicted RBP12.94□□□□□ -0.34
PRKCSH-209ENST00000589838 LECT2O14960 151 aa12.94□□□□□ -0.34
PRKCSH-209ENST00000589838 C22orf24Q9Y442 160 aa12.94□□□□□ -0.34
PRKCSH-209ENST00000589838 F8P00451 2351 aa12.93□□□□□ -0.34
PRKCSH-209ENST00000589838 Q6Q795 121 aa12.93□□□□□ -0.34
PRKCSH-209ENST00000589838 C6orf223Q8N319 242 aa12.93□□□□□ -0.34
PRKCSH-209ENST00000589838 PRR3P79522 188 aaKnown RBP12.92□□□□□ -0.34
PRKCSH-209ENST00000589838 C10orf25Q5T742 122 aa12.92□□□□□ -0.34
PRKCSH-209ENST00000589838 WFDC10BQ8IUB3 73 aa12.91□□□□□ -0.34
PRKCSH-209ENST00000589838 NANOS2P60321 138 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-209ENST00000589838 S100A7L2Q5SY68 101 aa12.9□□□□□ -0.34
PRKCSH-209ENST00000589838 ORMDL1Q9P0S3 153 aa12.9□□□□□ -0.34
PRKCSH-209ENST00000589838 C11orf45Q8TAV5 145 aa12.89□□□□□ -0.35
PRKCSH-209ENST00000589838 DEFB131BA0A096LNP1 70 aa12.88□□□□□ -0.35
PRKCSH-209ENST00000589838 LINC00526Q96FQ7 95 aa12.88□□□□□ -0.35
PRKCSH-209ENST00000589838 LINC00167Q96N53 147 aa12.88□□□□□ -0.35
PRKCSH-209ENST00000589838 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
PRKCSH-209ENST00000589838 NCR3O14931 201 aa12.87□□□□□ -0.35
PRKCSH-209ENST00000589838 ESRGQ1W209 222 aa12.87□□□□□ -0.35
PRKCSH-209ENST00000589838 TTC32Q5I0X7 151 aa12.87□□□□□ -0.35
PRKCSH-209ENST00000589838 TRRAPQ9Y4A5 3859 aa12.87□□□□□ -0.35
PRKCSH-209ENST00000589838 Q8N814 137 aa12.86□□□□□ -0.35
PRKCSH-209ENST00000589838 OBSCN-AS1Q96MR7 158 aa12.86□□□□□ -0.35
PRKCSH-209ENST00000589838 C6orf48Q9UBA6 75 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms