RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 BIRC6Q9NR09 4857 aa13.94□□□□□ -0.18
R3HDM4-204ENST00000589428 USP17L23D6RBM5 183 aa13.94□□□□□ -0.18
R3HDM4-204ENST00000589428 PCP2Q8IVA1 136 aa13.94□□□□□ -0.18
R3HDM4-204ENST00000589428 COX7B2Q8TF08 81 aa13.94□□□□□ -0.18
R3HDM4-204ENST00000589428 IGLV5-52A0A0A0MRZ9 124 aa13.93□□□□□ -0.18
R3HDM4-204ENST00000589428 FUSP35637 526 aaKnown RBP eCLIP13.93□□□□□ -0.18
R3HDM4-204ENST00000589428 KIAA0087Q14695 138 aa13.93□□□□□ -0.18
R3HDM4-204ENST00000589428 Q8IZM0 81 aa13.93□□□□□ -0.18
R3HDM4-204ENST00000589428 DNAH5Q8TE73 4624 aa13.93□□□□□ -0.18
R3HDM4-204ENST00000589428 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.92□□□□□ -0.18
R3HDM4-204ENST00000589428 LGALS3P17931 250 aaKnown RBP13.92□□□□□ -0.18
R3HDM4-204ENST00000589428 SPAG11BQ08648 103 aa13.92□□□□□ -0.18
R3HDM4-204ENST00000589428 C14orf144Q96I85 54 aa13.92□□□□□ -0.18
R3HDM4-204ENST00000589428 TP73-AS1Q9UF72 201 aa13.92□□□□□ -0.18
R3HDM4-204ENST00000589428 HIGD2BQ4VC39 106 aa13.91□□□□□ -0.18
R3HDM4-204ENST00000589428 LINC00526Q96FQ7 95 aa13.9□□□□□ -0.18
R3HDM4-204ENST00000589428 GVQW2A0A096LPI5 108 aaPredicted RBP13.9□□□□□ -0.18
R3HDM4-204ENST00000589428 PRSS2P07478 247 aa13.9□□□□□ -0.18
R3HDM4-204ENST00000589428 COX8AP10176 69 aa13.9□□□□□ -0.18
R3HDM4-204ENST00000589428 CFAP161Q6P656 301 aa13.9□□□□□ -0.18
R3HDM4-204ENST00000589428 NDUFA12Q9UI09 145 aa13.89□□□□□ -0.19
R3HDM4-204ENST00000589428 C6orf226Q5I0X4 101 aa13.88□□□□□ -0.19
R3HDM4-204ENST00000589428 PRO1933Q9H354 126 aa13.88□□□□□ -0.19
R3HDM4-204ENST00000589428 ZNF815PA8K554 130 aa13.87□□□□□ -0.19
R3HDM4-204ENST00000589428 ZNF625Q96I27 306 aaPredicted RBP13.87□□□□□ -0.19
R3HDM4-204ENST00000589428 C2orf82Q6UX34 121 aa13.87□□□□□ -0.19
R3HDM4-204ENST00000589428 BOD1L2Q8IYS8 172 aa13.87□□□□□ -0.19
R3HDM4-204ENST00000589428 LRP1BQ9NZR2 4599 aa13.86□□□□□ -0.19
R3HDM4-204ENST00000589428 MYMXA0A1B0GTQ4 84 aa13.86□□□□□ -0.19
R3HDM4-204ENST00000589428 ZNF561-AS1K7EIQ3 104 aa13.86□□□□□ -0.19
R3HDM4-204ENST00000589428 NDUFA1O15239 70 aa13.86□□□□□ -0.19
R3HDM4-204ENST00000589428 TSTD3H0UI37 97 aa13.85□□□□□ -0.19
R3HDM4-204ENST00000589428 GCSHP23434 173 aa13.84□□□□□ -0.19
R3HDM4-204ENST00000589428 SLC25A34Q6PIV7 304 aa13.84□□□□□ -0.19
R3HDM4-204ENST00000589428 CKS1BP61024 79 aa13.84□□□□□ -0.19
R3HDM4-204ENST00000589428 DLEU1O43261 78 aa13.83□□□□□ -0.2
R3HDM4-204ENST00000589428 CXCL5P42830 114 aa13.83□□□□□ -0.2
R3HDM4-204ENST00000589428 C10orf25Q5T742 122 aa13.81□□□□□ -0.2
R3HDM4-204ENST00000589428 C2orf48Q96LS8 159 aa13.81□□□□□ -0.2
R3HDM4-204ENST00000589428 UNQ6190/PRO20217Q6UXQ8 127 aa13.81□□□□□ -0.2
R3HDM4-204ENST00000589428 UQCR10Q9UDW1 63 aa13.81□□□□□ -0.2
R3HDM4-204ENST00000589428 SFTA2Q6UW10 78 aa13.8□□□□□ -0.2
R3HDM4-204ENST00000589428 CAMK2N2Q96S95 79 aa13.8□□□□□ -0.2
R3HDM4-204ENST00000589428 A0A0J9YXY3 114 aa13.79□□□□□ -0.2
R3HDM4-204ENST00000589428 LINC00587B1AMM8 73 aa13.79□□□□□ -0.2
R3HDM4-204ENST00000589428 SLPIP03973 132 aa13.79□□□□□ -0.2
R3HDM4-204ENST00000589428 KRTAP10-1P60331 282 aa13.78□□□□□ -0.2
R3HDM4-204ENST00000589428 HERV-K104P63124 156 aa13.78□□□□□ -0.2
R3HDM4-204ENST00000589428 SCGB1D4Q6XE38 83 aa13.78□□□□□ -0.2
R3HDM4-204ENST00000589428 Q6ZRU5 148 aa13.78□□□□□ -0.2
R3HDM4-204ENST00000589428 MIEN1Q9BRT3 115 aa13.78□□□□□ -0.2
R3HDM4-204ENST00000589428 DDTP30046 118 aa13.77□□□□□ -0.21
R3HDM4-204ENST00000589428 CNBPP62633 177 aaKnown RBP13.77□□□□□ -0.21
R3HDM4-204ENST00000589428 C2orf91Q6ZV80 131 aa13.77□□□□□ -0.21
R3HDM4-204ENST00000589428 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.76□□□□□ -0.21
R3HDM4-204ENST00000589428 F8WDY8 70 aa13.76□□□□□ -0.21
R3HDM4-204ENST00000589428 SYCNQ0VAF6 134 aa13.76□□□□□ -0.21
R3HDM4-204ENST00000589428 C6orf48Q9UBA6 75 aa13.76□□□□□ -0.21
R3HDM4-204ENST00000589428 LINC01620Q4KN68 170 aa13.76□□□□□ -0.21
R3HDM4-204ENST00000589428 C9orf116Q5BN46 136 aaPredicted RBP13.75□□□□□ -0.21
R3HDM4-204ENST00000589428 CARD19Q96LW7 228 aa13.74□□□□□ -0.21
R3HDM4-204ENST00000589428 TRBV30A0A0K0K1B3 111 aa13.73□□□□□ -0.21
R3HDM4-204ENST00000589428 LITAFQ99732 161 aa13.73□□□□□ -0.21
R3HDM4-204ENST00000589428 ERG28Q9UKR5 140 aa13.73□□□□□ -0.21
R3HDM4-204ENST00000589428 CDK2AP2O75956 126 aa13.73□□□□□ -0.21
R3HDM4-204ENST00000589428 MEIG1Q5JSS6 88 aa13.73□□□□□ -0.21
R3HDM4-204ENST00000589428 C9orf163Q8N9P6 203 aa13.73□□□□□ -0.21
R3HDM4-204ENST00000589428 SMIM13P0DJ93 91 aa13.72□□□□□ -0.21
R3HDM4-204ENST00000589428 APOBP04114 4563 aaKnown RBP13.71□□□□□ -0.21
R3HDM4-204ENST00000589428 A0A0U1RRA0 63 aa13.71□□□□□ -0.21
R3HDM4-204ENST00000589428 HIGD1BQ9P298 99 aa13.71□□□□□ -0.21
R3HDM4-204ENST00000589428 TIMM17BO60830 172 aa13.7□□□□□ -0.22
R3HDM4-204ENST00000589428 PFN2P35080 140 aa13.7□□□□□ -0.22
R3HDM4-204ENST00000589428 HNRNPA3P51991 378 aaKnown RBP13.7□□□□□ -0.22
R3HDM4-204ENST00000589428 ADAMTSL4-AS1Q5T5F5 129 aa13.7□□□□□ -0.22
R3HDM4-204ENST00000589428 KIAA1109Q2LD37 5005 aa13.68□□□□□ -0.22
R3HDM4-204ENST00000589428 TMEM238C9JI98 176 aa13.68□□□□□ -0.22
R3HDM4-204ENST00000589428 DAND5Q8N907 189 aa13.68□□□□□ -0.22
R3HDM4-204ENST00000589428 LINC00158P58513 81 aa13.67□□□□□ -0.22
R3HDM4-204ENST00000589428 CIRBPQ14011 172 aaKnown RBP13.67□□□□□ -0.22
R3HDM4-204ENST00000589428 RNF151Q2KHN1 245 aa13.67□□□□□ -0.22
R3HDM4-204ENST00000589428 DNAH8Q96JB1 4490 aa13.67□□□□□ -0.22
R3HDM4-204ENST00000589428 COX17Q14061 63 aa13.67□□□□□ -0.22
R3HDM4-204ENST00000589428 SPANXB1Q9NS25 103 aaPredicted RBP13.66□□□□□ -0.22
R3HDM4-204ENST00000589428 MIR7-3HGQ8N6C7 128 aa13.65□□□□□ -0.22
R3HDM4-204ENST00000589428 SPANXDQ9BXN6 97 aa13.64□□□□□ -0.23
R3HDM4-204ENST00000589428 SPANXCQ9NY87 97 aa13.64□□□□□ -0.23
R3HDM4-204ENST00000589428 FAM30AQ9NZY2 134 aa13.64□□□□□ -0.23
R3HDM4-204ENST00000589428 Q6ZSA8 131 aa13.64□□□□□ -0.23
R3HDM4-204ENST00000589428 RYR1P21817 5038 aa13.63□□□□□ -0.23
R3HDM4-204ENST00000589428 NDUFC2-KCTD14E9PQ53 114 aa13.63□□□□□ -0.23
R3HDM4-204ENST00000589428 SRSF9Q13242 221 aaKnown RBP eCLIP13.62□□□□□ -0.23
R3HDM4-204ENST00000589428 HIST1H4GQ99525 98 aa13.62□□□□□ -0.23
R3HDM4-204ENST00000589428 PKIGQ9Y2B9 76 aa13.62□□□□□ -0.23
R3HDM4-204ENST00000589428 HSPG2P98160 4391 aa13.62□□□□□ -0.23
R3HDM4-204ENST00000589428 XGP55808 180 aa13.61□□□□□ -0.23
R3HDM4-204ENST00000589428 CTAG1AP78358 180 aa13.61□□□□□ -0.23
R3HDM4-204ENST00000589428 SDIM1Q6ZPB5 146 aa13.61□□□□□ -0.23
R3HDM4-204ENST00000589428 EIF4EBP3O60516 100 aaPredicted RBP13.61□□□□□ -0.23
R3HDM4-204ENST00000589428 TLX1NBP0CAT3 122 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms