RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 ST20Q9HBF5 79 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 NXT2Q9NPJ8 142 aaKnown RBP4.89□□□□□ -1.63
RETREG3-207ENST00000589007 LOC389332A0A1B0GUA5 103 aa4.88□□□□□ -1.63
RETREG3-207ENST00000589007 GAGE12HA6NDE8 117 aa4.88□□□□□ -1.63
RETREG3-207ENST00000589007 PRSS47A8MTI9 375 aa4.88□□□□□ -1.63
RETREG3-207ENST00000589007 TCAPO15273 167 aa4.88□□□□□ -1.63
RETREG3-207ENST00000589007 HBDP02042 147 aa4.88□□□□□ -1.63
RETREG3-207ENST00000589007 C1orf137Q5JT78 98 aa4.88□□□□□ -1.63
RETREG3-207ENST00000589007 PHF5AQ7RTV0 110 aaKnown RBP4.88□□□□□ -1.63
RETREG3-207ENST00000589007 TRBV25-1A0A075B6N4 114 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 I3L3M4 83 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 K7EMI3 77 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 PPP1R17O96001 155 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 IFI27P40305 119 aaPredicted RBP4.87□□□□□ -1.63
RETREG3-207ENST00000589007 SUMO2P61956 95 aaKnown RBP4.87□□□□□ -1.63
RETREG3-207ENST00000589007 FOXI1Q12951 378 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 LINC01545Q5VT33 79 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 KRTAP7-1Q8IUC3 87 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 DIRC1Q969H9 104 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 SNHG12Q9BXW3 62 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 LINC00474Q9P2X8 69 aa4.87□□□□□ -1.63
RETREG3-207ENST00000589007 TRBV27A0A0K0K1C4 114 aa4.86□□□□□ -1.63
RETREG3-207ENST00000589007 MT1HP80294 61 aa4.86□□□□□ -1.63
RETREG3-207ENST00000589007 COTL1Q14019 142 aa4.86□□□□□ -1.63
RETREG3-207ENST00000589007 Q8N8P6 123 aa4.86□□□□□ -1.63
RETREG3-207ENST00000589007 PMCHL2Q9BQD1 86 aa4.86□□□□□ -1.63
RETREG3-207ENST00000589007 TMEM243Q9BU79 118 aa4.86□□□□□ -1.63
RETREG3-207ENST00000589007 A0A087X002 238 aa4.85□□□□□ -1.63
RETREG3-207ENST00000589007 LINC01549A6NIU2 74 aa4.85□□□□□ -1.63
RETREG3-207ENST00000589007 VCYO14598 125 aa4.85□□□□□ -1.63
RETREG3-207ENST00000589007 FCER1GP30273 86 aa4.85□□□□□ -1.63
RETREG3-207ENST00000589007 RPL39P62891 51 aaKnown RBP4.85□□□□□ -1.63
RETREG3-207ENST00000589007 C9orf116Q5BN46 136 aaPredicted RBP4.85□□□□□ -1.63
RETREG3-207ENST00000589007 RNASE13Q5GAN3 156 aaKnown RBP4.85□□□□□ -1.63
RETREG3-207ENST00000589007 COL5A1-AS1Q5SY13 56 aa4.85□□□□□ -1.63
RETREG3-207ENST00000589007 Q6ZN92 141 aa4.85□□□□□ -1.63
RETREG3-207ENST00000589007 RETNLBQ9BQ08 111 aa4.85□□□□□ -1.63
RETREG3-207ENST00000589007 C20orf78Q9BR46 151 aa4.85□□□□□ -1.63
RETREG3-207ENST00000589007 SMIM2Q9BVW6 85 aa4.85□□□□□ -1.63
RETREG3-207ENST00000589007 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.63
RETREG3-207ENST00000589007 A0A096LNJ9 63 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 IGKV3OR2-268A0A0C4DH90 116 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 ATP5LO75964 103 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 TSPAN13O95857 204 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 FGF6P10767 208 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 G0S2P27469 103 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 LINC01547P58512 204 aaPredicted RBP4.84□□□□□ -1.63
RETREG3-207ENST00000589007 SLC25A34Q6PIV7 304 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 LINC00469Q8N7U9 141 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 FAM104AQ969W3 186 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 IFI27L1Q96BM0 104 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 CARD19Q96LW7 228 aa4.84□□□□□ -1.63
RETREG3-207ENST00000589007 OPRPNQ99935 248 aaPredicted RBP4.84□□□□□ -1.63
RETREG3-207ENST00000589007 A0A1B0GV90 55 aa4.83□□□□□ -1.64
RETREG3-207ENST00000589007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.83□□□□□ -1.64
RETREG3-207ENST00000589007 RPL13AP40429 203 aaKnown RBP4.83□□□□□ -1.64
RETREG3-207ENST00000589007 RPL32P62910 135 aaKnown RBP4.83□□□□□ -1.64
RETREG3-207ENST00000589007 ORMDL2Q53FV1 153 aa4.83□□□□□ -1.64
RETREG3-207ENST00000589007 ZC2HC1BQ5TFG8 222 aa4.83□□□□□ -1.64
RETREG3-207ENST00000589007 ATOH7Q8N100 152 aa4.83□□□□□ -1.64
RETREG3-207ENST00000589007 CHCHD10Q8WYQ3 142 aaPredicted RBP4.83□□□□□ -1.64
RETREG3-207ENST00000589007 UBE2L6O14933 153 aa4.82□□□□□ -1.64
RETREG3-207ENST00000589007 DLEU1O43261 78 aa4.82□□□□□ -1.64
RETREG3-207ENST00000589007 COX8AP10176 69 aa4.82□□□□□ -1.64
RETREG3-207ENST00000589007 KRTAP10-6P60371 365 aaPredicted RBP4.82□□□□□ -1.64
RETREG3-207ENST00000589007 Q6ZUT4 128 aa4.82□□□□□ -1.64
RETREG3-207ENST00000589007 UBE2D4Q9Y2X8 147 aa4.82□□□□□ -1.64
RETREG3-207ENST00000589007 FAM168BA1KXE4 195 aa4.81□□□□□ -1.64
RETREG3-207ENST00000589007 ASB16-AS1Q495Z4 193 aa4.81□□□□□ -1.64
RETREG3-207ENST00000589007 AMMECR1LQ6DCA0 310 aa4.81□□□□□ -1.64
RETREG3-207ENST00000589007 CFAP161Q6P656 301 aa4.81□□□□□ -1.64
RETREG3-207ENST00000589007 KIR2DL4Q99706 377 aa4.81□□□□□ -1.64
RETREG3-207ENST00000589007 GAGE2BQ13066 116 aa4.8□□□□□ -1.64
RETREG3-207ENST00000589007 KRTAP13-2Q52LG2 175 aa4.8□□□□□ -1.64
RETREG3-207ENST00000589007 CDC42SE2Q9NRR3 84 aa4.8□□□□□ -1.64
RETREG3-207ENST00000589007 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
RETREG3-207ENST00000589007 TRAV12-1A0A0B4J245 112 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 LOC107984640A0A0U1RRK4 108 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 H0Y8G0 127 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 DPM2O94777 84 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 PLNP26678 52 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 UBE2D1P51668 147 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 SYCNQ0VAF6 134 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 BATFQ16520 125 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 C2orf66Q6UXQ4 117 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 BOD1L2Q8IYS8 172 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 OR5A1Q8NGJ0 315 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 CDIP1Q9H305 208 aa4.79□□□□□ -1.64
RETREG3-207ENST00000589007 H7C423 109 aa4.78□□□□□ -1.64
RETREG3-207ENST00000589007 IGKCP01834 107 aa4.78□□□□□ -1.64
RETREG3-207ENST00000589007 SEC11AP67812 179 aa4.78□□□□□ -1.64
RETREG3-207ENST00000589007 ORAOV1Q8WV07 137 aa4.78□□□□□ -1.64
RETREG3-207ENST00000589007 TOMM6Q96B49 74 aa4.78□□□□□ -1.64
RETREG3-207ENST00000589007 IGLV4-3A0A075B6K6 122 aa4.77□□□□□ -1.65
RETREG3-207ENST00000589007 TRAV13-1A0A0B4J241 112 aa4.77□□□□□ -1.65
RETREG3-207ENST00000589007 IGHV1-58A0A0C4DH39 117 aa4.77□□□□□ -1.65
RETREG3-207ENST00000589007 LINC00959A0A1B0GUT2 108 aa4.77□□□□□ -1.65
RETREG3-207ENST00000589007 IGIPA6NJ69 53 aa4.77□□□□□ -1.65
RETREG3-207ENST00000589007 XCL1P47992 114 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms