RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
ATG4D-210ENST00000588972 CLPSL2Q6UWE3 100 aa4.91□□□□□ -1.62
ATG4D-210ENST00000588972 BAALCQ8WXS3 180 aa4.91□□□□□ -1.62
ATG4D-210ENST00000588972 TMEM243Q9BU79 118 aa4.91□□□□□ -1.62
ATG4D-210ENST00000588972 TMEM70Q9BUB7 260 aa4.91□□□□□ -1.62
ATG4D-210ENST00000588972 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
ATG4D-210ENST00000588972 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.9□□□□□ -1.63
ATG4D-210ENST00000588972 IGKV2-29A2NJV5 120 aaPredicted RBP4.9□□□□□ -1.63
ATG4D-210ENST00000588972 D6R8Y8 96 aa4.9□□□□□ -1.63
ATG4D-210ENST00000588972 I3L3M4 83 aa4.9□□□□□ -1.63
ATG4D-210ENST00000588972 PSCAO43653 123 aa4.9□□□□□ -1.63
ATG4D-210ENST00000588972 ANGP03950 147 aaKnown RBP4.9□□□□□ -1.63
ATG4D-210ENST00000588972 TRGC2P03986 189 aa4.9□□□□□ -1.63
ATG4D-210ENST00000588972 RBX1P62877 108 aa4.9□□□□□ -1.63
ATG4D-210ENST00000588972 ORMDL3Q8N138 153 aa4.9□□□□□ -1.63
ATG4D-210ENST00000588972 UBE2WQ96B02 151 aa4.9□□□□□ -1.63
ATG4D-210ENST00000588972 CHCHD7Q9BUK0 85 aa4.9□□□□□ -1.63
ATG4D-210ENST00000588972 IGLV4-60A0A075B6I1 120 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 IGKV2D-24A0A075B6R9 120 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 A0A087WTM6 91 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 UBE2L6O14933 153 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 LECT2O14960 151 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 NPYP01303 97 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 CKS2P33552 79 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 POLR2KP53803 58 aaKnown RBP4.89□□□□□ -1.63
ATG4D-210ENST00000588972 HAMPP81172 84 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 WFDC2Q14508 124 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 ENHOQ6UWT2 76 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 MRPL55Q7Z7F7 128 aaKnown RBP4.89□□□□□ -1.63
ATG4D-210ENST00000588972 LINC00269Q8N2A0 174 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 C20orf78Q9BR46 151 aa4.89□□□□□ -1.63
ATG4D-210ENST00000588972 TRAV8-3A0A0A6YYJ7 113 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 TRBV27A0A0K0K1C4 114 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 LRCOL1A6NCL2 159 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 K7EMI3 77 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST1H2BKO60814 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 CRPP02741 224 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST1H2BJP06899 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST1H2BOP23527 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST1H2BBP33778 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST1H2BDP58876 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 PKIAP61925 76 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST1H2BCP62807 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 Q0VG73 95 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST2H2BEQ16778 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST1H2BHQ93079 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 PRELID3AQ96N28 172 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST1H2BNQ99877 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 HIST1H2BMQ99879 126 aa4.88□□□□□ -1.63
ATG4D-210ENST00000588972 IGLV10-54A0A075B6I4 117 aa4.87□□□□□ -1.63
ATG4D-210ENST00000588972 IGKV3OR2-268A0A0C4DH90 116 aa4.87□□□□□ -1.63
ATG4D-210ENST00000588972 TCAPO15273 167 aa4.87□□□□□ -1.63
ATG4D-210ENST00000588972 ESDP10768 282 aa4.87□□□□□ -1.63
ATG4D-210ENST00000588972 AMMECR1LQ6DCA0 310 aa4.87□□□□□ -1.63
ATG4D-210ENST00000588972 SMIM2Q9BVW6 85 aa4.87□□□□□ -1.63
ATG4D-210ENST00000588972 MAP1LC3CQ9BXW4 147 aa4.87□□□□□ -1.63
ATG4D-210ENST00000588972 MAP1LC3AQ9H492 121 aa4.87□□□□□ -1.63
ATG4D-210ENST00000588972 NXT2Q9NPJ8 142 aaKnown RBP4.87□□□□□ -1.63
ATG4D-210ENST00000588972 LOC105371267A0A1B0GV96 52 aa4.86□□□□□ -1.63
ATG4D-210ENST00000588972 FGF6P10767 208 aa4.86□□□□□ -1.63
ATG4D-210ENST00000588972 FCER1GP30273 86 aa4.86□□□□□ -1.63
ATG4D-210ENST00000588972 CAMK2N1Q7Z7J9 78 aa4.86□□□□□ -1.63
ATG4D-210ENST00000588972 C18orf32Q8TCD1 76 aa4.86□□□□□ -1.63
ATG4D-210ENST00000588972 RMI2Q96E14 147 aa4.86□□□□□ -1.63
ATG4D-210ENST00000588972 PRR34Q9NV39 138 aa4.86□□□□□ -1.63
ATG4D-210ENST00000588972 LOC389332A0A1B0GUA5 103 aa4.85□□□□□ -1.63
ATG4D-210ENST00000588972 LINC01549A6NIU2 74 aa4.85□□□□□ -1.63
ATG4D-210ENST00000588972 S100A6P06703 90 aa4.85□□□□□ -1.63
ATG4D-210ENST00000588972 G0S2P27469 103 aa4.85□□□□□ -1.63
ATG4D-210ENST00000588972 PRR3P79522 188 aaKnown RBP4.85□□□□□ -1.63
ATG4D-210ENST00000588972 MIAQ16674 131 aa4.85□□□□□ -1.63
ATG4D-210ENST00000588972 KRTAP26-1Q6PEX3 210 aa4.85□□□□□ -1.63
ATG4D-210ENST00000588972 BAGE3Q86Y29 109 aa4.85□□□□□ -1.63
ATG4D-210ENST00000588972 Q8N814 137 aa4.85□□□□□ -1.63
ATG4D-210ENST00000588972 CHCHD1Q96BP2 118 aaKnown RBP4.85□□□□□ -1.63
ATG4D-210ENST00000588972 RNF213Q63HN8 5207 aa4.85□□□□□ -1.63
ATG4D-210ENST00000588972 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.84□□□□□ -1.63
ATG4D-210ENST00000588972 LINC01546A6NGU7 62 aa4.84□□□□□ -1.63
ATG4D-210ENST00000588972 NMUP48645 174 aa4.84□□□□□ -1.63
ATG4D-210ENST00000588972 RPL39P62891 51 aaKnown RBP4.84□□□□□ -1.63
ATG4D-210ENST00000588972 VAMP3Q15836 100 aa4.84□□□□□ -1.63
ATG4D-210ENST00000588972 RNASE13Q5GAN3 156 aaKnown RBP4.84□□□□□ -1.63
ATG4D-210ENST00000588972 Q8N8P6 123 aa4.84□□□□□ -1.63
ATG4D-210ENST00000588972 PKHD1L1Q86WI1 4243 aa4.83□□□□□ -1.64
ATG4D-210ENST00000588972 HSBP1L1C9JCN9 74 aa4.83□□□□□ -1.64
ATG4D-210ENST00000588972 LINC00614P0C842 121 aa4.83□□□□□ -1.64
ATG4D-210ENST00000588972 ZNF25P17030 456 aaPredicted RBP4.83□□□□□ -1.64
ATG4D-210ENST00000588972 ORMDL2Q53FV1 153 aa4.83□□□□□ -1.64
ATG4D-210ENST00000588972 Q6ZUT4 128 aa4.83□□□□□ -1.64
ATG4D-210ENST00000588972 FA2HQ7L5A8 372 aa4.83□□□□□ -1.64
ATG4D-210ENST00000588972 MRPL52Q86TS9 123 aaKnown RBP4.83□□□□□ -1.64
ATG4D-210ENST00000588972 OR5A1Q8NGJ0 315 aa4.83□□□□□ -1.64
ATG4D-210ENST00000588972 PACRGQ96M98 296 aaPredicted RBP4.83□□□□□ -1.64
ATG4D-210ENST00000588972 UBE2D4Q9Y2X8 147 aa4.83□□□□□ -1.64
ATG4D-210ENST00000588972 PFN2P35080 140 aa4.82□□□□□ -1.64
ATG4D-210ENST00000588972 CXCL5P42830 114 aa4.82□□□□□ -1.64
ATG4D-210ENST00000588972 NDUFA6P56556 154 aa4.82□□□□□ -1.64
ATG4D-210ENST00000588972 ZNF664Q8N3J9 261 aa4.82□□□□□ -1.64
ATG4D-210ENST00000588972 CDC42SE2Q9NRR3 84 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms