RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ATOH7Q8N100 152 aa7.5□□□□□ -1.21
RFX1-204ENST00000588885 A0A0J9YXV3 536 aa7.49□□□□□ -1.21
RFX1-204ENST00000588885 C11orf86A6NJI1 115 aa7.49□□□□□ -1.21
RFX1-204ENST00000588885 IGLC3P0DOY3 106 aa7.49□□□□□ -1.21
RFX1-204ENST00000588885 CHAC1Q9BUX1 264 aa7.49□□□□□ -1.21
RFX1-204ENST00000588885 DPM2O94777 84 aa7.48□□□□□ -1.21
RFX1-204ENST00000588885 TRAV8-4A0A0B4J246 113 aa7.47□□□□□ -1.21
RFX1-204ENST00000588885 LINC00959A0A1B0GUT2 108 aa7.47□□□□□ -1.21
RFX1-204ENST00000588885 hDV102S1A0JD36 115 aa7.47□□□□□ -1.21
RFX1-204ENST00000588885 GAGE12HA6NDE8 117 aa7.47□□□□□ -1.21
RFX1-204ENST00000588885 IGKCP01834 107 aa7.47□□□□□ -1.21
RFX1-204ENST00000588885 SMIM6P0DI80 62 aa7.47□□□□□ -1.21
RFX1-204ENST00000588885 CIRBP-AS1Q8TBR5 109 aa7.47□□□□□ -1.21
RFX1-204ENST00000588885 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
RFX1-204ENST00000588885 ZNF22P17026 224 aaPredicted RBP7.46□□□□□ -1.22
RFX1-204ENST00000588885 PLNP26678 52 aa7.46□□□□□ -1.22
RFX1-204ENST00000588885 LINC00242Q5T6M2 205 aa7.46□□□□□ -1.22
RFX1-204ENST00000588885 FAM19A3Q7Z5A8 133 aa7.46□□□□□ -1.22
RFX1-204ENST00000588885 CCL25O15444 150 aa7.45□□□□□ -1.22
RFX1-204ENST00000588885 XCL1P47992 114 aa7.45□□□□□ -1.22
RFX1-204ENST00000588885 COX6A2Q02221 97 aa7.45□□□□□ -1.22
RFX1-204ENST00000588885 MAJINQ3KP22 176 aa7.45□□□□□ -1.22
RFX1-204ENST00000588885 LINC00469Q8N7U9 141 aa7.45□□□□□ -1.22
RFX1-204ENST00000588885 IGLV5-45A0A087WSX0 123 aa7.44□□□□□ -1.22
RFX1-204ENST00000588885 SS18Q15532 418 aa7.44□□□□□ -1.22
RFX1-204ENST00000588885 C9orf163Q8N9P6 203 aa7.44□□□□□ -1.22
RFX1-204ENST00000588885 CHCHD10Q8WYQ3 142 aaPredicted RBP7.44□□□□□ -1.22
RFX1-204ENST00000588885 KRTAP4-11Q9BYQ6 195 aa7.44□□□□□ -1.22
RFX1-204ENST00000588885 GEMIN7Q9H840 131 aaKnown RBP7.44□□□□□ -1.22
RFX1-204ENST00000588885 PANO1I0J062 215 aa7.43□□□□□ -1.22
RFX1-204ENST00000588885 SLPIP03973 132 aa7.43□□□□□ -1.22
RFX1-204ENST00000588885 HERVK_113P63121 156 aa7.43□□□□□ -1.22
RFX1-204ENST00000588885 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
RFX1-204ENST00000588885 TMEM170BQ5T4T1 132 aa7.43□□□□□ -1.22
RFX1-204ENST00000588885 DPH3Q96FX2 82 aa7.43□□□□□ -1.22
RFX1-204ENST00000588885 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.43□□□□□ -1.22
RFX1-204ENST00000588885 SPINK8P0C7L1 97 aa7.42□□□□□ -1.22
RFX1-204ENST00000588885 SEC11AP67812 179 aa7.42□□□□□ -1.22
RFX1-204ENST00000588885 FOXI1Q12951 378 aa7.42□□□□□ -1.22
RFX1-204ENST00000588885 ANKRD39Q53RE8 183 aa7.42□□□□□ -1.22
RFX1-204ENST00000588885 SDIM1Q6ZPB5 146 aa7.42□□□□□ -1.22
RFX1-204ENST00000588885 STPG4Q8N801 248 aa7.42□□□□□ -1.22
RFX1-204ENST00000588885 CDKN2A-AS1Q9UH64 79 aa7.42□□□□□ -1.22
RFX1-204ENST00000588885 PAM16Q9Y3D7 125 aa7.42□□□□□ -1.22
RFX1-204ENST00000588885 IGHV3-64A0A075B6Q5 118 aa7.41□□□□□ -1.22
RFX1-204ENST00000588885 TMEM223A0PJW6 202 aa7.41□□□□□ -1.22
RFX1-204ENST00000588885 CNBPP62633 177 aaKnown RBP7.41□□□□□ -1.22
RFX1-204ENST00000588885 CFAP161Q6P656 301 aa7.41□□□□□ -1.22
RFX1-204ENST00000588885 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
RFX1-204ENST00000588885 C5orf38Q86SI9 138 aa7.41□□□□□ -1.22
RFX1-204ENST00000588885 C15orf56Q8N910 161 aa7.41□□□□□ -1.22
RFX1-204ENST00000588885 C12orf57Q99622 126 aa7.41□□□□□ -1.22
RFX1-204ENST00000588885 VAMP8Q9BV40 100 aa7.41□□□□□ -1.22
RFX1-204ENST00000588885 LRP1Q07954 4544 aaKnown RBP7.41□□□□□ -1.22
RFX1-204ENST00000588885 IGHV3OR16-9A0A0B4J2B5 98 aa7.4□□□□□ -1.22
RFX1-204ENST00000588885 SMIM1B2RUZ4 78 aa7.4□□□□□ -1.22
RFX1-204ENST00000588885 SPATA45Q537H7 98 aa7.4□□□□□ -1.22
RFX1-204ENST00000588885 LINC00518Q8N0U6 118 aa7.4□□□□□ -1.22
RFX1-204ENST00000588885 PKHD1L1Q86WI1 4243 aa7.39□□□□□ -1.23
RFX1-204ENST00000588885 IGKV2D-26A0A0A0MRZ7 120 aa7.39□□□□□ -1.23
RFX1-204ENST00000588885 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.39□□□□□ -1.23
RFX1-204ENST00000588885 HSBP1L1C9JCN9 74 aa7.39□□□□□ -1.23
RFX1-204ENST00000588885 H3BRM9 83 aa7.39□□□□□ -1.23
RFX1-204ENST00000588885 CHTF8P0CG12 524 aa7.39□□□□□ -1.23
RFX1-204ENST00000588885 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
RFX1-204ENST00000588885 HERVK_113P61574 105 aa7.39□□□□□ -1.23
RFX1-204ENST00000588885 FAT3Q8TDW7 4589 aa7.39□□□□□ -1.23
RFX1-204ENST00000588885 A0A087WZ39 114 aa7.38□□□□□ -1.23
RFX1-204ENST00000588885 E9PLD3 99 aa7.38□□□□□ -1.23
RFX1-204ENST00000588885 COX7A2LO14548 114 aa7.38□□□□□ -1.23
RFX1-204ENST00000588885 LINC00526Q96FQ7 95 aa7.38□□□□□ -1.23
RFX1-204ENST00000588885 TP73-AS1Q9UF72 201 aa7.38□□□□□ -1.23
RFX1-204ENST00000588885 IGHV1-58A0A0C4DH39 117 aa7.37□□□□□ -1.23
RFX1-204ENST00000588885 NMUP48645 174 aa7.37□□□□□ -1.23
RFX1-204ENST00000588885 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
RFX1-204ENST00000588885 RPL37AP61513 92 aaKnown RBP7.37□□□□□ -1.23
RFX1-204ENST00000588885 IGLV5-39A0A0G2JS06 123 aa7.36□□□□□ -1.23
RFX1-204ENST00000588885 S100A12P80511 92 aa7.36□□□□□ -1.23
RFX1-204ENST00000588885 LINC01561Q8N1V8 128 aa7.36□□□□□ -1.23
RFX1-204ENST00000588885 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
RFX1-204ENST00000588885 IGKV2-24A0A0C4DH68 120 aa7.35□□□□□ -1.23
RFX1-204ENST00000588885 LEPROTO15243 131 aa7.35□□□□□ -1.23
RFX1-204ENST00000588885 MALP21145 153 aa7.35□□□□□ -1.23
RFX1-204ENST00000588885 ORAOV1Q8WV07 137 aa7.35□□□□□ -1.23
RFX1-204ENST00000588885 A0A087WYN8 130 aa7.34□□□□□ -1.23
RFX1-204ENST00000588885 GVQW2A0A096LPI5 108 aaPredicted RBP7.34□□□□□ -1.23
RFX1-204ENST00000588885 KRTAP29-1A8MX34 341 aaPredicted RBP7.34□□□□□ -1.23
RFX1-204ENST00000588885 SPAG11BQ08648 103 aa7.34□□□□□ -1.23
RFX1-204ENST00000588885 PCP2Q8IVA1 136 aa7.34□□□□□ -1.23
RFX1-204ENST00000588885 PLEKHB2Q96CS7 222 aa7.34□□□□□ -1.23
RFX1-204ENST00000588885 PRO1933Q9H354 126 aa7.34□□□□□ -1.23
RFX1-204ENST00000588885 TOMM7Q9P0U1 55 aa7.34□□□□□ -1.23
RFX1-204ENST00000588885 J3QQQ9 107 aa7.33□□□□□ -1.24
RFX1-204ENST00000588885 LGALS3P17931 250 aaKnown RBP7.33□□□□□ -1.24
RFX1-204ENST00000588885 HNRNPA3P51991 378 aaKnown RBP7.33□□□□□ -1.24
RFX1-204ENST00000588885 CIRBPQ14011 172 aaKnown RBP7.33□□□□□ -1.24
RFX1-204ENST00000588885 SPACA4Q8TDM5 124 aa7.33□□□□□ -1.24
RFX1-204ENST00000588885 COX7B2Q8TF08 81 aa7.33□□□□□ -1.24
RFX1-204ENST00000588885 ZNF561-AS1K7EIQ3 104 aa7.32□□□□□ -1.24
RFX1-204ENST00000588885 APOMO95445 188 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms