RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 UMAD1C9J7I0 102 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 H3BPC8 53 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 J3QLW9 94 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 TCL1BO95988 128 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 IGHV3-7P01780 117 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 C1QAP02745 245 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 SAA1P0DJI8 122 aaPredicted RBP1.6□□□□□ -2.15
VPS4B-203ENST00000588323 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 CCL8P80075 99 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 WFDC2Q14508 124 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 MIAQ16674 131 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 NMSQ5H8A3 153 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 ATP11AUNQ6ZP68 121 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 C5orf38Q86SI9 138 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 CMTM2Q8TAZ6 248 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 MYOZ3Q8TDC0 251 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 DIRC1Q969H9 104 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 SMIM7Q9BQ49 75 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 CST11Q9H112 138 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 SACSQ9NZJ4 4579 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 CCDC88CQ9P219 2028 aa1.6□□□□□ -2.15
VPS4B-203ENST00000588323 HECTD4Q9Y4D8 3996 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 PLCE1Q9P212 2302 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 IGKV1-9A0A0C4DH69 117 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 MUC21A0A140T8X8 626 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 LCE6AA0A183 80 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 hADV29S1A0JD25 119 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 CRYM-AS1A6NIL9 109 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 C17orf112F2Z3M2 114 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 PIRTP0C851 137 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 RNASE2P10153 161 aaKnown RBP1.59□□□□□ -2.15
VPS4B-203ENST00000588323 CD24P25063 80 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 SSR2P43308 183 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 DYNLT1P63172 113 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 FOXF1Q12946 379 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 ZNF791Q3KP31 576 aaPredicted RBP1.59□□□□□ -2.15
VPS4B-203ENST00000588323 C18orf32Q8TCD1 76 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 CLEC2BQ92478 149 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 LY96Q9Y6Y9 160 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 MINOS1-NBL1R4GNA1 71 aa1.59□□□□□ -2.15
VPS4B-203ENST00000588323 KIAA1109Q2LD37 5005 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 TRAV1-1A0A0B4J248 108 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 TRBV7-7A0A0K0K1E9 115 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 C11orf86A6NJI1 115 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 H0YGG7 62 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 SYS1-DBNDD2H3BUS1 97 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 NDUFC1O43677 76 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 ZNF737O75373 536 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 IGLV6-57P01721 117 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 IGKV1-16P04430 117 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 ACYP1P07311 99 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 ADCYAP1P18509 176 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 RNASE4P34096 147 aaKnown RBP1.58□□□□□ -2.16
VPS4B-203ENST00000588323 EFNA4P52798 201 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 UBE2G1P62253 170 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 ELOBQ15370 118 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 KISS1Q15726 138 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 MPV17LQ2QL34 196 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 SPRNQ5BIV9 151 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 SPANXN1Q5VSR9 72 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 SBSPONQ8IVN8 264 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 SERP2Q8N6R1 65 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 MUCL1Q96DR8 90 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 NABP2Q9BQ15 211 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 NHP2Q9NX24 153 aaKnown RBP1.58□□□□□ -2.16
VPS4B-203ENST00000588323 HHLA3Q9XRX5 114 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 TIMM9Q9Y5J7 89 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 PRR14LQ5THK1 2151 aa1.58□□□□□ -2.16
VPS4B-203ENST00000588323 FXYD6-FXYD2A0A087WZ82 144 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 IGKV3D-11A0A0A0MRZ8 115 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 A0A0J9YX75 114 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 A0A1W2PNM2 257 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 B4DSR2 109 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 GNRH2O43555 120 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 INSL4Q14641 139 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 ZNF56Q15929 161 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 PSMG4Q5JS54 123 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 COMMD6Q7Z4G1 85 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 C6orf201Q7Z4U5 140 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 BAGE3Q86Y29 109 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 BAGE2Q86Y30 109 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 SPTSSBQ8NFR3 76 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 DYNLRB2Q8TF09 96 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 TVP23CQ96ET8 276 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 TRGV9Q99603 122 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 SLC50A1Q9BRV3 221 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 FXYD6Q9H0Q3 95 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 PROK2Q9HC23 129 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 MANBALQ9NQG1 85 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 GNG13Q9P2W3 67 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 ARL2-SNX15V9GYD0 113 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 HERC1Q15751 4861 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 FREM3P0C091 2139 aa1.57□□□□□ -2.16
VPS4B-203ENST00000588323 KIAA1549Q9HCM3 1950 aa1.56□□□□□ -2.16
VPS4B-203ENST00000588323 IGKV2-24A0A0C4DH68 120 aa1.56□□□□□ -2.16
VPS4B-203ENST00000588323 LOC285095A0A1B0GVY8 99 aa1.56□□□□□ -2.16
VPS4B-203ENST00000588323 A0A1W2PNN7 141 aa1.56□□□□□ -2.16
VPS4B-203ENST00000588323 CCKP06307 115 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms