RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 C2orf82Q6UX34 121 aa12.07□□□□□ -0.48
CIRBP-217ENST00000588230 HNRNPA3P51991 378 aaKnown RBP12.06□□□□□ -0.48
CIRBP-217ENST00000588230 NDUFA6P56556 154 aa12.06□□□□□ -0.48
CIRBP-217ENST00000588230 CKS1BP61024 79 aa12.06□□□□□ -0.48
CIRBP-217ENST00000588230 TRBV30A0A0K0K1B3 111 aa12.05□□□□□ -0.48
CIRBP-217ENST00000588230 Q8IZM0 81 aa12.05□□□□□ -0.48
CIRBP-217ENST00000588230 TLX1NBP0CAT3 122 aa12.04□□□□□ -0.48
CIRBP-217ENST00000588230 IGLV5-45A0A087WSX0 123 aa12.03□□□□□ -0.48
CIRBP-217ENST00000588230 ATP5LO75964 103 aa12.03□□□□□ -0.48
CIRBP-217ENST00000588230 C9orf116Q5BN46 136 aaPredicted RBP12.03□□□□□ -0.48
CIRBP-217ENST00000588230 PDZD11Q5EBL8 140 aa12.03□□□□□ -0.48
CIRBP-217ENST00000588230 A0A1W2PNN7 141 aa12.02□□□□□ -0.49
CIRBP-217ENST00000588230 GAGE2EQ4V326 116 aa12.02□□□□□ -0.49
CIRBP-217ENST00000588230 Q6ZRP5 223 aa12.02□□□□□ -0.49
CIRBP-217ENST00000588230 CHCHD1Q96BP2 118 aaKnown RBP12.02□□□□□ -0.49
CIRBP-217ENST00000588230 GAGE2DQ9UEU5 116 aa12.02□□□□□ -0.49
CIRBP-217ENST00000588230 SMIM1B2RUZ4 78 aa12.01□□□□□ -0.49
CIRBP-217ENST00000588230 J3QL48 77 aa12.01□□□□□ -0.49
CIRBP-217ENST00000588230 TRGC2P03986 189 aa12.01□□□□□ -0.49
CIRBP-217ENST00000588230 H3BRM9 83 aa12□□□□□ -0.49
CIRBP-217ENST00000588230 BAGE3Q86Y29 109 aa12□□□□□ -0.49
CIRBP-217ENST00000588230 NDUFC2-KCTD14E9PQ53 114 aa11.99□□□□□ -0.49
CIRBP-217ENST00000588230 SPINK8P0C7L1 97 aa11.99□□□□□ -0.49
CIRBP-217ENST00000588230 IGLC3P0DOY3 106 aa11.99□□□□□ -0.49
CIRBP-217ENST00000588230 F8VRH5 84 aa11.98□□□□□ -0.49
CIRBP-217ENST00000588230 CXCL5P42830 114 aa11.98□□□□□ -0.49
CIRBP-217ENST00000588230 COX7B2Q8TF08 81 aa11.98□□□□□ -0.49
CIRBP-217ENST00000588230 HSBP1O75506 76 aa11.97□□□□□ -0.49
CIRBP-217ENST00000588230 PRR3P79522 188 aaKnown RBP11.97□□□□□ -0.49
CIRBP-217ENST00000588230 COLCA2A8K830 154 aa11.96□□□□□ -0.49
CIRBP-217ENST00000588230 FAM168BA1KXE4 195 aa11.95□□□□□ -0.5
CIRBP-217ENST00000588230 OXTP01178 125 aa11.95□□□□□ -0.5
CIRBP-217ENST00000588230 PHF5AQ7RTV0 110 aaKnown RBP11.94□□□□□ -0.5
CIRBP-217ENST00000588230 FAM19A5Q7Z5A7 132 aaPredicted RBP11.94□□□□□ -0.5
CIRBP-217ENST00000588230 ZNF22P17026 224 aaPredicted RBP11.93□□□□□ -0.5
CIRBP-217ENST00000588230 FAM19A2Q8N3H0 131 aa11.93□□□□□ -0.5
CIRBP-217ENST00000588230 IFI27L1Q96BM0 104 aa11.93□□□□□ -0.5
CIRBP-217ENST00000588230 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
CIRBP-217ENST00000588230 C11orf86A6NJI1 115 aa11.91□□□□□ -0.5
CIRBP-217ENST00000588230 C9orf129Q5T035 196 aaKnown RBP11.91□□□□□ -0.5
CIRBP-217ENST00000588230 TMEM170BQ5T4T1 132 aa11.91□□□□□ -0.5
CIRBP-217ENST00000588230 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.5
CIRBP-217ENST00000588230 SERF1AO75920 110 aa11.9□□□□□ -0.5
CIRBP-217ENST00000588230 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
CIRBP-217ENST00000588230 XAGE1AQ9HD64 81 aa11.89□□□□□ -0.51
CIRBP-217ENST00000588230 HMCN2Q8NDA2 5059 aa11.88□□□□□ -0.51
CIRBP-217ENST00000588230 M0QXV9 152 aa11.88□□□□□ -0.51
CIRBP-217ENST00000588230 SCO1O75880 301 aa11.88□□□□□ -0.51
CIRBP-217ENST00000588230 PSORS1C2Q9UIG4 136 aa11.88□□□□□ -0.51
CIRBP-217ENST00000588230 KRTAP7-1Q8IUC3 87 aa11.87□□□□□ -0.51
CIRBP-217ENST00000588230 LEPROTL1O95214 131 aa11.86□□□□□ -0.51
CIRBP-217ENST00000588230 LINC00310P59036 64 aa11.86□□□□□ -0.51
CIRBP-217ENST00000588230 MT1HL1P0DM35 61 aa11.85□□□□□ -0.51
CIRBP-217ENST00000588230 SPINK6Q6UWN8 80 aa11.85□□□□□ -0.51
CIRBP-217ENST00000588230 TNXBP22105 4242 aa11.85□□□□□ -0.51
CIRBP-217ENST00000588230 UBE2BP63146 152 aa11.84□□□□□ -0.51
CIRBP-217ENST00000588230 C1orf137Q5JT78 98 aa11.84□□□□□ -0.51
CIRBP-217ENST00000588230 H0Y8G0 127 aa11.83□□□□□ -0.52
CIRBP-217ENST00000588230 NUPR1O60356 82 aa11.83□□□□□ -0.52
CIRBP-217ENST00000588230 SERTAD4-AS1Q5TG53 156 aa11.83□□□□□ -0.52
CIRBP-217ENST00000588230 SRSF9Q13242 221 aaKnown RBP eCLIP11.82□□□□□ -0.52
CIRBP-217ENST00000588230 HSPB8Q9UJY1 196 aa11.82□□□□□ -0.52
CIRBP-217ENST00000588230 TMEM223A0PJW6 202 aa11.81□□□□□ -0.52
CIRBP-217ENST00000588230 FABP4P15090 132 aa11.81□□□□□ -0.52
CIRBP-217ENST00000588230 PFN2P35080 140 aa11.81□□□□□ -0.52
CIRBP-217ENST00000588230 KRTAP11-1Q8IUC1 163 aa11.81□□□□□ -0.52
CIRBP-217ENST00000588230 C22orf24Q9Y442 160 aa11.81□□□□□ -0.52
CIRBP-217ENST00000588230 LBHQ53QV2 105 aaPredicted RBP11.8□□□□□ -0.52
CIRBP-217ENST00000588230 SFTA2Q6UW10 78 aa11.8□□□□□ -0.52
CIRBP-217ENST00000588230 ZNF625Q96I27 306 aaPredicted RBP11.8□□□□□ -0.52
CIRBP-217ENST00000588230 ODF1Q14990 250 aa11.79□□□□□ -0.52
CIRBP-217ENST00000588230 ERG28Q9UKR5 140 aa11.79□□□□□ -0.52
CIRBP-217ENST00000588230 REG3GQ6UW15 175 aa11.78□□□□□ -0.52
CIRBP-217ENST00000588230 HIST1H2BKO60814 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 IGLV7-43P04211 117 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST1H2BJP06899 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST1H2BOP23527 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST1H2BBP33778 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST1H2BDP58876 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST1H2BCP62807 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST2H2BEQ16778 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST1H2BHQ93079 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST1H2BNQ99877 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 HIST1H2BMQ99879 126 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 TP73-AS1Q9UF72 201 aa11.77□□□□□ -0.53
CIRBP-217ENST00000588230 COX17Q14061 63 aa11.76□□□□□ -0.53
CIRBP-217ENST00000588230 MRPL55Q7Z7F7 128 aaKnown RBP11.76□□□□□ -0.53
CIRBP-217ENST00000588230 PLA2G2DQ9UNK4 145 aa11.76□□□□□ -0.53
CIRBP-217ENST00000588230 PLNP26678 52 aa11.74□□□□□ -0.53
CIRBP-217ENST00000588230 LINC01600Q96MT4 127 aa11.74□□□□□ -0.53
CIRBP-217ENST00000588230 NKAPP1Q8N9T2 125 aa11.73□□□□□ -0.53
CIRBP-217ENST00000588230 MAP1LC3CQ9BXW4 147 aa11.73□□□□□ -0.53
CIRBP-217ENST00000588230 SND1-IT1Q9HBX3 110 aa11.73□□□□□ -0.53
CIRBP-217ENST00000588230 DPM2O94777 84 aa11.72□□□□□ -0.53
CIRBP-217ENST00000588230 LINC00158P58513 81 aa11.72□□□□□ -0.53
CIRBP-217ENST00000588230 DIRC1Q969H9 104 aa11.72□□□□□ -0.53
CIRBP-217ENST00000588230 IGLV5-37A0A075B6J1 123 aa11.71□□□□□ -0.53
CIRBP-217ENST00000588230 LINC00167Q96N53 147 aa11.71□□□□□ -0.53
CIRBP-217ENST00000588230 PMCHL2Q9BQD1 86 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms