RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 C6orf223Q8N319 242 aa7.46□□□□□ -1.22
VMP1-207ENST00000588131 KRTAP17-1Q9BYP8 105 aa7.46□□□□□ -1.22
VMP1-207ENST00000588131 UQCR10Q9UDW1 63 aa7.46□□□□□ -1.22
VMP1-207ENST00000588131 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.22
VMP1-207ENST00000588131 KMT2AQ03164 3969 aa7.46□□□□□ -1.22
VMP1-207ENST00000588131 HYDINQ4G0P3 5121 aa7.45□□□□□ -1.22
VMP1-207ENST00000588131 USP17L23D6RBM5 183 aa7.45□□□□□ -1.22
VMP1-207ENST00000588131 TSTD3H0UI37 97 aa7.45□□□□□ -1.22
VMP1-207ENST00000588131 LECT2O14960 151 aa7.45□□□□□ -1.22
VMP1-207ENST00000588131 NDUFA1O15239 70 aa7.45□□□□□ -1.22
VMP1-207ENST00000588131 DLEU1O43261 78 aa7.45□□□□□ -1.22
VMP1-207ENST00000588131 PRSS2P07478 247 aa7.45□□□□□ -1.22
VMP1-207ENST00000588131 ZNF625Q96I27 306 aaPredicted RBP7.45□□□□□ -1.22
VMP1-207ENST00000588131 GVQW2A0A096LPI5 108 aaPredicted RBP7.44□□□□□ -1.22
VMP1-207ENST00000588131 PSCAO43653 123 aa7.44□□□□□ -1.22
VMP1-207ENST00000588131 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
VMP1-207ENST00000588131 XP32Q5T750 250 aa7.44□□□□□ -1.22
VMP1-207ENST00000588131 CFAP161Q6P656 301 aa7.44□□□□□ -1.22
VMP1-207ENST00000588131 C2orf82Q6UX34 121 aa7.44□□□□□ -1.22
VMP1-207ENST00000588131 C2orf91Q6ZV80 131 aa7.44□□□□□ -1.22
VMP1-207ENST00000588131 MIEN1Q9BRT3 115 aa7.44□□□□□ -1.22
VMP1-207ENST00000588131 A0A0J9YXY3 114 aa7.43□□□□□ -1.22
VMP1-207ENST00000588131 LCE6AA0A183 80 aa7.43□□□□□ -1.22
VMP1-207ENST00000588131 NTN5Q8WTR8 489 aaPredicted RBP7.43□□□□□ -1.22
VMP1-207ENST00000588131 BIRC6Q9NR09 4857 aa7.42□□□□□ -1.22
VMP1-207ENST00000588131 ZNF561-AS1K7EIQ3 104 aa7.42□□□□□ -1.22
VMP1-207ENST00000588131 CKS1BP61024 79 aa7.42□□□□□ -1.22
VMP1-207ENST00000588131 C10orf25Q5T742 122 aa7.42□□□□□ -1.22
VMP1-207ENST00000588131 C1orf134Q5TEV5 83 aa7.42□□□□□ -1.22
VMP1-207ENST00000588131 DNAH17Q9UFH2 4485 aa7.42□□□□□ -1.22
VMP1-207ENST00000588131 LRCOL1A6NCL2 159 aa7.41□□□□□ -1.22
VMP1-207ENST00000588131 PCP4L1A6NKN8 68 aa7.41□□□□□ -1.22
VMP1-207ENST00000588131 CXCL5P42830 114 aa7.41□□□□□ -1.22
VMP1-207ENST00000588131 HNRNPA3P51991 378 aaKnown RBP7.41□□□□□ -1.22
VMP1-207ENST00000588131 UNQ6190/PRO20217Q6UXQ8 127 aa7.41□□□□□ -1.22
VMP1-207ENST00000588131 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
VMP1-207ENST00000588131 SLPIP03973 132 aa7.4□□□□□ -1.22
VMP1-207ENST00000588131 HERV-K104P63124 156 aa7.4□□□□□ -1.22
VMP1-207ENST00000588131 C2orf48Q96LS8 159 aa7.4□□□□□ -1.22
VMP1-207ENST00000588131 CAMK2N2Q96S95 79 aa7.4□□□□□ -1.22
VMP1-207ENST00000588131 EPPK1P58107 5090 aaKnown RBP7.4□□□□□ -1.23
VMP1-207ENST00000588131 DDTP30046 118 aa7.39□□□□□ -1.23
VMP1-207ENST00000588131 TNP2Q05952 138 aa7.39□□□□□ -1.23
VMP1-207ENST00000588131 MEIG1Q5JSS6 88 aa7.39□□□□□ -1.23
VMP1-207ENST00000588131 Q6ZRU5 148 aa7.39□□□□□ -1.23
VMP1-207ENST00000588131 LITAFQ99732 161 aa7.39□□□□□ -1.23
VMP1-207ENST00000588131 HIGD1BQ9P298 99 aa7.39□□□□□ -1.23
VMP1-207ENST00000588131 C6orf48Q9UBA6 75 aa7.39□□□□□ -1.23
VMP1-207ENST00000588131 A0A0U1RRA0 63 aa7.38□□□□□ -1.23
VMP1-207ENST00000588131 SMIM13P0DJ93 91 aa7.38□□□□□ -1.23
VMP1-207ENST00000588131 C9orf116Q5BN46 136 aaPredicted RBP7.38□□□□□ -1.23
VMP1-207ENST00000588131 ADAMTSL4-AS1Q5T5F5 129 aa7.38□□□□□ -1.23
VMP1-207ENST00000588131 SFTA2Q6UW10 78 aa7.38□□□□□ -1.23
VMP1-207ENST00000588131 A0A087WTM6 91 aa7.37□□□□□ -1.23
VMP1-207ENST00000588131 RTL8CO15255 209 aa7.37□□□□□ -1.23
VMP1-207ENST00000588131 CTAG1AP78358 180 aa7.37□□□□□ -1.23
VMP1-207ENST00000588131 SYCNQ0VAF6 134 aa7.37□□□□□ -1.23
VMP1-207ENST00000588131 ERG28Q9UKR5 140 aa7.37□□□□□ -1.23
VMP1-207ENST00000588131 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.36□□□□□ -1.23
VMP1-207ENST00000588131 F8WDY8 70 aa7.36□□□□□ -1.23
VMP1-207ENST00000588131 TIMM17BO60830 172 aa7.36□□□□□ -1.23
VMP1-207ENST00000588131 PFN2P35080 140 aa7.36□□□□□ -1.23
VMP1-207ENST00000588131 C14orf177Q52M58 125 aa7.36□□□□□ -1.23
VMP1-207ENST00000588131 DAND5Q8N907 189 aa7.36□□□□□ -1.23
VMP1-207ENST00000588131 CARD19Q96LW7 228 aa7.36□□□□□ -1.23
VMP1-207ENST00000588131 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
VMP1-207ENST00000588131 TRBV30A0A0K0K1B3 111 aa7.35□□□□□ -1.23
VMP1-207ENST00000588131 TMEM238C9JI98 176 aa7.35□□□□□ -1.23
VMP1-207ENST00000588131 LINC00158P58513 81 aa7.35□□□□□ -1.23
VMP1-207ENST00000588131 Q8N814 137 aa7.35□□□□□ -1.23
VMP1-207ENST00000588131 FRAS1Q86XX4 4008 aa7.35□□□□□ -1.23
VMP1-207ENST00000588131 RYR2Q92736 4967 aa7.35□□□□□ -1.23
VMP1-207ENST00000588131 NPC2P61916 151 aa7.34□□□□□ -1.23
VMP1-207ENST00000588131 CIRBPQ14011 172 aaKnown RBP7.34□□□□□ -1.23
VMP1-207ENST00000588131 MIR7-3HGQ8N6C7 128 aa7.34□□□□□ -1.23
VMP1-207ENST00000588131 HIST1H4GQ99525 98 aa7.34□□□□□ -1.23
VMP1-207ENST00000588131 SPANXDQ9BXN6 97 aa7.34□□□□□ -1.23
VMP1-207ENST00000588131 SPANXCQ9NY87 97 aa7.34□□□□□ -1.23
VMP1-207ENST00000588131 LINC00587B1AMM8 73 aa7.33□□□□□ -1.24
VMP1-207ENST00000588131 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
VMP1-207ENST00000588131 CNBPP62633 177 aaKnown RBP7.33□□□□□ -1.24
VMP1-207ENST00000588131 HSD52Q0P140 79 aa7.33□□□□□ -1.24
VMP1-207ENST00000588131 SRSF9Q13242 221 aaKnown RBP eCLIP7.33□□□□□ -1.24
VMP1-207ENST00000588131 RNF151Q2KHN1 245 aa7.33□□□□□ -1.24
VMP1-207ENST00000588131 FAT2Q9NYQ8 4349 aa7.33□□□□□ -1.24
VMP1-207ENST00000588131 FUSP35637 526 aaKnown RBP eCLIP7.32□□□□□ -1.24
VMP1-207ENST00000588131 COX17Q14061 63 aa7.32□□□□□ -1.24
VMP1-207ENST00000588131 TAL2Q16559 108 aa7.32□□□□□ -1.24
VMP1-207ENST00000588131 SOSTDC1Q6X4U4 206 aa7.32□□□□□ -1.24
VMP1-207ENST00000588131 GCSHP23434 173 aa7.31□□□□□ -1.24
VMP1-207ENST00000588131 HINT1P49773 126 aaPredicted RBP7.31□□□□□ -1.24
VMP1-207ENST00000588131 MUSTN1Q8IVN3 82 aa7.31□□□□□ -1.24
VMP1-207ENST00000588131 CEND1Q8N111 149 aa7.31□□□□□ -1.24
VMP1-207ENST00000588131 LINC00308Q8TCZ7 52 aa7.31□□□□□ -1.24
VMP1-207ENST00000588131 DNAH11Q96DT5 4516 aa7.31□□□□□ -1.24
VMP1-207ENST00000588131 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.3□□□□□ -1.24
VMP1-207ENST00000588131 NDUFC2-KCTD14E9PQ53 114 aa7.3□□□□□ -1.24
VMP1-207ENST00000588131 FXYD2P54710 66 aa7.3□□□□□ -1.24
VMP1-207ENST00000588131 BVES-AS1Q5T3Y7 98 aa7.3□□□□□ -1.24
VMP1-207ENST00000588131 Q6ZRP5 223 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms