RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 MTORP42345 2549 aa13□□□□□ -0.33
DDX39A-206ENST00000587730 TLN2Q9Y4G6 2542 aa13□□□□□ -0.33
DDX39A-206ENST00000587730 Q8IZM0 81 aa12.99□□□□□ -0.33
DDX39A-206ENST00000587730 SETD2Q9BYW2 2564 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-206ENST00000587730 LY6G6DO95868 133 aa12.99□□□□□ -0.33
DDX39A-206ENST00000587730 C6orf226Q5I0X4 101 aa12.99□□□□□ -0.33
DDX39A-206ENST00000587730 TMEM126AQ9H061 195 aa12.99□□□□□ -0.33
DDX39A-206ENST00000587730 IGKV3OR2-268A0A0C4DH90 116 aa12.98□□□□□ -0.33
DDX39A-206ENST00000587730 A0A1B0GX51 115 aa12.98□□□□□ -0.33
DDX39A-206ENST00000587730 SMIM9A6NGZ8 99 aa12.98□□□□□ -0.33
DDX39A-206ENST00000587730 OBSCN-AS1Q96MR7 158 aa12.98□□□□□ -0.33
DDX39A-206ENST00000587730 FAM236AA0A1B0GUQ0 79 aa12.97□□□□□ -0.33
DDX39A-206ENST00000587730 FAM236BA0A1B0GV22 79 aa12.97□□□□□ -0.33
DDX39A-206ENST00000587730 PAX4O43316 350 aa12.97□□□□□ -0.33
DDX39A-206ENST00000587730 GAGE2AQ6NT46 116 aa12.97□□□□□ -0.33
DDX39A-206ENST00000587730 SMCR5Q8TEV8 140 aa12.97□□□□□ -0.33
DDX39A-206ENST00000587730 C5orf38Q86SI9 138 aa12.97□□□□□ -0.33
DDX39A-206ENST00000587730 WFDC10AQ9H1F0 79 aa12.97□□□□□ -0.33
DDX39A-206ENST00000587730 Q9HAA7 133 aa12.97□□□□□ -0.33
DDX39A-206ENST00000587730 A0A087WYN8 130 aa12.94□□□□□ -0.34
DDX39A-206ENST00000587730 PFN2P35080 140 aa12.94□□□□□ -0.34
DDX39A-206ENST00000587730 COX17Q14061 63 aa12.94□□□□□ -0.34
DDX39A-206ENST00000587730 PRO0255Q9UI72 69 aa12.93□□□□□ -0.34
DDX39A-206ENST00000587730 NDUFC2O95298 119 aa12.92□□□□□ -0.34
DDX39A-206ENST00000587730 GYPEP15421 78 aa12.92□□□□□ -0.34
DDX39A-206ENST00000587730 OR13C6PQ8NH95 151 aa12.92□□□□□ -0.34
DDX39A-206ENST00000587730 ORMDL1Q9P0S3 153 aa12.92□□□□□ -0.34
DDX39A-206ENST00000587730 KLK5Q9Y337 293 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-206ENST00000587730 UQCRQO14949 82 aa12.91□□□□□ -0.34
DDX39A-206ENST00000587730 DEFB130BP0DP73 79 aa12.91□□□□□ -0.34
DDX39A-206ENST00000587730 DEFB130AP0DP74 79 aa12.91□□□□□ -0.34
DDX39A-206ENST00000587730 ANK3Q12955 4377 aaKnown RBP12.9□□□□□ -0.34
DDX39A-206ENST00000587730 LECT2O14960 151 aa12.9□□□□□ -0.34
DDX39A-206ENST00000587730 MUC7Q8TAX7 377 aa12.9□□□□□ -0.34
DDX39A-206ENST00000587730 HILS1P60008 231 aa12.9□□□□□ -0.34
DDX39A-206ENST00000587730 Q6JHZ5 121 aa12.9□□□□□ -0.34
DDX39A-206ENST00000587730 SMR3AQ99954 134 aa12.9□□□□□ -0.34
DDX39A-206ENST00000587730 SONP18583 2426 aaKnown RBP12.9□□□□□ -0.34
DDX39A-206ENST00000587730 NF1P21359 2839 aa12.89□□□□□ -0.35
DDX39A-206ENST00000587730 LYRM9A8MSI8 78 aa12.89□□□□□ -0.35
DDX39A-206ENST00000587730 C3orf22Q8N5N4 141 aa12.89□□□□□ -0.35
DDX39A-206ENST00000587730 LINC00167Q96N53 147 aa12.89□□□□□ -0.35
DDX39A-206ENST00000587730 ATOX1O00244 68 aa12.88□□□□□ -0.35
DDX39A-206ENST00000587730 XCL1P47992 114 aa12.88□□□□□ -0.35
DDX39A-206ENST00000587730 JMJD7-PLA2G4BH0Y9G9 81 aa12.88□□□□□ -0.35
DDX39A-206ENST00000587730 KRTAP1-1Q07627 177 aa12.88□□□□□ -0.35
DDX39A-206ENST00000587730 CD164L2Q6UWJ8 174 aa12.88□□□□□ -0.35
DDX39A-206ENST00000587730 S100A7L2Q5SY68 101 aa12.87□□□□□ -0.35
DDX39A-206ENST00000587730 HIST1H4AP62805 103 aaKnown RBP12.86□□□□□ -0.35
DDX39A-206ENST00000587730 LINC00526Q96FQ7 95 aa12.86□□□□□ -0.35
DDX39A-206ENST00000587730 IGHV4-28A0A0C4DH34 117 aa12.85□□□□□ -0.35
DDX39A-206ENST00000587730 C14orf132Q9NPU4 83 aa12.85□□□□□ -0.35
DDX39A-206ENST00000587730 CUBNO60494 3623 aa12.85□□□□□ -0.35
DDX39A-206ENST00000587730 X6R8D5 127 aa12.84□□□□□ -0.35
DDX39A-206ENST00000587730 TMEM256-PLSCR3K7ERE1 68 aa12.83□□□□□ -0.35
DDX39A-206ENST00000587730 C9orf153Q5TBE3 101 aa12.83□□□□□ -0.35
DDX39A-206ENST00000587730 COX7CP15954 63 aa12.82□□□□□ -0.36
DDX39A-206ENST00000587730 ATP5EP2Q5VTU8 51 aa12.82□□□□□ -0.36
DDX39A-206ENST00000587730 LINC00482Q8N8I6 264 aa12.82□□□□□ -0.36
DDX39A-206ENST00000587730 CCKP06307 115 aa12.81□□□□□ -0.36
DDX39A-206ENST00000587730 C11orf68Q9H3H3 251 aaKnown RBP12.81□□□□□ -0.36
DDX39A-206ENST00000587730 KIAA0087Q14695 138 aa12.8□□□□□ -0.36
DDX39A-206ENST00000587730 Q8N814 137 aa12.8□□□□□ -0.36
DDX39A-206ENST00000587730 NIPBLQ6KC79 2804 aaeCLIP12.8□□□□□ -0.362e-7■□□□□ 8.1
DDX39A-206ENST00000587730 RPL18AQ02543 176 aaKnown RBP12.79□□□□□ -0.36
DDX39A-206ENST00000587730 CHCHD10Q8WYQ3 142 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-206ENST00000587730 HIVEP2P31629 2446 aa12.79□□□□□ -0.36
DDX39A-206ENST00000587730 LINC00846Q9NV44 126 aa12.78□□□□□ -0.36
DDX39A-206ENST00000587730 H3BQ85 93 aa12.78□□□□□ -0.36
DDX39A-206ENST00000587730 NCR3O14931 201 aa12.78□□□□□ -0.36
DDX39A-206ENST00000587730 LINC00269Q8N2A0 174 aa12.78□□□□□ -0.36
DDX39A-206ENST00000587730 NSD1Q96L73 2696 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-206ENST00000587730 APOC4P55056 127 aa12.76□□□□□ -0.37
DDX39A-206ENST00000587730 NANOS2P60321 138 aaKnown RBP12.76□□□□□ -0.37
DDX39A-206ENST00000587730 REG3AQ06141 175 aa12.76□□□□□ -0.37
DDX39A-206ENST00000587730 C9orf129Q5T035 196 aaKnown RBP12.76□□□□□ -0.37
DDX39A-206ENST00000587730 C9orf66Q5T8R8 295 aa12.76□□□□□ -0.37
DDX39A-206ENST00000587730 WNK1Q9H4A3 2382 aa12.76□□□□□ -0.37
DDX39A-206ENST00000587730 CRYGAP11844 174 aa12.76□□□□□ -0.37
DDX39A-206ENST00000587730 ANGP03950 147 aaKnown RBP12.74□□□□□ -0.37
DDX39A-206ENST00000587730 KRTAP21-3Q3LHN1 58 aa12.74□□□□□ -0.37
DDX39A-206ENST00000587730 CLPSL2Q6UWE3 100 aa12.74□□□□□ -0.37
DDX39A-206ENST00000587730 SMIM20Q8N5G0 67 aa12.74□□□□□ -0.37
DDX39A-206ENST00000587730 SLPIP03973 132 aa12.74□□□□□ -0.37
DDX39A-206ENST00000587730 FN1P02751 2386 aaKnown RBP12.73□□□□□ -0.37
DDX39A-206ENST00000587730 DAD1P61803 113 aa12.72□□□□□ -0.37
DDX39A-206ENST00000587730 C2orf48Q96LS8 159 aa12.72□□□□□ -0.37
DDX39A-206ENST00000587730 NOTCH3Q9UM47 2321 aa12.72□□□□□ -0.37
DDX39A-206ENST00000587730 INAFM1C9JVW0 142 aa12.71□□□□□ -0.38
DDX39A-206ENST00000587730 TRBV10-3A0A0K0K1G6 114 aa12.7□□□□□ -0.38
DDX39A-206ENST00000587730 MIFP14174 115 aa12.7□□□□□ -0.38
DDX39A-206ENST00000587730 SERP2Q8N6R1 65 aa12.7□□□□□ -0.38
DDX39A-206ENST00000587730 A0A096LPF7 62 aa12.69□□□□□ -0.38
DDX39A-206ENST00000587730 IGKV3D-7A0A0C4DH55 119 aa12.69□□□□□ -0.38
DDX39A-206ENST00000587730 A0A0J9YWU9 116 aa12.69□□□□□ -0.38
DDX39A-206ENST00000587730 IGHV4-30-4P0DP06 118 aa12.69□□□□□ -0.38
DDX39A-206ENST00000587730 LELP1Q5T871 98 aa12.69□□□□□ -0.38
DDX39A-206ENST00000587730 LINC00575Q6W349 94 aa12.69□□□□□ -0.38
DDX39A-206ENST00000587730 GVQW2A0A096LPI5 108 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-206ENST00000587730 GHRHP01286 108 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms