RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 TNP2Q05952 138 aa9.82□□□□□ -0.84
NFIX-208ENST00000587260 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
NFIX-208ENST00000587260 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
NFIX-208ENST00000587260 MIEN1Q9BRT3 115 aa9.82□□□□□ -0.84
NFIX-208ENST00000587260 TOMM7Q9P0U1 55 aa9.82□□□□□ -0.84
NFIX-208ENST00000587260 GVQW2A0A096LPI5 108 aaPredicted RBP9.82□□□□□ -0.84
NFIX-208ENST00000587260 PRSS2P07478 247 aa9.82□□□□□ -0.84
NFIX-208ENST00000587260 CXCL5P42830 114 aa9.82□□□□□ -0.84
NFIX-208ENST00000587260 HIGD2BQ4VC39 106 aa9.82□□□□□ -0.84
NFIX-208ENST00000587260 LRCOL1A6NCL2 159 aa9.81□□□□□ -0.84
NFIX-208ENST00000587260 F8WDY8 70 aa9.81□□□□□ -0.84
NFIX-208ENST00000587260 SPAG11BQ08648 103 aa9.81□□□□□ -0.84
NFIX-208ENST00000587260 A0A087WTM6 91 aa9.8□□□□□ -0.84
NFIX-208ENST00000587260 HERV-K104P63124 156 aa9.8□□□□□ -0.84
NFIX-208ENST00000587260 NTN5Q8WTR8 489 aaPredicted RBP9.8□□□□□ -0.84
NFIX-208ENST00000587260 C2orf48Q96LS8 159 aa9.8□□□□□ -0.84
NFIX-208ENST00000587260 DNAH17Q9UFH2 4485 aa9.79□□□□□ -0.84
NFIX-208ENST00000587260 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
NFIX-208ENST00000587260 LINC00526Q96FQ7 95 aa9.79□□□□□ -0.84
NFIX-208ENST00000587260 HIGD1BQ9P298 99 aa9.78□□□□□ -0.84
NFIX-208ENST00000587260 TP73-AS1Q9UF72 201 aa9.78□□□□□ -0.84
NFIX-208ENST00000587260 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.77□□□□□ -0.84
NFIX-208ENST00000587260 A0A0J9YXY3 114 aa9.77□□□□□ -0.84
NFIX-208ENST00000587260 CKS1BP61024 79 aa9.77□□□□□ -0.84
NFIX-208ENST00000587260 C2orf82Q6UX34 121 aa9.77□□□□□ -0.85
NFIX-208ENST00000587260 C2orf91Q6ZV80 131 aa9.77□□□□□ -0.85
NFIX-208ENST00000587260 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
NFIX-208ENST00000587260 SCGB1D4Q6XE38 83 aa9.76□□□□□ -0.85
NFIX-208ENST00000587260 Q8N814 137 aa9.76□□□□□ -0.85
NFIX-208ENST00000587260 TIMM17BO60830 172 aa9.75□□□□□ -0.85
NFIX-208ENST00000587260 FAT2Q9NYQ8 4349 aa9.75□□□□□ -0.85
NFIX-208ENST00000587260 LINC00587B1AMM8 73 aa9.74□□□□□ -0.85
NFIX-208ENST00000587260 EREGO14944 169 aa9.74□□□□□ -0.85
NFIX-208ENST00000587260 DDTP30046 118 aa9.74□□□□□ -0.85
NFIX-208ENST00000587260 FUSP35637 526 aaKnown RBP eCLIP9.74□□□□□ -0.85
NFIX-208ENST00000587260 UNQ6190/PRO20217Q6UXQ8 127 aa9.74□□□□□ -0.85
NFIX-208ENST00000587260 LINC00336Q6ZUF6 198 aa9.74□□□□□ -0.85
NFIX-208ENST00000587260 TRBV30A0A0K0K1B3 111 aa9.73□□□□□ -0.85
NFIX-208ENST00000587260 HNRNPA3P51991 378 aaKnown RBP9.73□□□□□ -0.85
NFIX-208ENST00000587260 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
NFIX-208ENST00000587260 CAMK2N2Q96S95 79 aa9.73□□□□□ -0.85
NFIX-208ENST00000587260 LITAFQ99732 161 aa9.73□□□□□ -0.85
NFIX-208ENST00000587260 EPPK1P58107 5090 aaKnown RBP9.73□□□□□ -0.85
NFIX-208ENST00000587260 CIRBPQ14011 172 aaKnown RBP9.72□□□□□ -0.85
NFIX-208ENST00000587260 COX17Q14061 63 aa9.72□□□□□ -0.85
NFIX-208ENST00000587260 SPANXB1Q9NS25 103 aaPredicted RBP9.72□□□□□ -0.85
NFIX-208ENST00000587260 TMEM238C9JI98 176 aa9.72□□□□□ -0.85
NFIX-208ENST00000587260 SLPIP03973 132 aa9.72□□□□□ -0.85
NFIX-208ENST00000587260 SYCNQ0VAF6 134 aa9.72□□□□□ -0.85
NFIX-208ENST00000587260 RNF151Q2KHN1 245 aa9.72□□□□□ -0.85
NFIX-208ENST00000587260 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
NFIX-208ENST00000587260 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.86
NFIX-208ENST00000587260 Q6ZRU5 148 aa9.71□□□□□ -0.86
NFIX-208ENST00000587260 C6orf48Q9UBA6 75 aa9.71□□□□□ -0.86
NFIX-208ENST00000587260 MEIG1Q5JSS6 88 aa9.7□□□□□ -0.86
NFIX-208ENST00000587260 Q6ZVH6 145 aa9.7□□□□□ -0.86
NFIX-208ENST00000587260 SMIM13P0DJ93 91 aa9.69□□□□□ -0.86
NFIX-208ENST00000587260 KRTAP10-2P60368 255 aa9.69□□□□□ -0.86
NFIX-208ENST00000587260 TAL2Q16559 108 aa9.69□□□□□ -0.86
NFIX-208ENST00000587260 ADAMTSL4-AS1Q5T5F5 129 aa9.69□□□□□ -0.86
NFIX-208ENST00000587260 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
NFIX-208ENST00000587260 SPANXCQ9NY87 97 aa9.69□□□□□ -0.86
NFIX-208ENST00000587260 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
NFIX-208ENST00000587260 PTTG1IPP53801 180 aa9.67□□□□□ -0.86
NFIX-208ENST00000587260 CTAG1AP78358 180 aa9.67□□□□□ -0.86
NFIX-208ENST00000587260 C9orf116Q5BN46 136 aaPredicted RBP9.67□□□□□ -0.86
NFIX-208ENST00000587260 PKD1P98161 4303 aa9.67□□□□□ -0.86
NFIX-208ENST00000587260 IGLV5-52A0A0A0MRZ9 124 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 PCP4L1A6NKN8 68 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 PFN2P35080 140 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 LINC00158P58513 81 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 HSD52Q0P140 79 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 SRSF9Q13242 221 aaKnown RBP eCLIP9.66□□□□□ -0.86
NFIX-208ENST00000587260 LINC01620Q4KN68 170 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 PPDPFQ9H3Y8 114 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 DNAH11Q96DT5 4516 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.66□□□□□ -0.86
NFIX-208ENST00000587260 TLX1NBP0CAT3 122 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 IFITM1P13164 125 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 HIST1H4GQ99525 98 aa9.66□□□□□ -0.86
NFIX-208ENST00000587260 A0A1B0GVY2 172 aa9.65□□□□□ -0.86
NFIX-208ENST00000587260 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.86
NFIX-208ENST00000587260 LOC107984156A0A0G2JMH3 177 aa9.64□□□□□ -0.87
NFIX-208ENST00000587260 A0A0U1RRA0 63 aa9.64□□□□□ -0.87
NFIX-208ENST00000587260 NDUFC2-KCTD14E9PQ53 114 aa9.64□□□□□ -0.87
NFIX-208ENST00000587260 ARL17AQ8IVW1 177 aa9.64□□□□□ -0.87
NFIX-208ENST00000587260 CEND1Q8N111 149 aa9.63□□□□□ -0.87
NFIX-208ENST00000587260 DAND5Q8N907 189 aa9.63□□□□□ -0.87
NFIX-208ENST00000587260 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
NFIX-208ENST00000587260 GCSHP23434 173 aa9.62□□□□□ -0.87
NFIX-208ENST00000587260 MUSTN1Q8IVN3 82 aa9.62□□□□□ -0.87
NFIX-208ENST00000587260 C9orf163Q8N9P6 203 aa9.62□□□□□ -0.87
NFIX-208ENST00000587260 LINC00308Q8TCZ7 52 aa9.62□□□□□ -0.87
NFIX-208ENST00000587260 HECTD4Q9Y4D8 3996 aa9.62□□□□□ -0.87
NFIX-208ENST00000587260 M0R143 59 aa9.61□□□□□ -0.87
NFIX-208ENST00000587260 BVES-AS1Q5T3Y7 98 aa9.61□□□□□ -0.87
NFIX-208ENST00000587260 SOSTDC1Q6X4U4 206 aa9.61□□□□□ -0.87
NFIX-208ENST00000587260 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
NFIX-208ENST00000587260 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
NFIX-208ENST00000587260 EIF4EBP3O60516 100 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms