RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 C6orf226Q5I0X4 101 aa8.15□□□□□ -1.1
CXXC1-208ENST00000587170 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.1
CXXC1-208ENST00000587170 ORMDL3Q8N138 153 aa8.15□□□□□ -1.1
CXXC1-208ENST00000587170 IGLV5-37A0A075B6J1 123 aa8.14□□□□□ -1.11
CXXC1-208ENST00000587170 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
CXXC1-208ENST00000587170 C2orf66Q6UXQ4 117 aa8.14□□□□□ -1.11
CXXC1-208ENST00000587170 LINC00167Q96N53 147 aa8.14□□□□□ -1.11
CXXC1-208ENST00000587170 ALKBH7Q9BT30 221 aaPredicted RBP8.14□□□□□ -1.11
CXXC1-208ENST00000587170 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
CXXC1-208ENST00000587170 ZC2HC1BQ5TFG8 222 aa8.13□□□□□ -1.11
CXXC1-208ENST00000587170 PRELID3AQ96N28 172 aa8.13□□□□□ -1.11
CXXC1-208ENST00000587170 NAT8Q9UHE5 227 aa8.13□□□□□ -1.11
CXXC1-208ENST00000587170 CYSLTR1Q9Y271 337 aa8.13□□□□□ -1.11
CXXC1-208ENST00000587170 RPL37AP8A6NKH3 93 aa8.12□□□□□ -1.11
CXXC1-208ENST00000587170 CXCL5P42830 114 aa8.12□□□□□ -1.11
CXXC1-208ENST00000587170 ATP5L2Q7Z4Y8 100 aa8.12□□□□□ -1.11
CXXC1-208ENST00000587170 LAMTOR2Q9Y2Q5 125 aa8.12□□□□□ -1.11
CXXC1-208ENST00000587170 IGIPA6NJ69 53 aa8.11□□□□□ -1.11
CXXC1-208ENST00000587170 TMEM136Q6ZRR5 245 aa8.11□□□□□ -1.11
CXXC1-208ENST00000587170 CDKN2A-AS1Q9UH64 79 aa8.11□□□□□ -1.11
CXXC1-208ENST00000587170 FSIP2Q5CZC0 6907 aa8.1□□□□□ -1.11
CXXC1-208ENST00000587170 HERVK_113P63121 156 aa8.1□□□□□ -1.11
CXXC1-208ENST00000587170 SEC11AP67812 179 aa8.1□□□□□ -1.11
CXXC1-208ENST00000587170 VCX2Q9H322 139 aa8.1□□□□□ -1.11
CXXC1-208ENST00000587170 C9JQL5 133 aa8.09□□□□□ -1.11
CXXC1-208ENST00000587170 K7EMI3 77 aa8.09□□□□□ -1.11
CXXC1-208ENST00000587170 PNRC1Q12796 327 aaPredicted RBP8.09□□□□□ -1.11
CXXC1-208ENST00000587170 Q8N8P6 123 aa8.09□□□□□ -1.11
CXXC1-208ENST00000587170 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
CXXC1-208ENST00000587170 UBE2AP49459 152 aa8.08□□□□□ -1.12
CXXC1-208ENST00000587170 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
CXXC1-208ENST00000587170 MAP1LC3AQ9H492 121 aa8.08□□□□□ -1.12
CXXC1-208ENST00000587170 GAGE10A6NGK3 116 aa8.07□□□□□ -1.12
CXXC1-208ENST00000587170 SMIM1B2RUZ4 78 aa8.07□□□□□ -1.12
CXXC1-208ENST00000587170 ORMDL2Q53FV1 153 aa8.07□□□□□ -1.12
CXXC1-208ENST00000587170 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
CXXC1-208ENST00000587170 PAPPA-AS1Q5QFB9 102 aa8.06□□□□□ -1.12
CXXC1-208ENST00000587170 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
CXXC1-208ENST00000587170 CRCT1Q9UGL9 99 aa8.06□□□□□ -1.12
CXXC1-208ENST00000587170 IGLV5-45A0A087WSX0 123 aa8.05□□□□□ -1.12
CXXC1-208ENST00000587170 LOC389332A0A1B0GUA5 103 aa8.05□□□□□ -1.12
CXXC1-208ENST00000587170 AKAP14Q86UN6 197 aa8.05□□□□□ -1.12
CXXC1-208ENST00000587170 NKAPP1Q8N9T2 125 aa8.05□□□□□ -1.12
CXXC1-208ENST00000587170 TIMM17AQ99595 171 aa8.05□□□□□ -1.12
CXXC1-208ENST00000587170 GEMIN7Q9H840 131 aaKnown RBP8.05□□□□□ -1.12
CXXC1-208ENST00000587170 PRLHP81277 87 aa8.04□□□□□ -1.12
CXXC1-208ENST00000587170 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
CXXC1-208ENST00000587170 PDZD11Q5EBL8 140 aa8.04□□□□□ -1.12
CXXC1-208ENST00000587170 IGKV2-28A0A075B6P5 120 aa8.03□□□□□ -1.12
CXXC1-208ENST00000587170 IGKV2D-28P01615 120 aa8.03□□□□□ -1.12
CXXC1-208ENST00000587170 SRSF3P84103 164 aaKnown RBP8.03□□□□□ -1.12
CXXC1-208ENST00000587170 COX7B2Q8TF08 81 aa8.03□□□□□ -1.12
CXXC1-208ENST00000587170 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
CXXC1-208ENST00000587170 SPAG11AQ6PDA7 123 aa8.02□□□□□ -1.13
CXXC1-208ENST00000587170 C3orf22Q8N5N4 141 aa8.02□□□□□ -1.13
CXXC1-208ENST00000587170 TMEM126AQ9H061 195 aa8.02□□□□□ -1.13
CXXC1-208ENST00000587170 NXT2Q9NPJ8 142 aaKnown RBP8.02□□□□□ -1.13
CXXC1-208ENST00000587170 TINCRA0A1B0GVN0 87 aa8.01□□□□□ -1.13
CXXC1-208ENST00000587170 SCO1O75880 301 aa8.01□□□□□ -1.13
CXXC1-208ENST00000587170 TOMM6Q96B49 74 aa8.01□□□□□ -1.13
CXXC1-208ENST00000587170 PLEKHB2Q96CS7 222 aa8.01□□□□□ -1.13
CXXC1-208ENST00000587170 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
CXXC1-208ENST00000587170 G0S2P27469 103 aa8□□□□□ -1.13
CXXC1-208ENST00000587170 PEA15Q15121 130 aa8□□□□□ -1.13
CXXC1-208ENST00000587170 TMEM238C9JI98 176 aa7.99□□□□□ -1.13
CXXC1-208ENST00000587170 M0R378 163 aa7.99□□□□□ -1.13
CXXC1-208ENST00000587170 VPREB1P12018 145 aa7.99□□□□□ -1.13
CXXC1-208ENST00000587170 ERASQ7Z444 233 aa7.99□□□□□ -1.13
CXXC1-208ENST00000587170 FAM19A1Q7Z5A9 133 aa7.99□□□□□ -1.13
CXXC1-208ENST00000587170 GNB1LQ9BYB4 327 aa7.98□□□□□ -1.13
CXXC1-208ENST00000587170 RAB5BP61020 215 aa7.97□□□□□ -1.13
CXXC1-208ENST00000587170 LINC00337Q8N6G1 96 aa7.96□□□□□ -1.14
CXXC1-208ENST00000587170 SPINK8P0C7L1 97 aa7.95□□□□□ -1.14
CXXC1-208ENST00000587170 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
CXXC1-208ENST00000587170 SPRR4Q96PI1 79 aa7.95□□□□□ -1.14
CXXC1-208ENST00000587170 SND1-IT1Q9HBX3 110 aa7.95□□□□□ -1.14
CXXC1-208ENST00000587170 ATP5LO75964 103 aa7.94□□□□□ -1.14
CXXC1-208ENST00000587170 CBLN2Q8IUK8 224 aa7.94□□□□□ -1.14
CXXC1-208ENST00000587170 Q8NDZ9 215 aa7.94□□□□□ -1.14
CXXC1-208ENST00000587170 IGLV5-39A0A0G2JS06 123 aa7.93□□□□□ -1.14
CXXC1-208ENST00000587170 LINC01549A6NIU2 74 aa7.93□□□□□ -1.14
CXXC1-208ENST00000587170 ADCYAP1P18509 176 aa7.93□□□□□ -1.14
CXXC1-208ENST00000587170 SCGB3A1Q96QR1 104 aa7.93□□□□□ -1.14
CXXC1-208ENST00000587170 MRPL18Q9H0U6 180 aaKnown RBP7.93□□□□□ -1.14
CXXC1-208ENST00000587170 CST9LQ9H4G1 147 aa7.93□□□□□ -1.14
CXXC1-208ENST00000587170 LINC01546A6NGU7 62 aa7.92□□□□□ -1.14
CXXC1-208ENST00000587170 RPL24P83731 157 aaKnown RBP7.92□□□□□ -1.14
CXXC1-208ENST00000587170 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
CXXC1-208ENST00000587170 HIGD2AQ9BW72 106 aa7.92□□□□□ -1.14
CXXC1-208ENST00000587170 PFN2P35080 140 aa7.91□□□□□ -1.14
CXXC1-208ENST00000587170 COX17Q14061 63 aa7.91□□□□□ -1.14
CXXC1-208ENST00000587170 Q8NBF4 154 aa7.91□□□□□ -1.14
CXXC1-208ENST00000587170 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
CXXC1-208ENST00000587170 H3BRM9 83 aa7.9□□□□□ -1.14
CXXC1-208ENST00000587170 SPINK1P00995 79 aa7.9□□□□□ -1.14
CXXC1-208ENST00000587170 C4orf48Q5BLP8 95 aa7.9□□□□□ -1.14
CXXC1-208ENST00000587170 ERG28Q9UKR5 140 aa7.9□□□□□ -1.14
CXXC1-208ENST00000587170 ZNF706Q9Y5V0 76 aaPredicted RBP7.9□□□□□ -1.14
CXXC1-208ENST00000587170 MT-ND4LP03901 98 aa7.89□□□□□ -1.15
CXXC1-208ENST00000587170 PMVKQ15126 192 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms