RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 CDKN2A-AS1Q9UH64 79 aa12.65□□□□□ -0.38
VAT1-203ENST00000587062 NDUFC2-KCTD14E9PQ53 114 aa12.64□□□□□ -0.39
VAT1-203ENST00000587062 SERTAD4-AS1Q5TG53 156 aa12.64□□□□□ -0.39
VAT1-203ENST00000587062 C2orf82Q6UX34 121 aa12.64□□□□□ -0.39
VAT1-203ENST00000587062 MYCBP2O75592 4640 aa12.64□□□□□ -0.39
VAT1-203ENST00000587062 SPINK6Q6UWN8 80 aa12.63□□□□□ -0.39
VAT1-203ENST00000587062 CST9LQ9H4G1 147 aa12.63□□□□□ -0.39
VAT1-203ENST00000587062 PDZD11Q5EBL8 140 aa12.62□□□□□ -0.39
VAT1-203ENST00000587062 H3BRM9 83 aa12.61□□□□□ -0.39
VAT1-203ENST00000587062 REG3GQ6UW15 175 aa12.61□□□□□ -0.39
VAT1-203ENST00000587062 C18orf32Q8TCD1 76 aa12.61□□□□□ -0.39
VAT1-203ENST00000587062 F8VRH5 84 aa12.6□□□□□ -0.39
VAT1-203ENST00000587062 HBDP02042 147 aa12.6□□□□□ -0.39
VAT1-203ENST00000587062 NDUFA6P56556 154 aa12.6□□□□□ -0.39
VAT1-203ENST00000587062 PHF5AQ7RTV0 110 aaKnown RBP12.58□□□□□ -0.4
VAT1-203ENST00000587062 IGLV5-45A0A087WSX0 123 aa12.57□□□□□ -0.4
VAT1-203ENST00000587062 ATP5LO75964 103 aa12.57□□□□□ -0.4
VAT1-203ENST00000587062 FAM19A5Q7Z5A7 132 aaPredicted RBP12.57□□□□□ -0.4
VAT1-203ENST00000587062 COX7B2Q8TF08 81 aa12.57□□□□□ -0.4
VAT1-203ENST00000587062 SMIM1B2RUZ4 78 aa12.56□□□□□ -0.4
VAT1-203ENST00000587062 PSORS1C2Q9UIG4 136 aa12.56□□□□□ -0.4
VAT1-203ENST00000587062 UBE2BP63146 152 aa12.55□□□□□ -0.4
VAT1-203ENST00000587062 C1orf137Q5JT78 98 aa12.55□□□□□ -0.4
VAT1-203ENST00000587062 M0QXV9 152 aa12.54□□□□□ -0.4
VAT1-203ENST00000587062 FAM168BA1KXE4 195 aa12.53□□□□□ -0.4
VAT1-203ENST00000587062 CHCHD1Q96BP2 118 aaKnown RBP12.53□□□□□ -0.4
VAT1-203ENST00000587062 SPINK8P0C7L1 97 aa12.52□□□□□ -0.41
VAT1-203ENST00000587062 SRSF9Q13242 221 aaKnown RBP eCLIP12.52□□□□□ -0.41
VAT1-203ENST00000587062 IGLC3P0DOY3 106 aa12.51□□□□□ -0.41
VAT1-203ENST00000587062 LBHQ53QV2 105 aaPredicted RBP12.51□□□□□ -0.41
VAT1-203ENST00000587062 URB1-AS1Q96HZ7 61 aa12.51□□□□□ -0.41
VAT1-203ENST00000587062 LINC01600Q96MT4 127 aa12.51□□□□□ -0.41
VAT1-203ENST00000587062 HERC1Q15751 4861 aa12.5□□□□□ -0.41
VAT1-203ENST00000587062 A0A096LNJ9 63 aa12.5□□□□□ -0.41
VAT1-203ENST00000587062 PMCHL1Q16048 86 aa12.5□□□□□ -0.41
VAT1-203ENST00000587062 C9orf129Q5T035 196 aaKnown RBP12.5□□□□□ -0.41
VAT1-203ENST00000587062 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
VAT1-203ENST00000587062 YPEL4Q96NS1 127 aa12.49□□□□□ -0.41
VAT1-203ENST00000587062 IGLV7-43P04211 117 aa12.47□□□□□ -0.41
VAT1-203ENST00000587062 DIRC1Q969H9 104 aa12.47□□□□□ -0.41
VAT1-203ENST00000587062 XAGE1AQ9HD64 81 aa12.47□□□□□ -0.41
VAT1-203ENST00000587062 ODF1Q14990 250 aa12.46□□□□□ -0.41
VAT1-203ENST00000587062 SFTA2Q6UW10 78 aa12.46□□□□□ -0.41
VAT1-203ENST00000587062 CBLN2Q8IUK8 224 aa12.46□□□□□ -0.41
VAT1-203ENST00000587062 HSBP1O75506 76 aa12.45□□□□□ -0.42
VAT1-203ENST00000587062 MT1HL1P0DM35 61 aa12.45□□□□□ -0.42
VAT1-203ENST00000587062 TMEM170BQ5T4T1 132 aa12.45□□□□□ -0.42
VAT1-203ENST00000587062 ZNF22P17026 224 aaPredicted RBP12.44□□□□□ -0.42
VAT1-203ENST00000587062 PLA2G2DQ9UNK4 145 aa12.44□□□□□ -0.42
VAT1-203ENST00000587062 CHTOPQ9Y3Y2 248 aaKnown RBP12.44□□□□□ -0.42
VAT1-203ENST00000587062 C22orf24Q9Y442 160 aa12.44□□□□□ -0.42
VAT1-203ENST00000587062 IFI27L1Q96BM0 104 aa12.43□□□□□ -0.42
VAT1-203ENST00000587062 TP73-AS1Q9UF72 201 aa12.43□□□□□ -0.42
VAT1-203ENST00000587062 LRP1Q07954 4544 aaKnown RBP12.43□□□□□ -0.42
VAT1-203ENST00000587062 IGLV5-39A0A0G2JS06 123 aa12.42□□□□□ -0.42
VAT1-203ENST00000587062 NUPR1O60356 82 aa12.42□□□□□ -0.42
VAT1-203ENST00000587062 TRAV12-1A0A0B4J245 112 aa12.41□□□□□ -0.42
VAT1-203ENST00000587062 KRTAP7-1Q8IUC3 87 aa12.41□□□□□ -0.42
VAT1-203ENST00000587062 SLC7A5P1Q8MH63 180 aa12.41□□□□□ -0.42
VAT1-203ENST00000587062 PKHD1L1Q86WI1 4243 aa12.4□□□□□ -0.42
VAT1-203ENST00000587062 C11orf86A6NJI1 115 aa12.4□□□□□ -0.42
VAT1-203ENST00000587062 TRGC2P03986 189 aa12.4□□□□□ -0.42
VAT1-203ENST00000587062 COX17Q14061 63 aa12.4□□□□□ -0.42
VAT1-203ENST00000587062 MRPL55Q7Z7F7 128 aaKnown RBP12.4□□□□□ -0.42
VAT1-203ENST00000587062 NKAPP1Q8N9T2 125 aa12.39□□□□□ -0.43
VAT1-203ENST00000587062 PFN2P35080 140 aa12.38□□□□□ -0.43
VAT1-203ENST00000587062 FAT3Q8TDW7 4589 aa12.38□□□□□ -0.43
VAT1-203ENST00000587062 H0Y9J4 135 aa12.37□□□□□ -0.43
VAT1-203ENST00000587062 KRTAP11-1Q8IUC1 163 aa12.36□□□□□ -0.43
VAT1-203ENST00000587062 ERG28Q9UKR5 140 aa12.36□□□□□ -0.43
VAT1-203ENST00000587062 KRTAP10-8P60410 259 aa12.35□□□□□ -0.43
VAT1-203ENST00000587062 LEPROTL1O95214 131 aa12.34□□□□□ -0.43
VAT1-203ENST00000587062 RPL24P83731 157 aaKnown RBP12.34□□□□□ -0.43
VAT1-203ENST00000587062 FAM19A2Q8N3H0 131 aa12.34□□□□□ -0.43
VAT1-203ENST00000587062 IGLV5-37A0A075B6J1 123 aa12.32□□□□□ -0.44
VAT1-203ENST00000587062 ZNF861PO60384 105 aa12.32□□□□□ -0.44
VAT1-203ENST00000587062 ATP6V1G1O75348 118 aa12.32□□□□□ -0.44
VAT1-203ENST00000587062 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
VAT1-203ENST00000587062 LINC00167Q96N53 147 aa12.32□□□□□ -0.44
VAT1-203ENST00000587062 HSPB8Q9UJY1 196 aa12.32□□□□□ -0.44
VAT1-203ENST00000587062 TMEM223A0PJW6 202 aa12.31□□□□□ -0.44
VAT1-203ENST00000587062 RPL28P46779 137 aaKnown RBP12.31□□□□□ -0.44
VAT1-203ENST00000587062 LINC00587B1AMM8 73 aa12.3□□□□□ -0.44
VAT1-203ENST00000587062 H0Y8G0 127 aa12.3□□□□□ -0.44
VAT1-203ENST00000587062 SERF1AO75920 110 aa12.3□□□□□ -0.44
VAT1-203ENST00000587062 RPL37AP8A6NKH3 93 aa12.29□□□□□ -0.44
VAT1-203ENST00000587062 LINC00158P58513 81 aa12.29□□□□□ -0.44
VAT1-203ENST00000587062 SND1-IT1Q9HBX3 110 aa12.29□□□□□ -0.44
VAT1-203ENST00000587062 IGLV1-50A0A075B6I6 118 aa12.28□□□□□ -0.44
VAT1-203ENST00000587062 GAGE10A6NGK3 116 aa12.28□□□□□ -0.44
VAT1-203ENST00000587062 COLCA2A8K830 154 aa12.28□□□□□ -0.44
VAT1-203ENST00000587062 BCE1O60756 84 aa12.28□□□□□ -0.44
VAT1-203ENST00000587062 HERV-K104P63124 156 aa12.27□□□□□ -0.45
VAT1-203ENST00000587062 PLNP26678 52 aa12.26□□□□□ -0.45
VAT1-203ENST00000587062 RPL13AP40429 203 aaKnown RBP12.26□□□□□ -0.45
VAT1-203ENST00000587062 MEIG1Q5JSS6 88 aa12.25□□□□□ -0.45
VAT1-203ENST00000587062 FABP4P15090 132 aa12.24□□□□□ -0.45
VAT1-203ENST00000587062 UBE2AP49459 152 aa12.24□□□□□ -0.45
VAT1-203ENST00000587062 MAP1LC3CQ9BXW4 147 aa12.24□□□□□ -0.45
VAT1-203ENST00000587062 MYMXA0A1B0GTQ4 84 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms