RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 MAPKAPK5-AS1Q8N8E1 139 aa5.7□□□□□ -1.5
NPC1-204ENST00000586718 A0A0J9YXY3 114 aa5.69□□□□□ -1.5
NPC1-204ENST00000586718 TIMM17BO60830 172 aa5.69□□□□□ -1.5
NPC1-204ENST00000586718 KRTAP26-1Q6PEX3 210 aa5.69□□□□□ -1.5
NPC1-204ENST00000586718 COPS9Q8WXC6 57 aa5.69□□□□□ -1.5
NPC1-204ENST00000586718 ZNF625Q96I27 306 aaPredicted RBP5.69□□□□□ -1.5
NPC1-204ENST00000586718 KRTAP1-5Q9BYS1 174 aa5.69□□□□□ -1.5
NPC1-204ENST00000586718 GVQW2A0A096LPI5 108 aaPredicted RBP5.68□□□□□ -1.5
NPC1-204ENST00000586718 F8WDY8 70 aa5.68□□□□□ -1.5
NPC1-204ENST00000586718 CTAG1AP78358 180 aa5.68□□□□□ -1.5
NPC1-204ENST00000586718 SRSF9Q13242 221 aaKnown RBP eCLIP5.68□□□□□ -1.5
NPC1-204ENST00000586718 TAL2Q16559 108 aa5.68□□□□□ -1.5
NPC1-204ENST00000586718 HIGD2BQ4VC39 106 aa5.68□□□□□ -1.5
NPC1-204ENST00000586718 C14orf177Q52M58 125 aa5.68□□□□□ -1.5
NPC1-204ENST00000586718 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
NPC1-204ENST00000586718 C2orf48Q96LS8 159 aa5.68□□□□□ -1.5
NPC1-204ENST00000586718 HIST1H4GQ99525 98 aa5.68□□□□□ -1.5
NPC1-204ENST00000586718 SPANXB1Q9NS25 103 aaPredicted RBP5.68□□□□□ -1.5
NPC1-204ENST00000586718 DNAH17Q9UFH2 4485 aa5.68□□□□□ -1.5
NPC1-204ENST00000586718 USP17L23D6RBM5 183 aa5.67□□□□□ -1.5
NPC1-204ENST00000586718 Q6ZVH6 145 aa5.67□□□□□ -1.5
NPC1-204ENST00000586718 CAMK2N2Q96S95 79 aa5.67□□□□□ -1.5
NPC1-204ENST00000586718 TMEM238LA0A1B0GVL6 79 aa5.66□□□□□ -1.5
NPC1-204ENST00000586718 A6NJY4 79 aa5.66□□□□□ -1.5
NPC1-204ENST00000586718 M0R2N4 97 aa5.66□□□□□ -1.5
NPC1-204ENST00000586718 KIAA0087Q14695 138 aa5.66□□□□□ -1.5
NPC1-204ENST00000586718 BATFQ16520 125 aa5.66□□□□□ -1.5
NPC1-204ENST00000586718 C6orf223Q8N319 242 aa5.66□□□□□ -1.5
NPC1-204ENST00000586718 SPANXDQ9BXN6 97 aa5.66□□□□□ -1.5
NPC1-204ENST00000586718 SPANXCQ9NY87 97 aa5.66□□□□□ -1.5
NPC1-204ENST00000586718 ERG28Q9UKR5 140 aa5.66□□□□□ -1.5
NPC1-204ENST00000586718 TRBV30A0A0K0K1B3 111 aa5.65□□□□□ -1.5
NPC1-204ENST00000586718 SMIM13P0DJ93 91 aa5.65□□□□□ -1.5
NPC1-204ENST00000586718 HINT1P49773 126 aaPredicted RBP5.65□□□□□ -1.5
NPC1-204ENST00000586718 PTTG1IPP53801 180 aa5.65□□□□□ -1.5
NPC1-204ENST00000586718 LINC00158P58513 81 aa5.65□□□□□ -1.5
NPC1-204ENST00000586718 C2orf82Q6UX34 121 aa5.65□□□□□ -1.5
NPC1-204ENST00000586718 NTN5Q8WTR8 489 aaPredicted RBP5.65□□□□□ -1.5
NPC1-204ENST00000586718 CARD19Q96LW7 228 aa5.65□□□□□ -1.5
NPC1-204ENST00000586718 A0A0U1RRA0 63 aa5.64□□□□□ -1.51
NPC1-204ENST00000586718 LECT2O14960 151 aa5.64□□□□□ -1.51
NPC1-204ENST00000586718 IFITM1P13164 125 aa5.64□□□□□ -1.51
NPC1-204ENST00000586718 PFN2P35080 140 aa5.64□□□□□ -1.51
NPC1-204ENST00000586718 RPL24P83731 157 aaKnown RBP5.64□□□□□ -1.51
NPC1-204ENST00000586718 SYCNQ0VAF6 134 aa5.64□□□□□ -1.51
NPC1-204ENST00000586718 COX17Q14061 63 aa5.64□□□□□ -1.51
NPC1-204ENST00000586718 Q6ZR54 194 aa5.64□□□□□ -1.51
NPC1-204ENST00000586718 CEND1Q8N111 149 aa5.64□□□□□ -1.51
NPC1-204ENST00000586718 PKIGQ9Y2B9 76 aa5.64□□□□□ -1.51
NPC1-204ENST00000586718 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.63□□□□□ -1.51
NPC1-204ENST00000586718 A6NDN8 102 aa5.63□□□□□ -1.51
NPC1-204ENST00000586718 C1orf134Q5TEV5 83 aa5.63□□□□□ -1.51
NPC1-204ENST00000586718 LINC00526Q96FQ7 95 aa5.63□□□□□ -1.51
NPC1-204ENST00000586718 LITAFQ99732 161 aa5.63□□□□□ -1.51
NPC1-204ENST00000586718 KMT2AQ03164 3969 aa5.63□□□□□ -1.51
NPC1-204ENST00000586718 FRAS1Q86XX4 4008 aa5.62□□□□□ -1.51
NPC1-204ENST00000586718 EREGO14944 169 aa5.62□□□□□ -1.51
NPC1-204ENST00000586718 NPC2P61916 151 aa5.62□□□□□ -1.51
NPC1-204ENST00000586718 BVES-AS1Q5T3Y7 98 aa5.62□□□□□ -1.51
NPC1-204ENST00000586718 UNQ6190/PRO20217Q6UXQ8 127 aa5.62□□□□□ -1.51
NPC1-204ENST00000586718 Q6ZRU5 148 aa5.62□□□□□ -1.51
NPC1-204ENST00000586718 MIR7-3HGQ8N6C7 128 aa5.62□□□□□ -1.51
NPC1-204ENST00000586718 C6orf48Q9UBA6 75 aa5.62□□□□□ -1.51
NPC1-204ENST00000586718 RNF151Q2KHN1 245 aa5.61□□□□□ -1.51
NPC1-204ENST00000586718 C10orf25Q5T742 122 aa5.61□□□□□ -1.51
NPC1-204ENST00000586718 Q6ZRN7 208 aaPredicted RBP5.61□□□□□ -1.51
NPC1-204ENST00000586718 DAND5Q8N907 189 aa5.61□□□□□ -1.51
NPC1-204ENST00000586718 LINC00308Q8TCZ7 52 aa5.61□□□□□ -1.51
NPC1-204ENST00000586718 PPDPFQ9H3Y8 114 aa5.61□□□□□ -1.51
NPC1-204ENST00000586718 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
NPC1-204ENST00000586718 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
NPC1-204ENST00000586718 FXYD2P54710 66 aa5.6□□□□□ -1.51
NPC1-204ENST00000586718 CNBPP62633 177 aaKnown RBP5.6□□□□□ -1.51
NPC1-204ENST00000586718 COL5A1-AS1Q5SY13 56 aa5.6□□□□□ -1.51
NPC1-204ENST00000586718 ADAMTSL4-AS1Q5T5F5 129 aa5.6□□□□□ -1.51
NPC1-204ENST00000586718 MUSTN1Q8IVN3 82 aa5.6□□□□□ -1.51
NPC1-204ENST00000586718 SNHG12Q9BXW3 62 aa5.6□□□□□ -1.51
NPC1-204ENST00000586718 NHP2Q9NX24 153 aaKnown RBP5.6□□□□□ -1.51
NPC1-204ENST00000586718 LCE6AA0A183 80 aa5.59□□□□□ -1.51
NPC1-204ENST00000586718 NDUFC2-KCTD14E9PQ53 114 aa5.59□□□□□ -1.51
NPC1-204ENST00000586718 RPL18AQ02543 176 aaKnown RBP5.59□□□□□ -1.51
NPC1-204ENST00000586718 WFDC2Q14508 124 aa5.59□□□□□ -1.51
NPC1-204ENST00000586718 LBHQ53QV2 105 aaPredicted RBP5.59□□□□□ -1.51
NPC1-204ENST00000586718 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.51
NPC1-204ENST00000586718 RAB37Q96AX2 223 aa5.59□□□□□ -1.51
NPC1-204ENST00000586718 RYR2Q92736 4967 aa5.58□□□□□ -1.52
NPC1-204ENST00000586718 HECTD4Q9Y4D8 3996 aa5.58□□□□□ -1.52
NPC1-204ENST00000586718 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.58□□□□□ -1.52
NPC1-204ENST00000586718 LOC107984640A0A0U1RRK4 108 aa5.58□□□□□ -1.52
NPC1-204ENST00000586718 A4D1N5 150 aa5.58□□□□□ -1.52
NPC1-204ENST00000586718 LRCOL1A6NCL2 159 aa5.58□□□□□ -1.52
NPC1-204ENST00000586718 Q8N814 137 aa5.58□□□□□ -1.52
NPC1-204ENST00000586718 SND1-IT1Q9HBX3 110 aa5.58□□□□□ -1.52
NPC1-204ENST00000586718 FAT2Q9NYQ8 4349 aa5.57□□□□□ -1.52
NPC1-204ENST00000586718 A0A087WTM6 91 aa5.57□□□□□ -1.52
NPC1-204ENST00000586718 A0A0B4J2C4 111 aa5.57□□□□□ -1.52
NPC1-204ENST00000586718 TLX1NBP0CAT3 122 aa5.57□□□□□ -1.52
NPC1-204ENST00000586718 DNAH5Q8TE73 4624 aa5.57□□□□□ -1.52
NPC1-204ENST00000586718 GAGE2EQ4V326 116 aa5.56□□□□□ -1.52
NPC1-204ENST00000586718 SOSTDC1Q6X4U4 206 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms