RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 PKIGQ9Y2B9 76 aa5.17□□□□□ -1.58
SMAD4-204ENST00000586253 IGLV4-69A0A075B6H9 119 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 A0A0J9YXV3 536 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST1H2BKO60814 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 SERF1AO75920 110 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST1H2BJP06899 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST1H2BOP23527 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST1H2BBP33778 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST1H2BDP58876 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST1H2BCP62807 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 SPAG11BQ08648 103 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 SYCNQ0VAF6 134 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST2H2BEQ16778 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 LINC01620Q4KN68 170 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-204ENST00000586253 SDIM1Q6ZPB5 146 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 ORAOV1Q8WV07 137 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST1H2BHQ93079 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 CARD19Q96LW7 228 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST1H2BNQ99877 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 HIST1H2BMQ99879 126 aa5.16□□□□□ -1.58
SMAD4-204ENST00000586253 TRAV12-1A0A0B4J245 112 aa5.15□□□□□ -1.59
SMAD4-204ENST00000586253 IGLC3P0DOY3 106 aa5.15□□□□□ -1.59
SMAD4-204ENST00000586253 XGP55808 180 aa5.15□□□□□ -1.59
SMAD4-204ENST00000586253 FAM19A2Q8N3H0 131 aa5.15□□□□□ -1.59
SMAD4-204ENST00000586253 LINC00469Q8N7U9 141 aa5.15□□□□□ -1.59
SMAD4-204ENST00000586253 IFI27L1Q96BM0 104 aa5.15□□□□□ -1.59
SMAD4-204ENST00000586253 LINC00526Q96FQ7 95 aa5.15□□□□□ -1.59
SMAD4-204ENST00000586253 PACRGQ96M98 296 aaPredicted RBP5.15□□□□□ -1.59
SMAD4-204ENST00000586253 CAMK2N2Q96S95 79 aa5.15□□□□□ -1.59
SMAD4-204ENST00000586253 CDKN2A-AS1Q9UH64 79 aa5.15□□□□□ -1.59
SMAD4-204ENST00000586253 H3BRM9 83 aa5.14□□□□□ -1.59
SMAD4-204ENST00000586253 NDUFA1O15239 70 aa5.14□□□□□ -1.59
SMAD4-204ENST00000586253 LEPROTL1O95214 131 aa5.14□□□□□ -1.59
SMAD4-204ENST00000586253 NDUFA6P56556 154 aa5.14□□□□□ -1.59
SMAD4-204ENST00000586253 CIRBPQ14011 172 aaKnown RBP5.14□□□□□ -1.59
SMAD4-204ENST00000586253 KIAA0087Q14695 138 aa5.14□□□□□ -1.59
SMAD4-204ENST00000586253 CHAC1Q9BUX1 264 aa5.14□□□□□ -1.59
SMAD4-204ENST00000586253 MRPL35Q9NZE8 188 aaKnown RBP5.14□□□□□ -1.59
SMAD4-204ENST00000586253 HSPB8Q9UJY1 196 aa5.14□□□□□ -1.59
SMAD4-204ENST00000586253 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
SMAD4-204ENST00000586253 SMIM1B2RUZ4 78 aa5.13□□□□□ -1.59
SMAD4-204ENST00000586253 NUPR1O60356 82 aa5.13□□□□□ -1.59
SMAD4-204ENST00000586253 COA6Q5JTJ3 125 aaKnown RBP5.13□□□□□ -1.59
SMAD4-204ENST00000586253 Q6ZRU5 148 aa5.13□□□□□ -1.59
SMAD4-204ENST00000586253 Q8IZM0 81 aa5.13□□□□□ -1.59
SMAD4-204ENST00000586253 LINC00474Q9P2X8 69 aa5.13□□□□□ -1.59
SMAD4-204ENST00000586253 DNAH8Q96JB1 4490 aa5.13□□□□□ -1.59
SMAD4-204ENST00000586253 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
SMAD4-204ENST00000586253 HSPG2P98160 4391 aa5.13□□□□□ -1.59
SMAD4-204ENST00000586253 TRBV30A0A0K0K1B3 111 aa5.12□□□□□ -1.59
SMAD4-204ENST00000586253 F8VRH5 84 aa5.12□□□□□ -1.59
SMAD4-204ENST00000586253 PRSS2P07478 247 aa5.12□□□□□ -1.59
SMAD4-204ENST00000586253 CXCL5P42830 114 aa5.12□□□□□ -1.59
SMAD4-204ENST00000586253 SCXQ7RTU7 201 aa5.12□□□□□ -1.59
SMAD4-204ENST00000586253 CHTOPQ9Y3Y2 248 aaKnown RBP5.12□□□□□ -1.59
SMAD4-204ENST00000586253 IGLV5-39A0A0G2JS06 123 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 LOC107984640A0A0U1RRK4 108 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 C11orf86A6NJI1 115 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 TLX1NBP0CAT3 122 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 ZNF22P17026 224 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-204ENST00000586253 CKS1BP61024 79 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 C6orf226Q5I0X4 101 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 UNQ6190/PRO20217Q6UXQ8 127 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 SPACA4Q8TDM5 124 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 TOMM7Q9P0U1 55 aa5.11□□□□□ -1.59
SMAD4-204ENST00000586253 A0A096LNI7 61 aa5.1□□□□□ -1.59
SMAD4-204ENST00000586253 SPINK8P0C7L1 97 aa5.1□□□□□ -1.59
SMAD4-204ENST00000586253 C10orf25Q5T742 122 aa5.1□□□□□ -1.59
SMAD4-204ENST00000586253 CIRBP-AS1Q8TBR5 109 aa5.1□□□□□ -1.59
SMAD4-204ENST00000586253 COX7B2Q8TF08 81 aa5.1□□□□□ -1.59
SMAD4-204ENST00000586253 C6orf48Q9UBA6 75 aa5.1□□□□□ -1.59
SMAD4-204ENST00000586253 KIAA1109Q2LD37 5005 aa5.1□□□□□ -1.59
SMAD4-204ENST00000586253 IGKV2-24A0A0C4DH68 120 aa5.09□□□□□ -1.59
SMAD4-204ENST00000586253 PANO1I0J062 215 aa5.09□□□□□ -1.59
SMAD4-204ENST00000586253 CHTF8P0CG12 524 aa5.09□□□□□ -1.59
SMAD4-204ENST00000586253 FABP4P15090 132 aa5.09□□□□□ -1.59
SMAD4-204ENST00000586253 PLNP26678 52 aa5.09□□□□□ -1.59
SMAD4-204ENST00000586253 HAMPP81172 84 aa5.09□□□□□ -1.59
SMAD4-204ENST00000586253 TMEM170BQ5T4T1 132 aa5.09□□□□□ -1.59
SMAD4-204ENST00000586253 C2orf82Q6UX34 121 aa5.09□□□□□ -1.59
SMAD4-204ENST00000586253 MAP1LC3CQ9BXW4 147 aa5.09□□□□□ -1.59
SMAD4-204ENST00000586253 RYR1P21817 5038 aa5.08□□□□□ -1.6
SMAD4-204ENST00000586253 A0A087WYN8 130 aa5.08□□□□□ -1.6
SMAD4-204ENST00000586253 TMEM223A0PJW6 202 aa5.08□□□□□ -1.6
SMAD4-204ENST00000586253 H0Y8G0 127 aa5.08□□□□□ -1.6
SMAD4-204ENST00000586253 RPL18AQ02543 176 aaKnown RBP5.08□□□□□ -1.6
SMAD4-204ENST00000586253 GAGE2BQ13066 116 aa5.08□□□□□ -1.6
SMAD4-204ENST00000586253 MAJINQ3KP22 176 aa5.08□□□□□ -1.6
SMAD4-204ENST00000586253 SFTA2Q6UW10 78 aa5.08□□□□□ -1.6
SMAD4-204ENST00000586253 PLAC8Q9NZF1 115 aa5.08□□□□□ -1.6
SMAD4-204ENST00000586253 EPM2AB3EWF7 344 aa5.07□□□□□ -1.6
SMAD4-204ENST00000586253 NDUFC2-KCTD14E9PQ53 114 aa5.07□□□□□ -1.6
SMAD4-204ENST00000586253 SMR3BP02814 79 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-204ENST00000586253 STPG4Q8N801 248 aa5.07□□□□□ -1.6
SMAD4-204ENST00000586253 DPH3Q96FX2 82 aa5.07□□□□□ -1.6
SMAD4-204ENST00000586253 HERC2O95714 4834 aa5.06□□□□□ -1.6
SMAD4-204ENST00000586253 SYS1-DBNDD2H3BUS1 97 aa5.06□□□□□ -1.6
SMAD4-204ENST00000586253 DPM2O94777 84 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms