RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 XCL1P47992 114 aa7.2□□□□□ -1.26
LIG3-207ENST00000586119 Q6ZN92 141 aa7.2□□□□□ -1.26
LIG3-207ENST00000586119 Q6ZUT4 128 aa7.2□□□□□ -1.26
LIG3-207ENST00000586119 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
LIG3-207ENST00000586119 IGLV4-3A0A075B6K6 122 aa7.19□□□□□ -1.26
LIG3-207ENST00000586119 LINC00959A0A1B0GUT2 108 aa7.19□□□□□ -1.26
LIG3-207ENST00000586119 SS18Q15532 418 aa7.19□□□□□ -1.26
LIG3-207ENST00000586119 SPINK6Q6UWN8 80 aa7.19□□□□□ -1.26
LIG3-207ENST00000586119 A0A096LNJ9 63 aa7.18□□□□□ -1.26
LIG3-207ENST00000586119 M0R143 59 aa7.18□□□□□ -1.26
LIG3-207ENST00000586119 ATP5LO75964 103 aa7.18□□□□□ -1.26
LIG3-207ENST00000586119 TEX43Q6ZNM6 134 aa7.18□□□□□ -1.26
LIG3-207ENST00000586119 FAM104AQ969W3 186 aa7.18□□□□□ -1.26
LIG3-207ENST00000586119 AMELXQ99217 191 aa7.18□□□□□ -1.26
LIG3-207ENST00000586119 VCX2Q9H322 139 aa7.18□□□□□ -1.26
LIG3-207ENST00000586119 PRO1933Q9H354 126 aa7.18□□□□□ -1.26
LIG3-207ENST00000586119 A0A1W2PNN7 141 aa7.17□□□□□ -1.26
LIG3-207ENST00000586119 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.17□□□□□ -1.26
LIG3-207ENST00000586119 SERF1AO75920 110 aa7.17□□□□□ -1.26
LIG3-207ENST00000586119 SCGB1D1O95968 90 aa7.17□□□□□ -1.26
LIG3-207ENST00000586119 IGHV1-58A0A0C4DH39 117 aa7.16□□□□□ -1.26
LIG3-207ENST00000586119 LINC00310P59036 64 aa7.16□□□□□ -1.26
LIG3-207ENST00000586119 CARD19Q96LW7 228 aa7.16□□□□□ -1.26
LIG3-207ENST00000586119 OPRPNQ99935 248 aaPredicted RBP7.16□□□□□ -1.26
LIG3-207ENST00000586119 TRAV13-1A0A0B4J241 112 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 A0A1B0GV90 55 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 SEC11AP67812 179 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 SYCNQ0VAF6 134 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 GAGE2BQ13066 116 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 PMCHL1Q16048 86 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 RNASE13Q5GAN3 156 aaKnown RBP7.15□□□□□ -1.26
LIG3-207ENST00000586119 REG3GQ6UW15 175 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 Q6ZRP5 223 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 FAM19A3Q7Z5A8 133 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 MIEN1Q9BRT3 115 aa7.15□□□□□ -1.26
LIG3-207ENST00000586119 UBE2D1P51668 147 aa7.14□□□□□ -1.27
LIG3-207ENST00000586119 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
LIG3-207ENST00000586119 PMVKQ15126 192 aa7.14□□□□□ -1.27
LIG3-207ENST00000586119 LINC00173Q6ZV60 143 aa7.14□□□□□ -1.27
LIG3-207ENST00000586119 HSPB8Q9UJY1 196 aa7.14□□□□□ -1.27
LIG3-207ENST00000586119 IGLV4-69A0A075B6H9 119 aa7.13□□□□□ -1.27
LIG3-207ENST00000586119 C20orf202A1L168 122 aa7.13□□□□□ -1.27
LIG3-207ENST00000586119 NUPR1O60356 82 aa7.13□□□□□ -1.27
LIG3-207ENST00000586119 LEPROTL1O95214 131 aa7.13□□□□□ -1.27
LIG3-207ENST00000586119 FAM19A2Q8N3H0 131 aa7.13□□□□□ -1.27
LIG3-207ENST00000586119 IFI27L1Q96BM0 104 aa7.13□□□□□ -1.27
LIG3-207ENST00000586119 VAMP8Q9BV40 100 aa7.13□□□□□ -1.27
LIG3-207ENST00000586119 CST9LQ9H4G1 147 aa7.13□□□□□ -1.27
LIG3-207ENST00000586119 ZNF561-AS1K7EIQ3 104 aa7.12□□□□□ -1.27
LIG3-207ENST00000586119 LINC00242Q5T6M2 205 aa7.12□□□□□ -1.27
LIG3-207ENST00000586119 LINC00474Q9P2X8 69 aa7.12□□□□□ -1.27
LIG3-207ENST00000586119 TRAV12-1A0A0B4J245 112 aa7.11□□□□□ -1.27
LIG3-207ENST00000586119 IGHV3OR16-9A0A0B4J2B5 98 aa7.11□□□□□ -1.27
LIG3-207ENST00000586119 HERVK_113P63121 156 aa7.11□□□□□ -1.27
LIG3-207ENST00000586119 PHF5AQ7RTV0 110 aaKnown RBP7.11□□□□□ -1.27
LIG3-207ENST00000586119 LINC01561Q8N1V8 128 aa7.11□□□□□ -1.27
LIG3-207ENST00000586119 SNHG12Q9BXW3 62 aa7.11□□□□□ -1.27
LIG3-207ENST00000586119 PSORS1C2Q9UIG4 136 aa7.11□□□□□ -1.27
LIG3-207ENST00000586119 LOC107984640A0A0U1RRK4 108 aa7.1□□□□□ -1.27
LIG3-207ENST00000586119 TINCRA0A1B0GVN0 87 aa7.1□□□□□ -1.27
LIG3-207ENST00000586119 COX7A2LO14548 114 aa7.1□□□□□ -1.27
LIG3-207ENST00000586119 C9orf116Q5BN46 136 aaPredicted RBP7.1□□□□□ -1.27
LIG3-207ENST00000586119 ZC2HC1BQ5TFG8 222 aa7.1□□□□□ -1.27
LIG3-207ENST00000586119 C5orf38Q86SI9 138 aa7.1□□□□□ -1.27
LIG3-207ENST00000586119 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
LIG3-207ENST00000586119 GEMIN7Q9H840 131 aaKnown RBP7.1□□□□□ -1.27
LIG3-207ENST00000586119 APOMO95445 188 aa7.09□□□□□ -1.27
LIG3-207ENST00000586119 MALP21145 153 aa7.09□□□□□ -1.27
LIG3-207ENST00000586119 UQCR10Q9UDW1 63 aa7.09□□□□□ -1.27
LIG3-207ENST00000586119 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
LIG3-207ENST00000586119 A0A087WZ39 114 aa7.08□□□□□ -1.28
LIG3-207ENST00000586119 IGLC3P0DOY3 106 aa7.08□□□□□ -1.28
LIG3-207ENST00000586119 C1orf137Q5JT78 98 aa7.08□□□□□ -1.28
LIG3-207ENST00000586119 LCE2DQ5TA82 110 aaPredicted RBP7.08□□□□□ -1.28
LIG3-207ENST00000586119 PRR26Q8N8Z3 221 aa7.08□□□□□ -1.28
LIG3-207ENST00000586119 CAMK2N2Q96S95 79 aa7.08□□□□□ -1.28
LIG3-207ENST00000586119 MAP1LC3CQ9BXW4 147 aa7.08□□□□□ -1.28
LIG3-207ENST00000586119 COL5A1-AS1Q5SY13 56 aa7.07□□□□□ -1.28
LIG3-207ENST00000586119 CHTOPQ9Y3Y2 248 aaKnown RBP7.07□□□□□ -1.28
LIG3-207ENST00000586119 FAM168BA1KXE4 195 aa7.06□□□□□ -1.28
LIG3-207ENST00000586119 F8VRH5 84 aa7.06□□□□□ -1.28
LIG3-207ENST00000586119 F8WDY8 70 aa7.06□□□□□ -1.28
LIG3-207ENST00000586119 H3BRM9 83 aa7.06□□□□□ -1.28
LIG3-207ENST00000586119 KRTDAPP60985 99 aa7.06□□□□□ -1.28
LIG3-207ENST00000586119 RPL18AQ02543 176 aaKnown RBP7.06□□□□□ -1.28
LIG3-207ENST00000586119 CDKN2A-AS1Q9UH64 79 aa7.05□□□□□ -1.28
LIG3-207ENST00000586119 PKIGQ9Y2B9 76 aa7.05□□□□□ -1.28
LIG3-207ENST00000586119 PAM16Q9Y3D7 125 aa7.05□□□□□ -1.28
LIG3-207ENST00000586119 DLEU1O43261 78 aa7.04□□□□□ -1.28
LIG3-207ENST00000586119 C3orf79P0CE67 100 aa7.04□□□□□ -1.28
LIG3-207ENST00000586119 SPATA45Q537H7 98 aa7.04□□□□□ -1.28
LIG3-207ENST00000586119 C10orf25Q5T742 122 aa7.04□□□□□ -1.28
LIG3-207ENST00000586119 PET117Q6UWS5 81 aa7.04□□□□□ -1.28
LIG3-207ENST00000586119 C2orf48Q96LS8 159 aa7.04□□□□□ -1.28
LIG3-207ENST00000586119 MRPL35Q9NZE8 188 aaKnown RBP7.04□□□□□ -1.28
LIG3-207ENST00000586119 SYS1-DBNDD2H3BUS1 97 aa7.03□□□□□ -1.28
LIG3-207ENST00000586119 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
LIG3-207ENST00000586119 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
LIG3-207ENST00000586119 PLNP26678 52 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms