RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CFAP161Q6P656 301 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 TM2D2Q9BX73 214 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
VMP1-202ENST00000585847 NDUFA12Q9UI09 145 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 DNAH10Q8IVF4 4471 aa8.47□□□□□ -1.05
VMP1-202ENST00000585847 IGHV3-64A0A075B6Q5 118 aa8.47□□□□□ -1.05
VMP1-202ENST00000585847 FOXI1Q12951 378 aa8.47□□□□□ -1.05
VMP1-202ENST00000585847 COX7B2Q8TF08 81 aa8.47□□□□□ -1.05
VMP1-202ENST00000585847 CLPSL2Q6UWE3 100 aa8.46□□□□□ -1.06
VMP1-202ENST00000585847 C2orf91Q6ZV80 131 aa8.46□□□□□ -1.06
VMP1-202ENST00000585847 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
VMP1-202ENST00000585847 TMEM238LA0A1B0GVL6 79 aa8.45□□□□□ -1.06
VMP1-202ENST00000585847 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
VMP1-202ENST00000585847 A6NJY4 79 aa8.45□□□□□ -1.06
VMP1-202ENST00000585847 TP73-AS1Q9UF72 201 aa8.45□□□□□ -1.06
VMP1-202ENST00000585847 DNAH17Q9UFH2 4485 aa8.45□□□□□ -1.06
VMP1-202ENST00000585847 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
VMP1-202ENST00000585847 ZNF625Q96I27 306 aaPredicted RBP8.44□□□□□ -1.06
VMP1-202ENST00000585847 KIAA1109Q2LD37 5005 aa8.44□□□□□ -1.06
VMP1-202ENST00000585847 IFITM1P13164 125 aa8.43□□□□□ -1.06
VMP1-202ENST00000585847 CKS1BP61024 79 aa8.43□□□□□ -1.06
VMP1-202ENST00000585847 COX17Q14061 63 aa8.43□□□□□ -1.06
VMP1-202ENST00000585847 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
VMP1-202ENST00000585847 C5orf38Q86SI9 138 aa8.43□□□□□ -1.06
VMP1-202ENST00000585847 ORAOV1Q8WV07 137 aa8.43□□□□□ -1.06
VMP1-202ENST00000585847 IGLV10-54A0A075B6I4 117 aa8.42□□□□□ -1.06
VMP1-202ENST00000585847 PTTG1IPP53801 180 aa8.42□□□□□ -1.06
VMP1-202ENST00000585847 CTAG1AP78358 180 aa8.42□□□□□ -1.06
VMP1-202ENST00000585847 MAPKAPK5-AS1Q8N8E1 139 aa8.42□□□□□ -1.06
VMP1-202ENST00000585847 C2orf48Q96LS8 159 aa8.42□□□□□ -1.06
VMP1-202ENST00000585847 SPANXDQ9BXN6 97 aa8.42□□□□□ -1.06
VMP1-202ENST00000585847 SPANXCQ9NY87 97 aa8.42□□□□□ -1.06
VMP1-202ENST00000585847 IGKV2D-24A0A075B6R9 120 aa8.41□□□□□ -1.06
VMP1-202ENST00000585847 GVQW2A0A096LPI5 108 aaPredicted RBP8.41□□□□□ -1.06
VMP1-202ENST00000585847 A6NDN8 102 aa8.41□□□□□ -1.06
VMP1-202ENST00000585847 RTL8CO15255 209 aa8.41□□□□□ -1.06
VMP1-202ENST00000585847 SPAG11BQ08648 103 aa8.41□□□□□ -1.06
VMP1-202ENST00000585847 KRTAP26-1Q6PEX3 210 aa8.41□□□□□ -1.06
VMP1-202ENST00000585847 Q6ZRN7 208 aaPredicted RBP8.41□□□□□ -1.06
VMP1-202ENST00000585847 HIST1H4GQ99525 98 aa8.41□□□□□ -1.06
VMP1-202ENST00000585847 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
VMP1-202ENST00000585847 SRSF9Q13242 221 aaKnown RBP eCLIP8.4□□□□□ -1.06
VMP1-202ENST00000585847 C14orf177Q52M58 125 aa8.4□□□□□ -1.06
VMP1-202ENST00000585847 TTTY13Q9BZ97 58 aa8.4□□□□□ -1.06
VMP1-202ENST00000585847 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
VMP1-202ENST00000585847 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
VMP1-202ENST00000585847 LINC00336Q6ZUF6 198 aa8.39□□□□□ -1.07
VMP1-202ENST00000585847 C6orf223Q8N319 242 aa8.39□□□□□ -1.07
VMP1-202ENST00000585847 TOMM7Q9P0U1 55 aa8.39□□□□□ -1.07
VMP1-202ENST00000585847 PKIGQ9Y2B9 76 aa8.39□□□□□ -1.07
VMP1-202ENST00000585847 RYR1P21817 5038 aa8.39□□□□□ -1.07
VMP1-202ENST00000585847 TRBV30A0A0K0K1B3 111 aa8.38□□□□□ -1.07
VMP1-202ENST00000585847 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
VMP1-202ENST00000585847 CEND1Q8N111 149 aa8.38□□□□□ -1.07
VMP1-202ENST00000585847 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.37□□□□□ -1.07
VMP1-202ENST00000585847 KIAA0087Q14695 138 aa8.37□□□□□ -1.07
VMP1-202ENST00000585847 COL5A1-AS1Q5SY13 56 aa8.37□□□□□ -1.07
VMP1-202ENST00000585847 BVES-AS1Q5T3Y7 98 aa8.37□□□□□ -1.07
VMP1-202ENST00000585847 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
VMP1-202ENST00000585847 Q9HAA7 133 aa8.37□□□□□ -1.07
VMP1-202ENST00000585847 RNF151Q2KHN1 245 aa8.36□□□□□ -1.07
VMP1-202ENST00000585847 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
VMP1-202ENST00000585847 NTN5Q8WTR8 489 aaPredicted RBP8.35□□□□□ -1.07
VMP1-202ENST00000585847 LITAFQ99732 161 aa8.35□□□□□ -1.07
VMP1-202ENST00000585847 ERG28Q9UKR5 140 aa8.35□□□□□ -1.07
VMP1-202ENST00000585847 PSCAO43653 123 aa8.34□□□□□ -1.07
VMP1-202ENST00000585847 C15orf56Q8N910 161 aa8.34□□□□□ -1.07
VMP1-202ENST00000585847 SNHG12Q9BXW3 62 aa8.34□□□□□ -1.07
VMP1-202ENST00000585847 HINT1P49773 126 aaPredicted RBP8.33□□□□□ -1.08
VMP1-202ENST00000585847 TNP2Q05952 138 aa8.33□□□□□ -1.08
VMP1-202ENST00000585847 CAMK2N2Q96S95 79 aa8.33□□□□□ -1.08
VMP1-202ENST00000585847 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
VMP1-202ENST00000585847 A0A1B0GWB2 263 aa8.32□□□□□ -1.08
VMP1-202ENST00000585847 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
VMP1-202ENST00000585847 USP17L23D6RBM5 183 aa8.31□□□□□ -1.08
VMP1-202ENST00000585847 LINC00158P58513 81 aa8.31□□□□□ -1.08
VMP1-202ENST00000585847 WFDC2Q14508 124 aa8.31□□□□□ -1.08
VMP1-202ENST00000585847 A0A0B4J2C4 111 aa8.3□□□□□ -1.08
VMP1-202ENST00000585847 A0A1B0GVY2 172 aa8.3□□□□□ -1.08
VMP1-202ENST00000585847 LRCOL1A6NCL2 159 aa8.3□□□□□ -1.08
VMP1-202ENST00000585847 SMIM13P0DJ93 91 aa8.3□□□□□ -1.08
VMP1-202ENST00000585847 SYCNQ0VAF6 134 aa8.3□□□□□ -1.08
VMP1-202ENST00000585847 BATFQ16520 125 aa8.3□□□□□ -1.08
VMP1-202ENST00000585847 LINC00308Q8TCZ7 52 aa8.3□□□□□ -1.08
VMP1-202ENST00000585847 EREGO14944 169 aa8.29□□□□□ -1.08
VMP1-202ENST00000585847 CNBPP62633 177 aaKnown RBP8.29□□□□□ -1.08
VMP1-202ENST00000585847 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
VMP1-202ENST00000585847 PKD1P98161 4303 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 NDUFC2-KCTD14E9PQ53 114 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 NDUFC2O95298 119 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 TLX1NBP0CAT3 122 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 FXYD2P54710 66 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 ADAMTSL4-AS1Q5T5F5 129 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 C2orf82Q6UX34 121 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 MUSTN1Q8IVN3 82 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 CARD19Q96LW7 228 aa8.28□□□□□ -1.08
VMP1-202ENST00000585847 PKHD1P08F94 4074 aa8.27□□□□□ -1.09
VMP1-202ENST00000585847 A0A087WTM6 91 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms