RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 C6orf226Q5I0X4 101 aa8.52□□□□□ -1.05
SDF2-202ENST00000585428 LINC00469Q8N7U9 141 aa8.52□□□□□ -1.05
SDF2-202ENST00000585428 CKS1BP61024 79 aa8.51□□□□□ -1.05
SDF2-202ENST00000585428 PEA15Q15121 130 aa8.51□□□□□ -1.05
SDF2-202ENST00000585428 C2orf66Q6UXQ4 117 aa8.51□□□□□ -1.05
SDF2-202ENST00000585428 Q8IZM0 81 aa8.51□□□□□ -1.05
SDF2-202ENST00000585428 VCX2Q9H322 139 aa8.51□□□□□ -1.05
SDF2-202ENST00000585428 XAGE1AQ9HD64 81 aa8.51□□□□□ -1.05
SDF2-202ENST00000585428 TP73-AS1Q9UF72 201 aa8.51□□□□□ -1.05
SDF2-202ENST00000585428 LOC389332A0A1B0GUA5 103 aa8.5□□□□□ -1.05
SDF2-202ENST00000585428 IGIPA6NJ69 53 aa8.5□□□□□ -1.05
SDF2-202ENST00000585428 PRSS2P07478 247 aa8.5□□□□□ -1.05
SDF2-202ENST00000585428 NPSP0C0P6 89 aa8.5□□□□□ -1.05
SDF2-202ENST00000585428 ATP5L2Q7Z4Y8 100 aa8.5□□□□□ -1.05
SDF2-202ENST00000585428 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
SDF2-202ENST00000585428 LAMTOR2Q9Y2Q5 125 aa8.5□□□□□ -1.05
SDF2-202ENST00000585428 ALKBH7Q9BT30 221 aaPredicted RBP8.49□□□□□ -1.05
SDF2-202ENST00000585428 TOMM7Q9P0U1 55 aa8.49□□□□□ -1.05
SDF2-202ENST00000585428 CYSLTR1Q9Y271 337 aa8.49□□□□□ -1.05
SDF2-202ENST00000585428 hCG_2014768A0A024R1R8 64 aa8.48□□□□□ -1.05
SDF2-202ENST00000585428 BCE1O60756 84 aa8.48□□□□□ -1.05
SDF2-202ENST00000585428 CRYGAP11844 174 aa8.48□□□□□ -1.05
SDF2-202ENST00000585428 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
SDF2-202ENST00000585428 MRPL55Q7Z7F7 128 aaKnown RBP8.48□□□□□ -1.05
SDF2-202ENST00000585428 Q8N8P6 123 aa8.48□□□□□ -1.05
SDF2-202ENST00000585428 F8VRH5 84 aa8.47□□□□□ -1.05
SDF2-202ENST00000585428 TYMSOSQ8TAI1 123 aa8.47□□□□□ -1.05
SDF2-202ENST00000585428 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
SDF2-202ENST00000585428 CDKN2A-AS1Q9UH64 79 aa8.47□□□□□ -1.05
SDF2-202ENST00000585428 LINC00167Q96N53 147 aa8.46□□□□□ -1.06
SDF2-202ENST00000585428 K7EMI3 77 aa8.45□□□□□ -1.06
SDF2-202ENST00000585428 HERVK_113P63121 156 aa8.45□□□□□ -1.06
SDF2-202ENST00000585428 SEC11AP67812 179 aa8.45□□□□□ -1.06
SDF2-202ENST00000585428 ORMDL2Q53FV1 153 aa8.45□□□□□ -1.06
SDF2-202ENST00000585428 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
SDF2-202ENST00000585428 RPL37AP8A6NKH3 93 aa8.44□□□□□ -1.06
SDF2-202ENST00000585428 KRTAP13-2Q52LG2 175 aa8.44□□□□□ -1.06
SDF2-202ENST00000585428 FAT4Q6V0I7 4981 aa8.44□□□□□ -1.06
SDF2-202ENST00000585428 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
SDF2-202ENST00000585428 CXCL5P42830 114 aa8.42□□□□□ -1.06
SDF2-202ENST00000585428 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
SDF2-202ENST00000585428 TMA7Q9Y2S6 64 aaKnown RBP8.42□□□□□ -1.06
SDF2-202ENST00000585428 TIMM17AQ99595 171 aa8.41□□□□□ -1.06
SDF2-202ENST00000585428 GEMIN7Q9H840 131 aaKnown RBP8.41□□□□□ -1.06
SDF2-202ENST00000585428 NXT2Q9NPJ8 142 aaKnown RBP8.41□□□□□ -1.06
SDF2-202ENST00000585428 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.06
SDF2-202ENST00000585428 G0S2P27469 103 aa8.4□□□□□ -1.06
SDF2-202ENST00000585428 TOMM6Q96B49 74 aa8.4□□□□□ -1.06
SDF2-202ENST00000585428 SMIM1B2RUZ4 78 aa8.39□□□□□ -1.07
SDF2-202ENST00000585428 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
SDF2-202ENST00000585428 PDZD11Q5EBL8 140 aa8.39□□□□□ -1.07
SDF2-202ENST00000585428 GAGE10A6NGK3 116 aa8.38□□□□□ -1.07
SDF2-202ENST00000585428 CTAG1AP78358 180 aa8.38□□□□□ -1.07
SDF2-202ENST00000585428 ERASQ7Z444 233 aa8.38□□□□□ -1.07
SDF2-202ENST00000585428 RETNLBQ9BQ08 111 aa8.38□□□□□ -1.07
SDF2-202ENST00000585428 IGLV5-45A0A087WSX0 123 aa8.37□□□□□ -1.07
SDF2-202ENST00000585428 TINCRA0A1B0GVN0 87 aa8.37□□□□□ -1.07
SDF2-202ENST00000585428 TPRXLQ17RH7 258 aa8.37□□□□□ -1.07
SDF2-202ENST00000585428 COX7B2Q8TF08 81 aa8.37□□□□□ -1.07
SDF2-202ENST00000585428 MT-ND4LP03901 98 aa8.36□□□□□ -1.07
SDF2-202ENST00000585428 UBE2AP49459 152 aa8.36□□□□□ -1.07
SDF2-202ENST00000585428 RAB5BP61020 215 aa8.36□□□□□ -1.07
SDF2-202ENST00000585428 PNRC1Q12796 327 aaPredicted RBP8.36□□□□□ -1.07
SDF2-202ENST00000585428 LINC00304Q8N9R0 145 aa8.36□□□□□ -1.07
SDF2-202ENST00000585428 ADCYAP1P18509 176 aa8.35□□□□□ -1.07
SDF2-202ENST00000585428 SCGB3A1Q96QR1 104 aa8.35□□□□□ -1.07
SDF2-202ENST00000585428 IGLV7-46A0A075B6I9 117 aa8.34□□□□□ -1.07
SDF2-202ENST00000585428 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
SDF2-202ENST00000585428 A0A1B0GVG6 124 aa8.34□□□□□ -1.07
SDF2-202ENST00000585428 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
SDF2-202ENST00000585428 CST9LQ9H4G1 147 aa8.34□□□□□ -1.07
SDF2-202ENST00000585428 NKAPP1Q8N9T2 125 aa8.33□□□□□ -1.08
SDF2-202ENST00000585428 IGKV2D-26A0A0A0MRZ7 120 aa8.32□□□□□ -1.08
SDF2-202ENST00000585428 LINC01546A6NGU7 62 aa8.32□□□□□ -1.08
SDF2-202ENST00000585428 SCO1O75880 301 aa8.32□□□□□ -1.08
SDF2-202ENST00000585428 KIAA1644Q3SXP7 199 aa8.32□□□□□ -1.08
SDF2-202ENST00000585428 IGKV2-28A0A075B6P5 120 aa8.31□□□□□ -1.08
SDF2-202ENST00000585428 IGKV2D-28P01615 120 aa8.31□□□□□ -1.08
SDF2-202ENST00000585428 SPINK8P0C7L1 97 aa8.31□□□□□ -1.08
SDF2-202ENST00000585428 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
SDF2-202ENST00000585428 LINC01549A6NIU2 74 aa8.3□□□□□ -1.08
SDF2-202ENST00000585428 VPREB1P12018 145 aa8.29□□□□□ -1.08
SDF2-202ENST00000585428 PRLHP81277 87 aa8.29□□□□□ -1.08
SDF2-202ENST00000585428 TMEM126AQ9H061 195 aa8.29□□□□□ -1.08
SDF2-202ENST00000585428 ATP5LO75964 103 aa8.28□□□□□ -1.08
SDF2-202ENST00000585428 PMVKQ15126 192 aa8.28□□□□□ -1.08
SDF2-202ENST00000585428 FAM19A1Q7Z5A9 133 aa8.28□□□□□ -1.08
SDF2-202ENST00000585428 PPDPFQ9H3Y8 114 aa8.28□□□□□ -1.08
SDF2-202ENST00000585428 MUC17Q685J3 4493 aa8.27□□□□□ -1.08
SDF2-202ENST00000585428 TMEM238C9JI98 176 aa8.27□□□□□ -1.09
SDF2-202ENST00000585428 M0R378 163 aa8.27□□□□□ -1.09
SDF2-202ENST00000585428 PFN2P35080 140 aa8.27□□□□□ -1.09
SDF2-202ENST00000585428 IGLV5-39A0A0G2JS06 123 aa8.26□□□□□ -1.09
SDF2-202ENST00000585428 C3orf22Q8N5N4 141 aa8.26□□□□□ -1.09
SDF2-202ENST00000585428 SND1-IT1Q9HBX3 110 aa8.26□□□□□ -1.09
SDF2-202ENST00000585428 H3BRM9 83 aa8.25□□□□□ -1.09
SDF2-202ENST00000585428 COX17Q14061 63 aa8.25□□□□□ -1.09
SDF2-202ENST00000585428 SPAG11AQ6PDA7 123 aa8.25□□□□□ -1.09
SDF2-202ENST00000585428 Q8NDZ9 215 aa8.25□□□□□ -1.09
SDF2-202ENST00000585428 GNB1LQ9BYB4 327 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms