RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 TRAPPC2P0DI81 140 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 TRAPPC2BP0DI82 140 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 HTN1P15515 57 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 ZNF22P17026 224 aaPredicted RBP1.27□□□□□ -2.21
VAPA-208ENST00000584796 ZNF25P17030 456 aaPredicted RBP1.27□□□□□ -2.21
VAPA-208ENST00000584796 EIF2B2P49770 351 aaKnown RBP1.27□□□□□ -2.21
VAPA-208ENST00000584796 FXYD2P54710 66 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 PPP3R1P63098 170 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 TMEM14EPQ6UXP3 125 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 DPPA3Q6W0C5 159 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 PHF5AQ7RTV0 110 aaKnown RBP1.27□□□□□ -2.21
VAPA-208ENST00000584796 OR8I2Q8N0Y5 310 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 ACBD7Q8N6N7 88 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 C1orf64Q8NEQ6 169 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 ZC2HC1AQ96GY0 325 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 IMMP2LQ96T52 175 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 S100A13Q99584 98 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 GINS4Q9BRT9 223 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 TCEAL7Q9BRU2 100 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 MRPL32Q9BYC8 188 aaKnown RBP1.27□□□□□ -2.21
VAPA-208ENST00000584796 BET1LQ9NYM9 111 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 OR5AC2Q9NZP5 309 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 NAT8BQ9UHF3 227 aa1.27□□□□□ -2.21
VAPA-208ENST00000584796 TRAV7A0A075B6U4 112 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 A0A0D9SG52 128 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 TRBV10-2A0A0K0K1G8 114 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 LOC107984640A0A0U1RRK4 108 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 TCRBV3S1A0A5B6 114 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 C7orf71A4D174 169 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 FAM25AB3EWG3 89 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 FAM25CB3EWG5 89 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 FAM25GB3EWG6 89 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 GABARAPH6UMI1 98 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 TMEM256-PLSCR3K7ERE1 68 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 GNGT2O14610 69 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 GNG7O60262 68 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 DPM2O94777 84 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 IGHV3-30P01768 117 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 IGHV3-33P01772 117 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 IGLC1P0CG04 106 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 IGHV3-30-5P0DP03 117 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 RNASE2P10153 161 aaKnown RBP1.26□□□□□ -2.21
VAPA-208ENST00000584796 RNASE4P34096 147 aaKnown RBP1.26□□□□□ -2.21
VAPA-208ENST00000584796 SDC2P34741 201 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 AQP4P55087 323 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 NDUFA6P56556 154 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 NCS1P62166 190 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 RPS25P62851 125 aaKnown RBP1.26□□□□□ -2.21
VAPA-208ENST00000584796 OCIAD2Q56VL3 154 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 KHDC3LQ587J8 217 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 RNASE10Q5GAN6 216 aaKnown RBP1.26□□□□□ -2.21
VAPA-208ENST00000584796 EIF5AL1Q6IS14 154 aaKnown RBP1.26□□□□□ -2.21
VAPA-208ENST00000584796 FOXI2Q6ZQN5 318 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 ZNF818PQ6ZRF7 136 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 TCTE3Q8IZS6 198 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 Q8NDZ9 215 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 PRADC1Q9BSG0 188 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 ZNF471Q9BX82 626 aaPredicted RBP1.26□□□□□ -2.21
VAPA-208ENST00000584796 FXYD6Q9H0Q3 95 aa1.26□□□□□ -2.21
VAPA-208ENST00000584796 MRPL16Q9NX20 251 aaKnown RBP1.26□□□□□ -2.21
VAPA-208ENST00000584796 NHP2Q9NX24 153 aaKnown RBP1.26□□□□□ -2.21
VAPA-208ENST00000584796 IGHV1-58A0A0C4DH39 117 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 IBA57-AS1B1ANH7 110 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 H7C2G1 150 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 K7ERU9 68 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 NCR2O95944 276 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 CD2P06729 351 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 CXCL1P09341 107 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 SFTA3P0C7M3 94 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 METTL15P1P0C7V9 234 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 IGLC6P0CF74 106 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 LINC00694P0DN24 101 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 RPL35P42766 123 aaKnown RBP1.25□□□□□ -2.21
VAPA-208ENST00000584796 RAB5CP51148 216 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 TMBIM6P55061 237 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 FXYD4P59646 89 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 SUPT4H1P63272 117 aaKnown RBP1.25□□□□□ -2.21
VAPA-208ENST00000584796 HBBP68871 147 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 ZNF90Q03938 601 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 MSMO1Q15800 293 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 KRTAP19-2Q3LHN2 52 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 PRR9Q5T870 116 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 TMEM91Q6ZNR0 172 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 LSM10Q969L4 123 aaKnown RBP1.25□□□□□ -2.21
VAPA-208ENST00000584796 TP53RKQ96S44 253 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 NPCDR1Q9BY65 106 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 SMIM3Q9BZL3 60 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 PSORS1C2Q9UIG4 136 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 TNFSF18Q9UNG2 199 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 HHLA3Q9XRX5 114 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 LY96Q9Y6Y9 160 aa1.25□□□□□ -2.21
VAPA-208ENST00000584796 IGHV3-64A0A075B6Q5 118 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 TRGV1A0A0A0MS02 117 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 LOC100130705A0A1B0GUX0 176 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 ZNF727A8MUV8 499 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 H3BNG1 76 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 HIST1H2BKO60814 126 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 MT-ND4LP03901 98 aa1.24□□□□□ -2.21
VAPA-208ENST00000584796 HIST1H2BJP06899 126 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms