RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
SCN4A-203ENST00000584310 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
SCN4A-203ENST00000584310 F8VRH5 84 aa9.3□□□□□ -0.92
SCN4A-203ENST00000584310 ATP5LO75964 103 aa9.3□□□□□ -0.92
SCN4A-203ENST00000584310 HBDP02042 147 aa9.3□□□□□ -0.92
SCN4A-203ENST00000584310 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
SCN4A-203ENST00000584310 PDZD11Q5EBL8 140 aa9.3□□□□□ -0.92
SCN4A-203ENST00000584310 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
SCN4A-203ENST00000584310 C2orf82Q6UX34 121 aa9.3□□□□□ -0.92
SCN4A-203ENST00000584310 CST9LQ9H4G1 147 aa9.3□□□□□ -0.92
SCN4A-203ENST00000584310 A0A1W2PNN7 141 aa9.29□□□□□ -0.92
SCN4A-203ENST00000584310 UBE2BP63146 152 aa9.29□□□□□ -0.92
SCN4A-203ENST00000584310 HNRNPA3P51991 378 aaKnown RBP9.28□□□□□ -0.92
SCN4A-203ENST00000584310 FAM19A5Q7Z5A7 132 aaPredicted RBP9.28□□□□□ -0.92
SCN4A-203ENST00000584310 C18orf32Q8TCD1 76 aa9.28□□□□□ -0.92
SCN4A-203ENST00000584310 VPS13BQ7Z7G8 4022 aa9.28□□□□□ -0.92
SCN4A-203ENST00000584310 COX7B2Q8TF08 81 aa9.27□□□□□ -0.93
SCN4A-203ENST00000584310 C1orf137Q5JT78 98 aa9.26□□□□□ -0.93
SCN4A-203ENST00000584310 M0QXV9 152 aa9.25□□□□□ -0.93
SCN4A-203ENST00000584310 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
SCN4A-203ENST00000584310 PHF5AQ7RTV0 110 aaKnown RBP9.25□□□□□ -0.93
SCN4A-203ENST00000584310 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
SCN4A-203ENST00000584310 SMIM1B2RUZ4 78 aa9.24□□□□□ -0.93
SCN4A-203ENST00000584310 CHCHD1Q96BP2 118 aaKnown RBP9.24□□□□□ -0.93
SCN4A-203ENST00000584310 SPINK8P0C7L1 97 aa9.23□□□□□ -0.93
SCN4A-203ENST00000584310 SFTA2Q6UW10 78 aa9.23□□□□□ -0.93
SCN4A-203ENST00000584310 PSORS1C2Q9UIG4 136 aa9.23□□□□□ -0.93
SCN4A-203ENST00000584310 MYCBP2O75592 4640 aa9.23□□□□□ -0.93
SCN4A-203ENST00000584310 BAGE3Q86Y29 109 aa9.22□□□□□ -0.93
SCN4A-203ENST00000584310 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
SCN4A-203ENST00000584310 HSBP1O75506 76 aa9.21□□□□□ -0.94
SCN4A-203ENST00000584310 IGLC3P0DOY3 106 aa9.21□□□□□ -0.94
SCN4A-203ENST00000584310 DIRC1Q969H9 104 aa9.21□□□□□ -0.94
SCN4A-203ENST00000584310 PMCHL1Q16048 86 aa9.2□□□□□ -0.94
SCN4A-203ENST00000584310 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
SCN4A-203ENST00000584310 LINC01600Q96MT4 127 aa9.19□□□□□ -0.94
SCN4A-203ENST00000584310 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
SCN4A-203ENST00000584310 IGLV7-43P04211 117 aa9.18□□□□□ -0.94
SCN4A-203ENST00000584310 C9orf129Q5T035 196 aaKnown RBP9.18□□□□□ -0.94
SCN4A-203ENST00000584310 PLA2G2DQ9UNK4 145 aa9.18□□□□□ -0.94
SCN4A-203ENST00000584310 CHTOPQ9Y3Y2 248 aaKnown RBP9.18□□□□□ -0.94
SCN4A-203ENST00000584310 SRSF9Q13242 221 aaKnown RBP eCLIP9.17□□□□□ -0.94
SCN4A-203ENST00000584310 CBLN2Q8IUK8 224 aa9.17□□□□□ -0.94
SCN4A-203ENST00000584310 NKAPP1Q8N9T2 125 aa9.17□□□□□ -0.94
SCN4A-203ENST00000584310 IFI27L1Q96BM0 104 aa9.17□□□□□ -0.94
SCN4A-203ENST00000584310 A0A096LNJ9 63 aa9.16□□□□□ -0.94
SCN4A-203ENST00000584310 NUPR1O60356 82 aa9.16□□□□□ -0.94
SCN4A-203ENST00000584310 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
SCN4A-203ENST00000584310 ODF1Q14990 250 aa9.16□□□□□ -0.94
SCN4A-203ENST00000584310 URB1-AS1Q96HZ7 61 aa9.16□□□□□ -0.94
SCN4A-203ENST00000584310 TP73-AS1Q9UF72 201 aa9.16□□□□□ -0.94
SCN4A-203ENST00000584310 C22orf24Q9Y442 160 aa9.16□□□□□ -0.94
SCN4A-203ENST00000584310 COX17Q14061 63 aa9.15□□□□□ -0.94
SCN4A-203ENST00000584310 MRPL55Q7Z7F7 128 aaKnown RBP9.15□□□□□ -0.94
SCN4A-203ENST00000584310 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
SCN4A-203ENST00000584310 ATP6V1G1O75348 118 aa9.14□□□□□ -0.95
SCN4A-203ENST00000584310 PFN2P35080 140 aa9.14□□□□□ -0.95
SCN4A-203ENST00000584310 YPEL4Q96NS1 127 aa9.14□□□□□ -0.95
SCN4A-203ENST00000584310 HERC1Q15751 4861 aa9.14□□□□□ -0.95
SCN4A-203ENST00000584310 IGLV5-39A0A0G2JS06 123 aa9.13□□□□□ -0.95
SCN4A-203ENST00000584310 TRGC2P03986 189 aa9.13□□□□□ -0.95
SCN4A-203ENST00000584310 C11orf86A6NJI1 115 aa9.12□□□□□ -0.95
SCN4A-203ENST00000584310 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
SCN4A-203ENST00000584310 RPL24P83731 157 aaKnown RBP9.12□□□□□ -0.95
SCN4A-203ENST00000584310 HSPB8Q9UJY1 196 aa9.12□□□□□ -0.95
SCN4A-203ENST00000584310 ERG28Q9UKR5 140 aa9.12□□□□□ -0.95
SCN4A-203ENST00000584310 LINC00587B1AMM8 73 aa9.11□□□□□ -0.95
SCN4A-203ENST00000584310 H0Y9J4 135 aa9.11□□□□□ -0.95
SCN4A-203ENST00000584310 MT1HL1P0DM35 61 aa9.11□□□□□ -0.95
SCN4A-203ENST00000584310 SLC7A5P1Q8MH63 180 aa9.11□□□□□ -0.95
SCN4A-203ENST00000584310 H0Y8G0 127 aa9.1□□□□□ -0.95
SCN4A-203ENST00000584310 RPL28P46779 137 aaKnown RBP9.1□□□□□ -0.95
SCN4A-203ENST00000584310 FAM19A2Q8N3H0 131 aa9.09□□□□□ -0.95
SCN4A-203ENST00000584310 ZNF861PO60384 105 aa9.08□□□□□ -0.96
SCN4A-203ENST00000584310 LINC00158P58513 81 aa9.08□□□□□ -0.96
SCN4A-203ENST00000584310 ZNF625Q96I27 306 aaPredicted RBP9.08□□□□□ -0.96
SCN4A-203ENST00000584310 PLNP26678 52 aa9.07□□□□□ -0.96
SCN4A-203ENST00000584310 RPL13AP40429 203 aaKnown RBP9.07□□□□□ -0.96
SCN4A-203ENST00000584310 HERVK_113P61574 105 aa9.07□□□□□ -0.96
SCN4A-203ENST00000584310 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
SCN4A-203ENST00000584310 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
SCN4A-203ENST00000584310 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
SCN4A-203ENST00000584310 IGLV1-50A0A075B6I6 118 aa9.06□□□□□ -0.96
SCN4A-203ENST00000584310 TMEM223A0PJW6 202 aa9.06□□□□□ -0.96
SCN4A-203ENST00000584310 GAGE10A6NGK3 116 aa9.06□□□□□ -0.96
SCN4A-203ENST00000584310 BCE1O60756 84 aa9.06□□□□□ -0.96
SCN4A-203ENST00000584310 SERF1AO75920 110 aa9.06□□□□□ -0.96
SCN4A-203ENST00000584310 UBE2AP49459 152 aa9.06□□□□□ -0.96
SCN4A-203ENST00000584310 HERV-K104P63124 156 aa9.06□□□□□ -0.96
SCN4A-203ENST00000584310 LINC00167Q96N53 147 aa9.06□□□□□ -0.96
SCN4A-203ENST00000584310 IGLV5-37A0A075B6J1 123 aa9.05□□□□□ -0.96
SCN4A-203ENST00000584310 RPL37AP8A6NKH3 93 aa9.05□□□□□ -0.96
SCN4A-203ENST00000584310 SND1-IT1Q9HBX3 110 aa9.05□□□□□ -0.96
SCN4A-203ENST00000584310 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
SCN4A-203ENST00000584310 KRTAP10-8P60410 259 aa9.04□□□□□ -0.96
SCN4A-203ENST00000584310 S100A12P80511 92 aa9.04□□□□□ -0.96
SCN4A-203ENST00000584310 KRTAP11-1Q8IUC1 163 aa9.04□□□□□ -0.96
SCN4A-203ENST00000584310 LRP1Q07954 4544 aaKnown RBP9.04□□□□□ -0.96
SCN4A-203ENST00000584310 FABP4P15090 132 aa9.03□□□□□ -0.96
SCN4A-203ENST00000584310 COLCA2A8K830 154 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms