RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 EIF5AP63241 154 aaKnown RBP3.28□□□□□ -1.88
VAPA-207ENST00000583879 MEF2BQ02080 365 aaPredicted RBP3.28□□□□□ -1.88
VAPA-207ENST00000583879 JOSD1Q15040 202 aaPredicted RBP3.28□□□□□ -1.88
VAPA-207ENST00000583879 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 RASL11AQ6T310 242 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 BAGE2Q86Y30 109 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 NUP35Q8NFH5 326 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 PGLYRP4Q96LB8 373 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 AP1S3Q96PC3 154 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 MED28Q9H204 178 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 GVQW2A0A096LPI5 108 aaPredicted RBP3.27□□□□□ -1.89
VAPA-207ENST00000583879 IGKV3OR2-268A0A0C4DH90 116 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 MGPP08493 103 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 NDUFA6P56556 154 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 DEFA1P59665 94 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 EIF5AL1Q6IS14 154 aaKnown RBP3.27□□□□□ -1.89
VAPA-207ENST00000583879 TMUB2Q71RG4 321 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 SVBPQ8N300 66 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 ZNF664Q8N3J9 261 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 FER1L6-AS1Q8NA97 138 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 CHCHD10Q8WYQ3 142 aaPredicted RBP3.27□□□□□ -1.89
VAPA-207ENST00000583879 SPANXDQ9BXN6 97 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 GNB1LQ9BYB4 327 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 CYSLTR1Q9Y271 337 aa3.27□□□□□ -1.89
VAPA-207ENST00000583879 A0A1B0GWB2 263 aa3.26□□□□□ -1.89
VAPA-207ENST00000583879 MT-ND4LP03901 98 aa3.26□□□□□ -1.89
VAPA-207ENST00000583879 CACNG7P62955 275 aa3.26□□□□□ -1.89
VAPA-207ENST00000583879 PAPPA-AS1Q5QFB9 102 aa3.26□□□□□ -1.89
VAPA-207ENST00000583879 SCGB1D4Q6XE38 83 aa3.26□□□□□ -1.89
VAPA-207ENST00000583879 PSORS1C2Q9UIG4 136 aa3.26□□□□□ -1.89
VAPA-207ENST00000583879 IGHV1-58A0A0C4DH39 117 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 A0A1W2PNN7 141 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 F2Z2F3 143 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 H7C423 109 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 BCL2L11O43521 198 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 DPM2O94777 84 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 APOC3P02656 99 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 IGLC6P0CF74 106 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 BCL2P10415 239 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 AMMECR1LQ6DCA0 310 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 HRCT1Q6UXD1 115 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 MIEN1Q9BRT3 115 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 CYTL1Q9NRR1 136 aa3.25□□□□□ -1.89
VAPA-207ENST00000583879 MUC2Q02817 5179 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 FXYD6-FXYD2A0A087WZ82 144 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 A0A1B0GXF2 115 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 NCR2O95944 276 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 TRGC1P0CF51 173 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 XCL1P47992 114 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 SYCNQ0VAF6 134 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 PEA15Q15121 130 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 ANKRD29Q8N6D5 301 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 OR10D4PQ8NGN7 298 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 LINC00526Q96FQ7 95 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 CARD19Q96LW7 228 aa3.24□□□□□ -1.89
VAPA-207ENST00000583879 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.23□□□□□ -1.89
VAPA-207ENST00000583879 LOC107984640A0A0U1RRK4 108 aa3.23□□□□□ -1.89
VAPA-207ENST00000583879 LINC00959A0A1B0GUT2 108 aa3.23□□□□□ -1.89
VAPA-207ENST00000583879 IGKV2-29A2NJV5 120 aaPredicted RBP3.23□□□□□ -1.89
VAPA-207ENST00000583879 C19orf71A6NCJ1 209 aa3.23□□□□□ -1.89
VAPA-207ENST00000583879 C8orf87E5RJ46 101 aa3.23□□□□□ -1.89
VAPA-207ENST00000583879 MT-ND6P03923 174 aa3.23□□□□□ -1.89
VAPA-207ENST00000583879 C1orf137Q5JT78 98 aa3.23□□□□□ -1.89
VAPA-207ENST00000583879 LYZL1Q6UWQ5 148 aa3.23□□□□□ -1.89
VAPA-207ENST00000583879 KCNRGQ8N5I3 272 aa3.23□□□□□ -1.89
VAPA-207ENST00000583879 SMCO4Q9NRQ5 59 aa3.23□□□□□ -1.89
VAPA-207ENST00000583879 IGLV4-69A0A075B6H9 119 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 COLCA2A8K830 154 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 UMAD1C9J7I0 102 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 IGLV7-43P04211 117 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 KRTAP10-6P60371 365 aaPredicted RBP3.22□□□□□ -1.89
VAPA-207ENST00000583879 SS18Q15532 418 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 TWIST1Q15672 202 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 PRR4Q16378 134 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 C9orf116Q5BN46 136 aaPredicted RBP3.22□□□□□ -1.89
VAPA-207ENST00000583879 CENPWQ5EE01 88 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 MEIG1Q5JSS6 88 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 LYRM7Q5U5X0 104 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 Q5XG85 94 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 Q6ZN92 141 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 Q8N9P0 234 aaPredicted RBP3.22□□□□□ -1.89
VAPA-207ENST00000583879 FAM213BQ8TBF2 198 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 DIRC1Q969H9 104 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 TMEM191AQ9H0A3 160 aa3.22□□□□□ -1.89
VAPA-207ENST00000583879 IGLV1-50A0A075B6I6 118 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 IGHV3OR16-9A0A0B4J2B5 98 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 G3V3Q6 166 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 I3L3M4 83 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 J3QQQ9 107 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 APOMO95445 188 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 APCSP02743 223 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 CCL20P78556 96 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 C10orf91Q5T1B1 145 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 Q6Q795 121 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 PHF5AQ7RTV0 110 aaKnown RBP3.21□□□□□ -1.9
VAPA-207ENST00000583879 C11orf52Q96A22 123 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 RPL39LQ96EH5 51 aaKnown RBP3.21□□□□□ -1.9
VAPA-207ENST00000583879 C2orf48Q96LS8 159 aa3.21□□□□□ -1.9
VAPA-207ENST00000583879 CNFNQ9BYD5 112 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms