RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 COX6A2Q02221 97 aa13.24□□□□□ -0.29
SRSF1-206ENST00000583741 TMEM170BQ5T4T1 132 aa13.24□□□□□ -0.29
SRSF1-206ENST00000583741 TRAV8-4A0A0B4J246 113 aa13.23□□□□□ -0.29
SRSF1-206ENST00000583741 ZNF22P17026 224 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-206ENST00000583741 LINC00469Q8N7U9 141 aa13.23□□□□□ -0.29
SRSF1-206ENST00000583741 IGLV5-45A0A087WSX0 123 aa13.23□□□□□ -0.29
SRSF1-206ENST00000583741 XCL1P47992 114 aa13.23□□□□□ -0.29
SRSF1-206ENST00000583741 CHCHD10Q8WYQ3 142 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-206ENST00000583741 hDV102S1A0JD36 115 aa13.22□□□□□ -0.29
SRSF1-206ENST00000583741 HSBP1L1C9JCN9 74 aa13.22□□□□□ -0.29
SRSF1-206ENST00000583741 VAMP8Q9BV40 100 aa13.22□□□□□ -0.29
SRSF1-206ENST00000583741 CDKN2A-AS1Q9UH64 79 aa13.22□□□□□ -0.29
SRSF1-206ENST00000583741 RPL37AP61513 92 aaKnown RBP13.21□□□□□ -0.3
SRSF1-206ENST00000583741 MAJINQ3KP22 176 aa13.21□□□□□ -0.3
SRSF1-206ENST00000583741 C12orf57Q99622 126 aa13.21□□□□□ -0.3
SRSF1-206ENST00000583741 S100A12P80511 92 aa13.2□□□□□ -0.3
SRSF1-206ENST00000583741 CD164L2Q6UWJ8 174 aa13.2□□□□□ -0.3
SRSF1-206ENST00000583741 STPG4Q8N801 248 aa13.2□□□□□ -0.3
SRSF1-206ENST00000583741 IGHV3OR16-9A0A0B4J2B5 98 aa13.19□□□□□ -0.3
SRSF1-206ENST00000583741 H3BRM9 83 aa13.19□□□□□ -0.3
SRSF1-206ENST00000583741 LINC00518Q8N0U6 118 aa13.19□□□□□ -0.3
SRSF1-206ENST00000583741 C1orf43Q9BWL3 253 aa13.18□□□□□ -0.3
SRSF1-206ENST00000583741 PAM16Q9Y3D7 125 aa13.18□□□□□ -0.3
SRSF1-206ENST00000583741 TMEM223A0PJW6 202 aa13.17□□□□□ -0.3
SRSF1-206ENST00000583741 HERVK_113P61574 105 aa13.17□□□□□ -0.3
SRSF1-206ENST00000583741 C14orf177Q52M58 125 aa13.17□□□□□ -0.3
SRSF1-206ENST00000583741 GAGE12HA6NDE8 117 aa13.16□□□□□ -0.3
SRSF1-206ENST00000583741 RNF213Q63HN8 5207 aa13.16□□□□□ -0.3
SRSF1-206ENST00000583741 SPINK8P0C7L1 97 aa13.16□□□□□ -0.3
SRSF1-206ENST00000583741 FOXI1Q12951 378 aa13.16□□□□□ -0.3
SRSF1-206ENST00000583741 SPATA45Q537H7 98 aa13.16□□□□□ -0.3
SRSF1-206ENST00000583741 ANKRD39Q53RE8 183 aa13.16□□□□□ -0.3
SRSF1-206ENST00000583741 C5orf38Q86SI9 138 aa13.16□□□□□ -0.3
SRSF1-206ENST00000583741 A0A087WZ39 114 aa13.15□□□□□ -0.3
SRSF1-206ENST00000583741 COX7A2LO14548 114 aa13.15□□□□□ -0.3
SRSF1-206ENST00000583741 LRP2P98164 4655 aa13.14□□□□□ -0.31
SRSF1-206ENST00000583741 USP17L23D6RBM5 183 aa13.14□□□□□ -0.31
SRSF1-206ENST00000583741 MT1HL1P0DM35 61 aa13.14□□□□□ -0.31
SRSF1-206ENST00000583741 IGHV3-64A0A075B6Q5 118 aa13.13□□□□□ -0.31
SRSF1-206ENST00000583741 SMIM1B2RUZ4 78 aa13.13□□□□□ -0.31
SRSF1-206ENST00000583741 E9PLD3 99 aa13.13□□□□□ -0.31
SRSF1-206ENST00000583741 KRTAP26-1Q6PEX3 210 aa13.13□□□□□ -0.31
SRSF1-206ENST00000583741 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-206ENST00000583741 PANO1I0J062 215 aa13.12□□□□□ -0.31
SRSF1-206ENST00000583741 IGHV1-58A0A0C4DH39 117 aa13.11□□□□□ -0.31
SRSF1-206ENST00000583741 MALP21145 153 aa13.11□□□□□ -0.31
SRSF1-206ENST00000583741 NMUP48645 174 aa13.11□□□□□ -0.31
SRSF1-206ENST00000583741 LINC01561Q8N1V8 128 aa13.11□□□□□ -0.31
SRSF1-206ENST00000583741 IGKV2D-26A0A0A0MRZ7 120 aa13.1□□□□□ -0.31
SRSF1-206ENST00000583741 LEPROTO15243 131 aa13.1□□□□□ -0.31
SRSF1-206ENST00000583741 C9orf163Q8N9P6 203 aa13.1□□□□□ -0.31
SRSF1-206ENST00000583741 IGLV5-39A0A0G2JS06 123 aa13.09□□□□□ -0.31
SRSF1-206ENST00000583741 PLEKHB2Q96CS7 222 aa13.09□□□□□ -0.31
SRSF1-206ENST00000583741 APOMO95445 188 aa13.08□□□□□ -0.32
SRSF1-206ENST00000583741 J3QQQ9 107 aa13.07□□□□□ -0.32
SRSF1-206ENST00000583741 LGALS3P17931 250 aaKnown RBP13.06□□□□□ -0.32
SRSF1-206ENST00000583741 TSPEAR-AS2P59090 65 aa13.06□□□□□ -0.32
SRSF1-206ENST00000583741 TNXBP22105 4242 aa13.06□□□□□ -0.32
SRSF1-206ENST00000583741 SDIM1Q6ZPB5 146 aa13.05□□□□□ -0.32
SRSF1-206ENST00000583741 ORAOV1Q8WV07 137 aa13.05□□□□□ -0.32
SRSF1-206ENST00000583741 TOMM7Q9P0U1 55 aa13.05□□□□□ -0.32
SRSF1-206ENST00000583741 COX7B2Q8TF08 81 aa13.04□□□□□ -0.32
SRSF1-206ENST00000583741 C14orf144Q96I85 54 aa13.04□□□□□ -0.32
SRSF1-206ENST00000583741 COX8AP10176 69 aa13.04□□□□□ -0.32
SRSF1-206ENST00000583741 PCP2Q8IVA1 136 aa13.04□□□□□ -0.32
SRSF1-206ENST00000583741 TTTY13Q9BZ97 58 aa13.04□□□□□ -0.32
SRSF1-206ENST00000583741 PRO1933Q9H354 126 aa13.04□□□□□ -0.32
SRSF1-206ENST00000583741 PRSS2P07478 247 aa13.02□□□□□ -0.33
SRSF1-206ENST00000583741 Q6ZRU5 148 aa13.02□□□□□ -0.33
SRSF1-206ENST00000583741 Q8IZM0 81 aa13.02□□□□□ -0.33
SRSF1-206ENST00000583741 CFAP161Q6P656 301 aa13.01□□□□□ -0.33
SRSF1-206ENST00000583741 C15orf56Q8N910 161 aa13.01□□□□□ -0.33
SRSF1-206ENST00000583741 ZNF815PA8K554 130 aa13□□□□□ -0.33
SRSF1-206ENST00000583741 TSTD3H0UI37 97 aa13□□□□□ -0.33
SRSF1-206ENST00000583741 SPAG11BQ08648 103 aa13□□□□□ -0.33
SRSF1-206ENST00000583741 CIRBPQ14011 172 aaKnown RBP13□□□□□ -0.33
SRSF1-206ENST00000583741 SLC25A34Q6PIV7 304 aa13□□□□□ -0.33
SRSF1-206ENST00000583741 BOD1L2Q8IYS8 172 aa13□□□□□ -0.33
SRSF1-206ENST00000583741 NDUFA12Q9UI09 145 aa13□□□□□ -0.33
SRSF1-206ENST00000583741 C6orf226Q5I0X4 101 aa12.99□□□□□ -0.33
SRSF1-206ENST00000583741 TP73-AS1Q9UF72 201 aa12.99□□□□□ -0.33
SRSF1-206ENST00000583741 MYMXA0A1B0GTQ4 84 aa12.98□□□□□ -0.33
SRSF1-206ENST00000583741 KIAA0087Q14695 138 aa12.98□□□□□ -0.33
SRSF1-206ENST00000583741 NDUFA1O15239 70 aa12.97□□□□□ -0.33
SRSF1-206ENST00000583741 DLEU1O43261 78 aa12.97□□□□□ -0.33
SRSF1-206ENST00000583741 HIGD2BQ4VC39 106 aa12.97□□□□□ -0.33
SRSF1-206ENST00000583741 UQCR10Q9UDW1 63 aa12.97□□□□□ -0.33
SRSF1-206ENST00000583741 GVQW2A0A096LPI5 108 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-206ENST00000583741 ZNF561-AS1K7EIQ3 104 aa12.97□□□□□ -0.33
SRSF1-206ENST00000583741 CNBPP62633 177 aaKnown RBP12.97□□□□□ -0.33
SRSF1-206ENST00000583741 CXCL5P42830 114 aa12.96□□□□□ -0.34
SRSF1-206ENST00000583741 CKS1BP61024 79 aa12.96□□□□□ -0.34
SRSF1-206ENST00000583741 ZNF625Q96I27 306 aaPredicted RBP12.96□□□□□ -0.34
SRSF1-206ENST00000583741 CHTF8P0CG12 524 aa12.95□□□□□ -0.34
SRSF1-206ENST00000583741 SFTA2Q6UW10 78 aa12.95□□□□□ -0.34
SRSF1-206ENST00000583741 LINC00526Q96FQ7 95 aa12.95□□□□□ -0.34
SRSF1-206ENST00000583741 MIEN1Q9BRT3 115 aa12.95□□□□□ -0.34
SRSF1-206ENST00000583741 SLPIP03973 132 aa12.94□□□□□ -0.34
SRSF1-206ENST00000583741 C2orf82Q6UX34 121 aa12.94□□□□□ -0.34
SRSF1-206ENST00000583741 A0A087WYN8 130 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms