RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 NTN5Q8WTR8 489 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-228ENST00000583363 LINC00526Q96FQ7 95 aa10.71□□□□□ -0.69
CDK5RAP3-228ENST00000583363 J3QQQ9 107 aa10.7□□□□□ -0.7
CDK5RAP3-228ENST00000583363 TNP2Q05952 138 aa10.7□□□□□ -0.7
CDK5RAP3-228ENST00000583363 TSPEAR-AS2P59090 65 aa10.69□□□□□ -0.7
CDK5RAP3-228ENST00000583363 C2orf48Q96LS8 159 aa10.69□□□□□ -0.7
CDK5RAP3-228ENST00000583363 VAMP8Q9BV40 100 aa10.69□□□□□ -0.7
CDK5RAP3-228ENST00000583363 F8WDY8 70 aa10.68□□□□□ -0.7
CDK5RAP3-228ENST00000583363 SLPIP03973 132 aa10.68□□□□□ -0.7
CDK5RAP3-228ENST00000583363 PAM16Q9Y3D7 125 aa10.68□□□□□ -0.7
CDK5RAP3-228ENST00000583363 LGALS3P17931 250 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-228ENST00000583363 SPATA45Q537H7 98 aa10.67□□□□□ -0.7
CDK5RAP3-228ENST00000583363 C2orf82Q6UX34 121 aa10.67□□□□□ -0.7
CDK5RAP3-228ENST00000583363 Q8N814 137 aa10.67□□□□□ -0.7
CDK5RAP3-228ENST00000583363 CXCL5P42830 114 aa10.66□□□□□ -0.7
CDK5RAP3-228ENST00000583363 NMUP48645 174 aa10.66□□□□□ -0.7
CDK5RAP3-228ENST00000583363 CKS1BP61024 79 aa10.66□□□□□ -0.7
CDK5RAP3-228ENST00000583363 EREGO14944 169 aa10.65□□□□□ -0.7
CDK5RAP3-228ENST00000583363 S100A12P80511 92 aa10.65□□□□□ -0.7
CDK5RAP3-228ENST00000583363 C10orf25Q5T742 122 aa10.65□□□□□ -0.7
CDK5RAP3-228ENST00000583363 UNQ6190/PRO20217Q6UXQ8 127 aa10.65□□□□□ -0.7
CDK5RAP3-228ENST00000583363 LINC00518Q8N0U6 118 aa10.65□□□□□ -0.7
CDK5RAP3-228ENST00000583363 ZNF625Q96I27 306 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-228ENST00000583363 CAMK2N2Q96S95 79 aa10.65□□□□□ -0.7
CDK5RAP3-228ENST00000583363 KRTAP4-5Q9BYR2 181 aa10.65□□□□□ -0.7
CDK5RAP3-228ENST00000583363 NDUFA12Q9UI09 145 aa10.65□□□□□ -0.7
CDK5RAP3-228ENST00000583363 HSPG2P98160 4391 aa10.64□□□□□ -0.71
CDK5RAP3-228ENST00000583363 NDUFA1O15239 70 aa10.64□□□□□ -0.71
CDK5RAP3-228ENST00000583363 SYCNQ0VAF6 134 aa10.64□□□□□ -0.71
CDK5RAP3-228ENST00000583363 PCP2Q8IVA1 136 aa10.64□□□□□ -0.71
CDK5RAP3-228ENST00000583363 TTTY13Q9BZ97 58 aa10.64□□□□□ -0.71
CDK5RAP3-228ENST00000583363 MYMXA0A1B0GTQ4 84 aa10.63□□□□□ -0.71
CDK5RAP3-228ENST00000583363 CNBPP62633 177 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-228ENST00000583363 SFTA2Q6UW10 78 aa10.63□□□□□ -0.71
CDK5RAP3-228ENST00000583363 Q6ZRU5 148 aa10.63□□□□□ -0.71
CDK5RAP3-228ENST00000583363 C12orf57Q99622 126 aa10.63□□□□□ -0.71
CDK5RAP3-228ENST00000583363 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-228ENST00000583363 ZNF815PA8K554 130 aa10.61□□□□□ -0.71
CDK5RAP3-228ENST00000583363 COX8AP10176 69 aa10.61□□□□□ -0.71
CDK5RAP3-228ENST00000583363 HERV-K104P63124 156 aa10.61□□□□□ -0.71
CDK5RAP3-228ENST00000583363 RNF151Q2KHN1 245 aa10.61□□□□□ -0.71
CDK5RAP3-228ENST00000583363 C6orf48Q9UBA6 75 aa10.61□□□□□ -0.71
CDK5RAP3-228ENST00000583363 TRBV30A0A0K0K1B3 111 aa10.6□□□□□ -0.71
CDK5RAP3-228ENST00000583363 BOD1L2Q8IYS8 172 aa10.6□□□□□ -0.71
CDK5RAP3-228ENST00000583363 C14orf144Q96I85 54 aa10.6□□□□□ -0.71
CDK5RAP3-228ENST00000583363 CARD19Q96LW7 228 aa10.6□□□□□ -0.71
CDK5RAP3-228ENST00000583363 DLEU1O43261 78 aa10.59□□□□□ -0.71
CDK5RAP3-228ENST00000583363 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-228ENST00000583363 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
CDK5RAP3-228ENST00000583363 C9orf116Q5BN46 136 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-228ENST00000583363 C9orf163Q8N9P6 203 aa10.58□□□□□ -0.72
CDK5RAP3-228ENST00000583363 PGPEP1Q9NXJ5 209 aa10.57□□□□□ -0.72
CDK5RAP3-228ENST00000583363 FUSP35637 526 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDK5RAP3-228ENST00000583363 KRTAP10-2P60368 255 aa10.56□□□□□ -0.72
CDK5RAP3-228ENST00000583363 ERG28Q9UKR5 140 aa10.56□□□□□ -0.72
CDK5RAP3-228ENST00000583363 DNAH5Q8TE73 4624 aa10.55□□□□□ -0.72
CDK5RAP3-228ENST00000583363 LINC00587B1AMM8 73 aa10.55□□□□□ -0.72
CDK5RAP3-228ENST00000583363 SLC25A34Q6PIV7 304 aa10.55□□□□□ -0.72
CDK5RAP3-228ENST00000583363 LRP1BQ9NZR2 4599 aa10.54□□□□□ -0.72
CDK5RAP3-228ENST00000583363 IGLV5-52A0A0A0MRZ9 124 aa10.54□□□□□ -0.72
CDK5RAP3-228ENST00000583363 TLX1NBP0CAT3 122 aa10.54□□□□□ -0.72
CDK5RAP3-228ENST00000583363 SMIM13P0DJ93 91 aa10.54□□□□□ -0.72
CDK5RAP3-228ENST00000583363 COX17Q14061 63 aa10.54□□□□□ -0.72
CDK5RAP3-228ENST00000583363 MEIG1Q5JSS6 88 aa10.54□□□□□ -0.72
CDK5RAP3-228ENST00000583363 TP73-AS1Q9UF72 201 aa10.54□□□□□ -0.72
CDK5RAP3-228ENST00000583363 PFN2P35080 140 aa10.53□□□□□ -0.72
CDK5RAP3-228ENST00000583363 SCGB1D4Q6XE38 83 aa10.53□□□□□ -0.72
CDK5RAP3-228ENST00000583363 PRO1933Q9H354 126 aa10.53□□□□□ -0.72
CDK5RAP3-228ENST00000583363 TIMM17BO60830 172 aa10.52□□□□□ -0.73
CDK5RAP3-228ENST00000583363 LINC00158P58513 81 aa10.52□□□□□ -0.73
CDK5RAP3-228ENST00000583363 CIRBPQ14011 172 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-228ENST00000583363 A0A0U1RRA0 63 aa10.51□□□□□ -0.73
CDK5RAP3-228ENST00000583363 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
CDK5RAP3-228ENST00000583363 NDUFC2-KCTD14E9PQ53 114 aa10.51□□□□□ -0.73
CDK5RAP3-228ENST00000583363 ADAMTSL4-AS1Q5T5F5 129 aa10.51□□□□□ -0.73
CDK5RAP3-228ENST00000583363 SDIM1Q6ZPB5 146 aa10.51□□□□□ -0.73
CDK5RAP3-228ENST00000583363 LITAFQ99732 161 aa10.51□□□□□ -0.73
CDK5RAP3-228ENST00000583363 UQCR10Q9UDW1 63 aa10.51□□□□□ -0.73
CDK5RAP3-228ENST00000583363 LINC01620Q4KN68 170 aa10.5□□□□□ -0.73
CDK5RAP3-228ENST00000583363 Q6ZRP5 223 aa10.5□□□□□ -0.73
CDK5RAP3-228ENST00000583363 DNAH8Q96JB1 4490 aa10.49□□□□□ -0.73
CDK5RAP3-228ENST00000583363 MIEN1Q9BRT3 115 aa10.49□□□□□ -0.73
CDK5RAP3-228ENST00000583363 HIGD1BQ9P298 99 aa10.49□□□□□ -0.73
CDK5RAP3-228ENST00000583363 APOBP04114 4563 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-228ENST00000583363 C2orf91Q6ZV80 131 aa10.48□□□□□ -0.73
CDK5RAP3-228ENST00000583363 MIR7-3HGQ8N6C7 128 aa10.48□□□□□ -0.73
CDK5RAP3-228ENST00000583363 TMEM238C9JI98 176 aa10.47□□□□□ -0.73
CDK5RAP3-228ENST00000583363 GCSHP23434 173 aa10.47□□□□□ -0.73
CDK5RAP3-228ENST00000583363 RPL18AQ02543 176 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-228ENST00000583363 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
CDK5RAP3-228ENST00000583363 DAND5Q8N907 189 aa10.47□□□□□ -0.73
CDK5RAP3-228ENST00000583363 PKIGQ9Y2B9 76 aa10.47□□□□□ -0.73
CDK5RAP3-228ENST00000583363 C16orf90A8MZG2 172 aa10.46□□□□□ -0.73
CDK5RAP3-228ENST00000583363 CDK2AP2O75956 126 aa10.46□□□□□ -0.73
CDK5RAP3-228ENST00000583363 GAGE2EQ4V326 116 aa10.46□□□□□ -0.73
CDK5RAP3-228ENST00000583363 SPANXDQ9BXN6 97 aa10.46□□□□□ -0.73
CDK5RAP3-228ENST00000583363 SND1-IT1Q9HBX3 110 aa10.46□□□□□ -0.73
CDK5RAP3-228ENST00000583363 SPANXB1Q9NS25 103 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-228ENST00000583363 SPANXCQ9NY87 97 aa10.46□□□□□ -0.73
CDK5RAP3-228ENST00000583363 GAGE2DQ9UEU5 116 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms