RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 F8WDY8 70 aa9.69□□□□□ -0.86
SENP3-208ENST00000583277 TMEM238C9JI98 176 aa9.68□□□□□ -0.86
SENP3-208ENST00000583277 USP17L23D6RBM5 183 aa9.68□□□□□ -0.86
SENP3-208ENST00000583277 TIMM17BO60830 172 aa9.68□□□□□ -0.86
SENP3-208ENST00000583277 KMT2AQ03164 3969 aa9.68□□□□□ -0.86
SENP3-208ENST00000583277 LINC00587B1AMM8 73 aa9.67□□□□□ -0.86
SENP3-208ENST00000583277 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
SENP3-208ENST00000583277 HIGD2BQ4VC39 106 aa9.67□□□□□ -0.86
SENP3-208ENST00000583277 C6orf223Q8N319 242 aa9.67□□□□□ -0.86
SENP3-208ENST00000583277 NTN5Q8WTR8 489 aaPredicted RBP9.67□□□□□ -0.86
SENP3-208ENST00000583277 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
SENP3-208ENST00000583277 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
SENP3-208ENST00000583277 Q6ZRN7 208 aaPredicted RBP9.67□□□□□ -0.86
SENP3-208ENST00000583277 C14orf177Q52M58 125 aa9.66□□□□□ -0.86
SENP3-208ENST00000583277 MEIG1Q5JSS6 88 aa9.66□□□□□ -0.86
SENP3-208ENST00000583277 SPANXB1Q9NS25 103 aaPredicted RBP9.66□□□□□ -0.86
SENP3-208ENST00000583277 DNAH10Q8IVF4 4471 aa9.66□□□□□ -0.86
SENP3-208ENST00000583277 CTAG1AP78358 180 aa9.65□□□□□ -0.86
SENP3-208ENST00000583277 HSD52Q0P140 79 aa9.65□□□□□ -0.86
SENP3-208ENST00000583277 TAL2Q16559 108 aa9.65□□□□□ -0.86
SENP3-208ENST00000583277 CAMK2N2Q96S95 79 aa9.65□□□□□ -0.86
SENP3-208ENST00000583277 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
SENP3-208ENST00000583277 LINC00526Q96FQ7 95 aa9.64□□□□□ -0.87
SENP3-208ENST00000583277 TRBV30A0A0K0K1B3 111 aa9.63□□□□□ -0.87
SENP3-208ENST00000583277 SRSF9Q13242 221 aaKnown RBP eCLIP9.63□□□□□ -0.87
SENP3-208ENST00000583277 Q6ZVH6 145 aa9.63□□□□□ -0.87
SENP3-208ENST00000583277 HIST1H4GQ99525 98 aa9.63□□□□□ -0.87
SENP3-208ENST00000583277 LITAFQ99732 161 aa9.63□□□□□ -0.87
SENP3-208ENST00000583277 ERG28Q9UKR5 140 aa9.63□□□□□ -0.87
SENP3-208ENST00000583277 COX17Q14061 63 aa9.63□□□□□ -0.87
SENP3-208ENST00000583277 UNQ6190/PRO20217Q6UXQ8 127 aa9.63□□□□□ -0.87
SENP3-208ENST00000583277 SPANXDQ9BXN6 97 aa9.63□□□□□ -0.87
SENP3-208ENST00000583277 SPANXCQ9NY87 97 aa9.63□□□□□ -0.87
SENP3-208ENST00000583277 M0R143 59 aa9.62□□□□□ -0.87
SENP3-208ENST00000583277 LECT2O14960 151 aa9.62□□□□□ -0.87
SENP3-208ENST00000583277 SMIM13P0DJ93 91 aa9.61□□□□□ -0.87
SENP3-208ENST00000583277 GCSHP23434 173 aa9.61□□□□□ -0.87
SENP3-208ENST00000583277 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
SENP3-208ENST00000583277 C10orf25Q5T742 122 aa9.61□□□□□ -0.87
SENP3-208ENST00000583277 COPS9Q8WXC6 57 aa9.61□□□□□ -0.87
SENP3-208ENST00000583277 LCE6AA0A183 80 aa9.6□□□□□ -0.87
SENP3-208ENST00000583277 LINC00158P58513 81 aa9.6□□□□□ -0.87
SENP3-208ENST00000583277 Q6ZRU5 148 aa9.6□□□□□ -0.87
SENP3-208ENST00000583277 CARD19Q96LW7 228 aa9.6□□□□□ -0.87
SENP3-208ENST00000583277 C6orf48Q9UBA6 75 aa9.6□□□□□ -0.87
SENP3-208ENST00000583277 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
SENP3-208ENST00000583277 PFN2P35080 140 aa9.59□□□□□ -0.87
SENP3-208ENST00000583277 WFDC2Q14508 124 aa9.59□□□□□ -0.87
SENP3-208ENST00000583277 ADAMTSL4-AS1Q5T5F5 129 aa9.59□□□□□ -0.87
SENP3-208ENST00000583277 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
SENP3-208ENST00000583277 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
SENP3-208ENST00000583277 IFITM1P13164 125 aa9.58□□□□□ -0.88
SENP3-208ENST00000583277 CEND1Q8N111 149 aa9.58□□□□□ -0.88
SENP3-208ENST00000583277 RNF151Q2KHN1 245 aa9.58□□□□□ -0.88
SENP3-208ENST00000583277 MIR7-3HGQ8N6C7 128 aa9.58□□□□□ -0.88
SENP3-208ENST00000583277 PPDPFQ9H3Y8 114 aa9.58□□□□□ -0.88
SENP3-208ENST00000583277 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
SENP3-208ENST00000583277 PTTG1IPP53801 180 aa9.57□□□□□ -0.88
SENP3-208ENST00000583277 CNBPP62633 177 aaKnown RBP9.57□□□□□ -0.88
SENP3-208ENST00000583277 C9orf116Q5BN46 136 aaPredicted RBP9.57□□□□□ -0.88
SENP3-208ENST00000583277 BVES-AS1Q5T3Y7 98 aa9.57□□□□□ -0.88
SENP3-208ENST00000583277 DAND5Q8N907 189 aa9.57□□□□□ -0.88
SENP3-208ENST00000583277 SACSQ9NZJ4 4579 aa9.57□□□□□ -0.88
SENP3-208ENST00000583277 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
SENP3-208ENST00000583277 TMEM238LA0A1B0GVL6 79 aa9.56□□□□□ -0.88
SENP3-208ENST00000583277 A6NJY4 79 aa9.56□□□□□ -0.88
SENP3-208ENST00000583277 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
SENP3-208ENST00000583277 A0A087WTM6 91 aa9.55□□□□□ -0.88
SENP3-208ENST00000583277 LINC00308Q8TCZ7 52 aa9.55□□□□□ -0.88
SENP3-208ENST00000583277 SLPIP03973 132 aa9.54□□□□□ -0.88
SENP3-208ENST00000583277 MUSTN1Q8IVN3 82 aa9.54□□□□□ -0.88
SENP3-208ENST00000583277 Q8N814 137 aa9.54□□□□□ -0.88
SENP3-208ENST00000583277 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
SENP3-208ENST00000583277 BATFQ16520 125 aa9.54□□□□□ -0.88
SENP3-208ENST00000583277 FRAS1Q86XX4 4008 aa9.53□□□□□ -0.88
SENP3-208ENST00000583277 EREGO14944 169 aa9.53□□□□□ -0.88
SENP3-208ENST00000583277 TLX1NBP0CAT3 122 aa9.53□□□□□ -0.88
SENP3-208ENST00000583277 FXYD2P54710 66 aa9.53□□□□□ -0.88
SENP3-208ENST00000583277 NPC2P61916 151 aa9.53□□□□□ -0.88
SENP3-208ENST00000583277 SNHG12Q9BXW3 62 aa9.53□□□□□ -0.88
SENP3-208ENST00000583277 DNAH17Q9UFH2 4485 aa9.52□□□□□ -0.88
SENP3-208ENST00000583277 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.52□□□□□ -0.89
SENP3-208ENST00000583277 A6NDN8 102 aa9.52□□□□□ -0.89
SENP3-208ENST00000583277 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
SENP3-208ENST00000583277 SOSTDC1Q6X4U4 206 aa9.51□□□□□ -0.89
SENP3-208ENST00000583277 SND1-IT1Q9HBX3 110 aa9.51□□□□□ -0.89
SENP3-208ENST00000583277 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
SENP3-208ENST00000583277 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
SENP3-208ENST00000583277 LOC107984640A0A0U1RRK4 108 aa9.5□□□□□ -0.89
SENP3-208ENST00000583277 A4D1N5 150 aa9.5□□□□□ -0.89
SENP3-208ENST00000583277 RTL8CO15255 209 aa9.5□□□□□ -0.89
SENP3-208ENST00000583277 HYDINQ4G0P3 5121 aa9.5□□□□□ -0.89
SENP3-208ENST00000583277 EIF4EBP3O60516 100 aaPredicted RBP9.49□□□□□ -0.89
SENP3-208ENST00000583277 RPL18AQ02543 176 aaKnown RBP9.49□□□□□ -0.89
SENP3-208ENST00000583277 NHP2Q9NX24 153 aaKnown RBP9.49□□□□□ -0.89
SENP3-208ENST00000583277 Q6ZRP5 223 aa9.48□□□□□ -0.89
SENP3-208ENST00000583277 TNP2Q05952 138 aa9.47□□□□□ -0.89
SENP3-208ENST00000583277 COL5A1-AS1Q5SY13 56 aa9.47□□□□□ -0.89
SENP3-208ENST00000583277 A0A0B4J2C4 111 aa9.46□□□□□ -0.89
SENP3-208ENST00000583277 A0A1B0GWB2 263 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms