RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 TMEM170BQ5T4T1 132 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 Q9HAA7 133 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 PKHD1L1Q86WI1 4243 aa5.78□□□□□ -1.48
PDLIM1P3-201ENST00000582370 GAGE12HA6NDE8 117 aa5.77□□□□□ -1.49
PDLIM1P3-201ENST00000582370 PRSS2P07478 247 aa5.77□□□□□ -1.49
PDLIM1P3-201ENST00000582370 NMUP48645 174 aa5.77□□□□□ -1.49
PDLIM1P3-201ENST00000582370 S100A12P80511 92 aa5.77□□□□□ -1.49
PDLIM1P3-201ENST00000582370 CLPSL2Q6UWE3 100 aa5.77□□□□□ -1.49
PDLIM1P3-201ENST00000582370 PLEKHB2Q96CS7 222 aa5.77□□□□□ -1.49
PDLIM1P3-201ENST00000582370 IGLV10-54A0A075B6I4 117 aa5.76□□□□□ -1.49
PDLIM1P3-201ENST00000582370 IGHV3-64A0A075B6Q5 118 aa5.76□□□□□ -1.49
PDLIM1P3-201ENST00000582370 ZNF561-AS1K7EIQ3 104 aa5.76□□□□□ -1.49
PDLIM1P3-201ENST00000582370 SMIM6P0DI80 62 aa5.76□□□□□ -1.49
PDLIM1P3-201ENST00000582370 ZNF22P17026 224 aaPredicted RBP5.76□□□□□ -1.49
PDLIM1P3-201ENST00000582370 Q8IZM0 81 aa5.76□□□□□ -1.49
PDLIM1P3-201ENST00000582370 Q8N3U1 123 aa5.76□□□□□ -1.49
PDLIM1P3-201ENST00000582370 CDKN2A-AS1Q9UH64 79 aa5.76□□□□□ -1.49
PDLIM1P3-201ENST00000582370 GVQW2A0A096LPI5 108 aaPredicted RBP5.75□□□□□ -1.49
PDLIM1P3-201ENST00000582370 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.75□□□□□ -1.49
PDLIM1P3-201ENST00000582370 TMEM223A0PJW6 202 aa5.75□□□□□ -1.49
PDLIM1P3-201ENST00000582370 E9PLD3 99 aa5.75□□□□□ -1.49
PDLIM1P3-201ENST00000582370 ZC2HC1BQ5TFG8 222 aa5.75□□□□□ -1.49
PDLIM1P3-201ENST00000582370 KRTAP26-1Q6PEX3 210 aa5.75□□□□□ -1.49
PDLIM1P3-201ENST00000582370 C2orf48Q96LS8 159 aa5.75□□□□□ -1.49
PDLIM1P3-201ENST00000582370 IGLV5-39A0A0G2JS06 123 aa5.74□□□□□ -1.49
PDLIM1P3-201ENST00000582370 SMIM1B2RUZ4 78 aa5.74□□□□□ -1.49
PDLIM1P3-201ENST00000582370 CKS1BP61024 79 aa5.74□□□□□ -1.49
PDLIM1P3-201ENST00000582370 HERV-K104P63124 156 aa5.74□□□□□ -1.49
PDLIM1P3-201ENST00000582370 C6orf226Q5I0X4 101 aa5.74□□□□□ -1.49
PDLIM1P3-201ENST00000582370 LINC00528Q8N1L1 170 aa5.74□□□□□ -1.49
PDLIM1P3-201ENST00000582370 VAMP8Q9BV40 100 aa5.74□□□□□ -1.49
PDLIM1P3-201ENST00000582370 TNXBP22105 4242 aa5.73□□□□□ -1.49
PDLIM1P3-201ENST00000582370 LEPROTO15243 131 aa5.73□□□□□ -1.49
PDLIM1P3-201ENST00000582370 LGALS3P17931 250 aaKnown RBP5.73□□□□□ -1.49
PDLIM1P3-201ENST00000582370 COX6A2Q02221 97 aa5.73□□□□□ -1.49
PDLIM1P3-201ENST00000582370 RNF151Q2KHN1 245 aa5.73□□□□□ -1.49
PDLIM1P3-201ENST00000582370 C5orf38Q86SI9 138 aa5.73□□□□□ -1.49
PDLIM1P3-201ENST00000582370 NTN5Q8WTR8 489 aaPredicted RBP5.73□□□□□ -1.49
PDLIM1P3-201ENST00000582370 ORAOV1Q8WV07 137 aa5.73□□□□□ -1.49
PDLIM1P3-201ENST00000582370 IGLV5-52A0A0A0MRZ9 124 aa5.72□□□□□ -1.49
PDLIM1P3-201ENST00000582370 TRBV30A0A0K0K1B3 111 aa5.72□□□□□ -1.49
PDLIM1P3-201ENST00000582370 MYMXA0A1B0GTQ4 84 aa5.72□□□□□ -1.49
PDLIM1P3-201ENST00000582370 LOC105371267A0A1B0GV96 52 aa5.72□□□□□ -1.49
PDLIM1P3-201ENST00000582370 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
PDLIM1P3-201ENST00000582370 NDUFA1O15239 70 aa5.72□□□□□ -1.49
PDLIM1P3-201ENST00000582370 CIRBPQ14011 172 aaKnown RBP5.72□□□□□ -1.49
PDLIM1P3-201ENST00000582370 COX17Q14061 63 aa5.72□□□□□ -1.49
PDLIM1P3-201ENST00000582370 COX7B2Q8TF08 81 aa5.72□□□□□ -1.49
PDLIM1P3-201ENST00000582370 J3QQQ9 107 aa5.71□□□□□ -1.5
PDLIM1P3-201ENST00000582370 CNBPP62633 177 aaKnown RBP5.71□□□□□ -1.5
PDLIM1P3-201ENST00000582370 SPAG11BQ08648 103 aa5.71□□□□□ -1.5
PDLIM1P3-201ENST00000582370 PYY3Q5JQD4 70 aa5.71□□□□□ -1.5
PDLIM1P3-201ENST00000582370 COPS9Q8WXC6 57 aa5.71□□□□□ -1.5
PDLIM1P3-201ENST00000582370 PMCHL2Q9BQD1 86 aa5.71□□□□□ -1.5
PDLIM1P3-201ENST00000582370 hDV102S1A0JD36 115 aa5.7□□□□□ -1.5
PDLIM1P3-201ENST00000582370 LRCOL1A6NCL2 159 aa5.7□□□□□ -1.5
PDLIM1P3-201ENST00000582370 DLEU1O43261 78 aa5.7□□□□□ -1.5
PDLIM1P3-201ENST00000582370 SPINK8P0C7L1 97 aa5.7□□□□□ -1.5
PDLIM1P3-201ENST00000582370 BOD1L2Q8IYS8 172 aa5.7□□□□□ -1.5
PDLIM1P3-201ENST00000582370 Q8N814 137 aa5.7□□□□□ -1.5
PDLIM1P3-201ENST00000582370 CAMK2N2Q96S95 79 aa5.7□□□□□ -1.5
PDLIM1P3-201ENST00000582370 SYCNQ0VAF6 134 aa5.69□□□□□ -1.5
PDLIM1P3-201ENST00000582370 Q6ZVH6 145 aa5.69□□□□□ -1.5
PDLIM1P3-201ENST00000582370 STPG4Q8N801 248 aa5.69□□□□□ -1.5
PDLIM1P3-201ENST00000582370 C15orf56Q8N910 161 aa5.69□□□□□ -1.5
PDLIM1P3-201ENST00000582370 FAM30AQ9NZY2 134 aa5.69□□□□□ -1.5
PDLIM1P3-201ENST00000582370 TOMM7Q9P0U1 55 aa5.69□□□□□ -1.5
PDLIM1P3-201ENST00000582370 KIAA0087Q14695 138 aa5.68□□□□□ -1.5
PDLIM1P3-201ENST00000582370 Q6ZSA8 131 aa5.68□□□□□ -1.5
PDLIM1P3-201ENST00000582370 ATOH7Q8N100 152 aa5.68□□□□□ -1.5
PDLIM1P3-201ENST00000582370 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
PDLIM1P3-201ENST00000582370 LINC00474Q9P2X8 69 aa5.68□□□□□ -1.5
PDLIM1P3-201ENST00000582370 NDUFA12Q9UI09 145 aa5.68□□□□□ -1.5
PDLIM1P3-201ENST00000582370 TIMM17BO60830 172 aa5.67□□□□□ -1.5
PDLIM1P3-201ENST00000582370 COX8AP10176 69 aa5.67□□□□□ -1.5
PDLIM1P3-201ENST00000582370 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
PDLIM1P3-201ENST00000582370 SPATA45Q537H7 98 aa5.67□□□□□ -1.5
PDLIM1P3-201ENST00000582370 ZNF625Q96I27 306 aaPredicted RBP5.67□□□□□ -1.5
PDLIM1P3-201ENST00000582370 PPDPFQ9H3Y8 114 aa5.67□□□□□ -1.5
PDLIM1P3-201ENST00000582370 A0A0J9YXY3 114 aa5.66□□□□□ -1.5
PDLIM1P3-201ENST00000582370 ZNF815PA8K554 130 aa5.66□□□□□ -1.5
PDLIM1P3-201ENST00000582370 TMEM238C9JI98 176 aa5.66□□□□□ -1.5
PDLIM1P3-201ENST00000582370 TSTD3H0UI37 97 aa5.66□□□□□ -1.5
PDLIM1P3-201ENST00000582370 TLX1NBP0CAT3 122 aa5.66□□□□□ -1.5
PDLIM1P3-201ENST00000582370 SCGB1D4Q6XE38 83 aa5.66□□□□□ -1.5
PDLIM1P3-201ENST00000582370 PAM16Q9Y3D7 125 aa5.66□□□□□ -1.5
PDLIM1P3-201ENST00000582370 NDUFC2-KCTD14E9PQ53 114 aa5.65□□□□□ -1.5
PDLIM1P3-201ENST00000582370 HIGD2BQ4VC39 106 aa5.65□□□□□ -1.5
PDLIM1P3-201ENST00000582370 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
PDLIM1P3-201ENST00000582370 SLC25A34Q6PIV7 304 aa5.65□□□□□ -1.5
PDLIM1P3-201ENST00000582370 C9orf163Q8N9P6 203 aa5.65□□□□□ -1.5
PDLIM1P3-201ENST00000582370 UQCR10Q9UDW1 63 aa5.65□□□□□ -1.5
PDLIM1P3-201ENST00000582370 LOC107984640A0A0U1RRK4 108 aa5.64□□□□□ -1.51
PDLIM1P3-201ENST00000582370 MEIG1Q5JSS6 88 aa5.64□□□□□ -1.51
PDLIM1P3-201ENST00000582370 C12orf57Q99622 126 aa5.64□□□□□ -1.51
PDLIM1P3-201ENST00000582370 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
PDLIM1P3-201ENST00000582370 HIGD1BQ9P298 99 aa5.64□□□□□ -1.51
PDLIM1P3-201ENST00000582370 ERG28Q9UKR5 140 aa5.64□□□□□ -1.51
PDLIM1P3-201ENST00000582370 IGKV2D-26A0A0A0MRZ7 120 aa5.63□□□□□ -1.51
PDLIM1P3-201ENST00000582370 IFITM1P13164 125 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms