RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 TMEM141Q96I45 108 aa7.27□□□□□ -1.25
SS18-219ENST00000581570 SMIM7Q9BQ49 75 aa7.27□□□□□ -1.25
SS18-219ENST00000581570 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
SS18-219ENST00000581570 PYGO1Q9Y3Y4 419 aa7.27□□□□□ -1.25
SS18-219ENST00000581570 V9GYV3 84 aa7.27□□□□□ -1.25
SS18-219ENST00000581570 TEX43Q6ZNM6 134 aa7.26□□□□□ -1.25
SS18-219ENST00000581570 Q8IZM0 81 aa7.26□□□□□ -1.25
SS18-219ENST00000581570 ALKBH7Q9BT30 221 aaPredicted RBP7.26□□□□□ -1.25
SS18-219ENST00000581570 NAT8BQ9UHF3 227 aa7.26□□□□□ -1.25
SS18-219ENST00000581570 D6R8Y8 96 aa7.25□□□□□ -1.25
SS18-219ENST00000581570 NPYP01303 97 aa7.25□□□□□ -1.25
SS18-219ENST00000581570 RAB5AP20339 215 aa7.25□□□□□ -1.25
SS18-219ENST00000581570 FP248Q71RG6 208 aaPredicted RBP7.25□□□□□ -1.25
SS18-219ENST00000581570 SLC51BQ86UW2 128 aa7.25□□□□□ -1.25
SS18-219ENST00000581570 C2orf88Q9BSF0 95 aa7.25□□□□□ -1.25
SS18-219ENST00000581570 EIF5A2Q9GZV4 153 aaKnown RBP7.25□□□□□ -1.25
SS18-219ENST00000581570 F8VRH5 84 aa7.24□□□□□ -1.25
SS18-219ENST00000581570 ZC2HC1BQ5TFG8 222 aa7.24□□□□□ -1.25
SS18-219ENST00000581570 SEC61BP60468 96 aaKnown RBP7.23□□□□□ -1.25
SS18-219ENST00000581570 PNRC1Q12796 327 aaPredicted RBP7.23□□□□□ -1.25
SS18-219ENST00000581570 KRTAP13-3Q3SY46 172 aa7.23□□□□□ -1.25
SS18-219ENST00000581570 FAM74A3Q4VXF1 159 aa7.23□□□□□ -1.25
SS18-219ENST00000581570 SPAG11AQ6PDA7 123 aa7.23□□□□□ -1.25
SS18-219ENST00000581570 A0A1B0GW15 77 aa7.22□□□□□ -1.25
SS18-219ENST00000581570 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
SS18-219ENST00000581570 IGLV5-37A0A075B6J1 123 aa7.21□□□□□ -1.26
SS18-219ENST00000581570 F8W036 122 aa7.21□□□□□ -1.26
SS18-219ENST00000581570 BLOC1S1P78537 153 aa7.21□□□□□ -1.26
SS18-219ENST00000581570 ANKRD39Q53RE8 183 aa7.21□□□□□ -1.26
SS18-219ENST00000581570 NKAPP1Q8N9T2 125 aa7.21□□□□□ -1.26
SS18-219ENST00000581570 VCX2Q9H322 139 aa7.21□□□□□ -1.26
SS18-219ENST00000581570 BATF3Q9NR55 127 aa7.21□□□□□ -1.26
SS18-219ENST00000581570 SMIM27A0A1W2PRY6 76 aa7.2□□□□□ -1.26
SS18-219ENST00000581570 PPBPP02775 128 aa7.2□□□□□ -1.26
SS18-219ENST00000581570 PRLHP81277 87 aa7.2□□□□□ -1.26
SS18-219ENST00000581570 AMELXQ99217 191 aa7.2□□□□□ -1.26
SS18-219ENST00000581570 IGKV2-28A0A075B6P5 120 aa7.19□□□□□ -1.26
SS18-219ENST00000581570 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
SS18-219ENST00000581570 IGKV2D-28P01615 120 aa7.19□□□□□ -1.26
SS18-219ENST00000581570 CXCL5P42830 114 aa7.19□□□□□ -1.26
SS18-219ENST00000581570 C2orf66Q6UXQ4 117 aa7.19□□□□□ -1.26
SS18-219ENST00000581570 FAM19A1Q7Z5A9 133 aa7.19□□□□□ -1.26
SS18-219ENST00000581570 ANAPC16Q96DE5 110 aa7.19□□□□□ -1.26
SS18-219ENST00000581570 S100A8P05109 93 aa7.18□□□□□ -1.26
SS18-219ENST00000581570 MRPL54Q6P161 138 aaKnown RBP7.18□□□□□ -1.26
SS18-219ENST00000581570 FAM19A3Q7Z5A8 133 aa7.18□□□□□ -1.26
SS18-219ENST00000581570 ORMDL3Q8N138 153 aa7.18□□□□□ -1.26
SS18-219ENST00000581570 PLEKHB2Q96CS7 222 aa7.18□□□□□ -1.26
SS18-219ENST00000581570 CDKN2A-AS1Q9UH64 79 aa7.18□□□□□ -1.26
SS18-219ENST00000581570 SCO1O75880 301 aa7.17□□□□□ -1.26
SS18-219ENST00000581570 SRP19P09132 144 aaKnown RBP7.17□□□□□ -1.26
SS18-219ENST00000581570 HERVK_113P63121 156 aa7.17□□□□□ -1.26
SS18-219ENST00000581570 SEC11AP67812 179 aa7.17□□□□□ -1.26
SS18-219ENST00000581570 TMEM136Q6ZRR5 245 aa7.17□□□□□ -1.26
SS18-219ENST00000581570 PRELID3AQ96N28 172 aa7.17□□□□□ -1.26
SS18-219ENST00000581570 CYSLTR1Q9Y271 337 aa7.17□□□□□ -1.26
SS18-219ENST00000581570 LOC389332A0A1B0GUA5 103 aa7.16□□□□□ -1.26
SS18-219ENST00000581570 RAB5BP61020 215 aa7.16□□□□□ -1.26
SS18-219ENST00000581570 RPL23P62829 140 aaKnown RBP7.16□□□□□ -1.26
SS18-219ENST00000581570 KRTAP4-12Q9BQ66 201 aa7.16□□□□□ -1.26
SS18-219ENST00000581570 GEMIN7Q9H840 131 aaKnown RBP7.16□□□□□ -1.26
SS18-219ENST00000581570 A0A1B0GXF2 115 aa7.15□□□□□ -1.26
SS18-219ENST00000581570 ADIRFQ15847 76 aa7.15□□□□□ -1.26
SS18-219ENST00000581570 ALKAL2Q6UX46 152 aa7.15□□□□□ -1.26
SS18-219ENST00000581570 CBLN2Q8IUK8 224 aa7.15□□□□□ -1.26
SS18-219ENST00000581570 TMEM126AQ9H061 195 aa7.15□□□□□ -1.26
SS18-219ENST00000581570 IGIPA6NJ69 53 aa7.14□□□□□ -1.27
SS18-219ENST00000581570 PRSS47A8MTI9 375 aa7.14□□□□□ -1.27
SS18-219ENST00000581570 TMEM238C9JI98 176 aa7.14□□□□□ -1.27
SS18-219ENST00000581570 NPSP0C0P6 89 aa7.14□□□□□ -1.27
SS18-219ENST00000581570 GNB1LQ9BYB4 327 aa7.14□□□□□ -1.27
SS18-219ENST00000581570 CFC1BP0CG36 223 aa7.13□□□□□ -1.27
SS18-219ENST00000581570 COX7B2Q8TF08 81 aa7.13□□□□□ -1.27
SS18-219ENST00000581570 MAP1LC3AQ9H492 121 aa7.13□□□□□ -1.27
SS18-219ENST00000581570 A0A1B0GVG6 124 aa7.12□□□□□ -1.27
SS18-219ENST00000581570 SMIM1B2RUZ4 78 aa7.12□□□□□ -1.27
SS18-219ENST00000581570 M0R378 163 aa7.12□□□□□ -1.27
SS18-219ENST00000581570 PDZD11Q5EBL8 140 aa7.12□□□□□ -1.27
SS18-219ENST00000581570 PAPPA-AS1Q5QFB9 102 aa7.12□□□□□ -1.27
SS18-219ENST00000581570 TCTE3Q8IZS6 198 aa7.12□□□□□ -1.27
SS18-219ENST00000581570 Q8N8P6 123 aa7.12□□□□□ -1.27
SS18-219ENST00000581570 DAND5Q8N907 189 aa7.12□□□□□ -1.27
SS18-219ENST00000581570 HIGD2AQ9BW72 106 aa7.12□□□□□ -1.27
SS18-219ENST00000581570 MT1HP80294 61 aa7.11□□□□□ -1.27
SS18-219ENST00000581570 ORMDL2Q53FV1 153 aa7.11□□□□□ -1.27
SS18-219ENST00000581570 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
SS18-219ENST00000581570 Q8NBF4 154 aa7.11□□□□□ -1.27
SS18-219ENST00000581570 SPRR4Q96PI1 79 aa7.11□□□□□ -1.27
SS18-219ENST00000581570 NAT8Q9UHE5 227 aa7.11□□□□□ -1.27
SS18-219ENST00000581570 LAMTOR2Q9Y2Q5 125 aa7.11□□□□□ -1.27
SS18-219ENST00000581570 SPINK1P00995 79 aa7.1□□□□□ -1.27
SS18-219ENST00000581570 VPREB1P12018 145 aa7.09□□□□□ -1.27
SS18-219ENST00000581570 KRTAP19-2Q3LHN2 52 aa7.09□□□□□ -1.27
SS18-219ENST00000581570 LCE3BQ5TA77 95 aa7.09□□□□□ -1.27
SS18-219ENST00000581570 NDUFA12Q9UI09 145 aa7.09□□□□□ -1.27
SS18-219ENST00000581570 ATP5L2Q7Z4Y8 100 aa7.08□□□□□ -1.28
SS18-219ENST00000581570 K7EMI3 77 aa7.07□□□□□ -1.28
SS18-219ENST00000581570 PFN2P35080 140 aa7.07□□□□□ -1.28
SS18-219ENST00000581570 RPL24P83731 157 aaKnown RBP7.07□□□□□ -1.28
SS18-219ENST00000581570 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms